Maet012607.1
Basic Information
- Insect
- Microctonus aethiopoides
- Gene Symbol
- -
- Assembly
- GCA_030347275.1
- Location
- JAQQBS010001424.1:4554462-4559680[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-09 1.2e-06 28.0 0.0 5 41 162 199 160 203 0.85 2 2 8.3 6.5e+03 -3.1 0.3 30 37 613 620 613 621 0.88
Sequence Information
- Coding Sequence
- ATGTCTGTCCGCGATGTGGCCAAATTATCCTGGATTGAGCGGACTCGAGAATTAAATCAGCCATTCAACTGTGGATGGAATAGAGGATTGATATCAAGAAGAGACATAAGACAAATGAGGTCACCGAGAATACGACGCAGCACCACTGAAAATATGTGTCCTATATGTAGAAAATCATTTGTCACCCCTGCTAATCTTGCGGCTCATAGACGAAGATATTGCGGTGTTGTTGCTAATATTAAATGCGGTCATTGTGACCATCGGGCAAAGCGAATGTGGGACATGAAAGTTCATCTCAGTGGAAATCATTGGATGAAGTATcagaaaaataagataaagTCGATGGGAACGGCAATCAGTCTTACTCGAGTGGATAAATATCACAGATCATTGGGATATGATCGTTTGGAGCGATGTCCGTACTGCAATTATCGGAGTACCAGGCCACGGAGACGTTATACAAAAATTCACCATCACTTGAGGATGCAACATGCAATGGATGTTGTGGTGCAAGGACTTATGTCATTGAGATCTGCGGAGAAGAAATTCAATATACCAAGAACAACACTACAGCGTTATATCAAGAAAGGAGAGTACAAGATGGCACGCTATGTAAACTACTCAAAGACAACTTATCCATGCCAGAACTGCCATAAAGTCTACAACTATTATTCGAGTTTGGCACGACATCTGAAACATGAGTGTGGCGTTGAACCAAGATTCCATTGTTCTCTATGTCCTTACAAGACTAAACACAGATCAAGCCTTAATACCCATCTCAATGGGAGACATATGAAGAGTTTAAATGACTTTTATATTACGTCAAGTCATAATGGTGGAAATATCATCGATAgaaaGCCAACGCTACAACATTATACCTATGAGACTCGTGCTTTTCATTGTCCACGCTGCTCGCGAAGTTACAAATACAAACGATCGCTTGCACGTCACTTGATCGTGGAGTGTGGAAAGGCACCGCAACTAAAGTGTCCTTATTGTCCTCATTGTAGCAAGTATCGAACGGACATATctaaacatattaaattaCGTCATGGCTTTGATCCTTGTTTTAATCCAATGGAGACGTCGTCATGGAGAATCAGTCGAATGCGCAGAATGCGAGGACAAGGATGGCACATGTGTGAAAATTGTGGTCGACGTTATCATCAATCGAAAAATCTCAAACGTCATTTACGTAATGAATGTGGAAAAAGACCGACTTATCAGTGCTCATATTGTCCATATAAAGCAACTTATAAATCTTATCTTGAAATACATATGACGAAACATGGTAGACATGATTTTACACCAAGAGTATCGTGTACAAATCCTTATGGCCAAGGATCaaAACGCAATTACAGCTCATCCAATTGGACTGTTCCAACTTTGCCACCATCGATATCAAAAGATAATATTTCAACTCGTCGTACCCGTTCCACCACTTTTGgcgatgattatttatttggtaatAAAGGACGAATGCGACGACTTGGTCcacgaaaatatttatgcacCGATTGTGGTAATACATTCGCTCTAAAAGCATCATTAACGCGTCATCAATCGTTAGAATGTACTCGAGAAATGGCTTTGGATTCAAAGCCCAAGACTACAAAACAACTAAAAACATCAGCGAAGACAATTAAACCATTGATACCAAAAGTAATGAAGACATCAGCtcctaaatttatattaccgAAAGTTTCATTGCCAAAAATAATGGCatcaaaatcatcaattaaatcaGATTCTGATCAACGATTATCATTCAAATCAAAATCAGaatctaagaaaaaaaaacatatgtgCAAACGTTGCGGTCGAGATTATGCATTCTACACATCATTGTGGCGTCATCTTCATTATGAATGCGGCATGGAACCAAAATTTACATGTGAAATATGTCGGTTGCGTTTTGCACAAAAAAGTAATCTTGAGCGACATATGAGAAATATGCATTCATCGGCGAATATAACTTTACCTTGA
- Protein Sequence
- MSVRDVAKLSWIERTRELNQPFNCGWNRGLISRRDIRQMRSPRIRRSTTENMCPICRKSFVTPANLAAHRRRYCGVVANIKCGHCDHRAKRMWDMKVHLSGNHWMKYQKNKIKSMGTAISLTRVDKYHRSLGYDRLERCPYCNYRSTRPRRRYTKIHHHLRMQHAMDVVVQGLMSLRSAEKKFNIPRTTLQRYIKKGEYKMARYVNYSKTTYPCQNCHKVYNYYSSLARHLKHECGVEPRFHCSLCPYKTKHRSSLNTHLNGRHMKSLNDFYITSSHNGGNIIDRKPTLQHYTYETRAFHCPRCSRSYKYKRSLARHLIVECGKAPQLKCPYCPHCSKYRTDISKHIKLRHGFDPCFNPMETSSWRISRMRRMRGQGWHMCENCGRRYHQSKNLKRHLRNECGKRPTYQCSYCPYKATYKSYLEIHMTKHGRHDFTPRVSCTNPYGQGSKRNYSSSNWTVPTLPPSISKDNISTRRTRSTTFGDDYLFGNKGRMRRLGPRKYLCTDCGNTFALKASLTRHQSLECTREMALDSKPKTTKQLKTSAKTIKPLIPKVMKTSAPKFILPKVSLPKIMASKSSIKSDSDQRLSFKSKSESKKKKHMCKRCGRDYAFYTSLWRHLHYECGMEPKFTCEICRLRFAQKSNLERHMRNMHSSANITLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01000801; iTF_01001622; iTF_01001186;
- 90% Identity
- iTF_01000801; iTF_01001622; iTF_01001186;
- 80% Identity
- iTF_01000801;