Basic Information

Insect: Microchrysa polita
Gene Symbol: -
Assembly: GCA_949715475.1
Location: OX454418.1:107581539-107591283[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.6e-05 0.0057 18.2 2.9 1 23 446 468 446 468 0.98

2 18 1.4e-05 0.0014 20.1 0.4 1 23 474 496 474 496 0.97

3 18 7.6e-05 0.0077 17.8 1.7 1 23 502 524 502 524 0.98

4 18 8.2e-05 0.0083 17.7 3.6 1 23 530 552 530 552 0.97

5 18 0.00035 0.035 15.7 4.9 1 23 558 580 558 580 0.98

6 18 0.00013 0.013 17.1 5.7 1 23 586 608 586 608 0.97

7 18 5.9e-07 6e-05 24.4 4.3 1 23 614 636 614 636 0.98

8 18 2.2e-07 2.2e-05 25.8 2.4 1 23 642 664 642 664 0.97

9 18 0.0003 0.03 15.9 5.7 1 23 670 692 670 692 0.97

10 18 0.00012 0.012 17.2 6.4 1 23 698 720 698 720 0.98

11 18 3.2e-05 0.0032 19.0 4.7 1 23 726 748 726 748 0.98

12 18 2.3e-05 0.0024 19.4 7.1 1 23 754 776 754 776 0.98

13 18 1.7e-06 0.00017 23.0 7.2 1 23 782 804 782 804 0.98

14 18 0.00025 0.026 16.1 9.1 1 23 810 832 810 832 0.97

15 18 0.00041 0.042 15.5 9.5 1 23 838 861 838 861 0.95

16 18 0.00021 0.021 16.4 0.4 1 23 867 889 867 889 0.97

17 18 0.0021 0.22 13.2 3.3 1 23 899 921 899 921 0.98

18 18 6.5e-06 0.00065 21.1 1.6 1 23 927 950 927 950 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.6e-05	0.0057	18.2	2.9	1	23	446	468	446	468	0.98
2	18	1.4e-05	0.0014	20.1	0.4	1	23	474	496	474	496	0.97
3	18	7.6e-05	0.0077	17.8	1.7	1	23	502	524	502	524	0.98
4	18	8.2e-05	0.0083	17.7	3.6	1	23	530	552	530	552	0.97
5	18	0.00035	0.035	15.7	4.9	1	23	558	580	558	580	0.98
6	18	0.00013	0.013	17.1	5.7	1	23	586	608	586	608	0.97
7	18	5.9e-07	6e-05	24.4	4.3	1	23	614	636	614	636	0.98
8	18	2.2e-07	2.2e-05	25.8	2.4	1	23	642	664	642	664	0.97
9	18	0.0003	0.03	15.9	5.7	1	23	670	692	670	692	0.97
10	18	0.00012	0.012	17.2	6.4	1	23	698	720	698	720	0.98
11	18	3.2e-05	0.0032	19.0	4.7	1	23	726	748	726	748	0.98
12	18	2.3e-05	0.0024	19.4	7.1	1	23	754	776	754	776	0.98
13	18	1.7e-06	0.00017	23.0	7.2	1	23	782	804	782	804	0.98
14	18	0.00025	0.026	16.1	9.1	1	23	810	832	810	832	0.97
15	18	0.00041	0.042	15.5	9.5	1	23	838	861	838	861	0.95
16	18	0.00021	0.021	16.4	0.4	1	23	867	889	867	889	0.97
17	18	0.0021	0.22	13.2	3.3	1	23	899	921	899	921	0.98
18	18	6.5e-06	0.00065	21.1	1.6	1	23	927	950	927	950	0.97

Sequence Information

Coding Sequence: ATGAATACGGCAGATCGATCGGTGGGACACGACAATCAGGGCCCAGAGTCGCAGATTCGTCAGTCGTCGCAACCGCAATCTCAGCAGCAGGCGCATCCCCAACAACAAGCGCAACACCCCCAACATTCTCGTCACATGCATCAACAGCAAATCGACGAGCAAAATCgtcaacagcagcagcagcaacaacagcaacagaACCAGCATCAACATCAGCCCCAGGGTGGCGGGCATCCACAGGACCAACAACGAATCGGGGGTGTAATCCAACCTGTGAGTGAAGCAGATCTGAAGCATCCCTTGCCGTTGGCCAATGCACCGCATCTCGGCAAGTACTGGGTCGTTACAAATCTTTTCCAAGGTCCTGGTCAAAATGCTACGACCTACAATGTTGCAACCGGTCAGCCAACATCATCGGCCGGTGTCGTCATACCAACGACACAATCCATACAATCGCACACTACGATCAAATCGGACGCGACAATTAAGCAAGAAGAAGCAGCTCACATTGCCAATATCCATCAGCAGGGTCGTATACAACAGCAAATTGTTACGGTCAGTGCACCAAACACAATCCAGATACCAAATTCAATGATTGTCACGCAACAAGGATCGCAACAGATCACAAACGCTACACTCATACAAACTGGCCAGCCGCCCGAGCACATTCAGGTGGCGGTGAATCCGGAAAACAGTATTATGATAATGGACACAACACAAGCTtccaataaaaatgataaaattcttacaaaccaaaatatgaacgTCAACGAACCAATGCAGGGCATTGAACGGGTCAAGGAGGAGAAACCATTCGCCAATTGCAAATTGCTACCgcatcaacagcaacagcagcaacaacaacaacagcaaatgCACGCCCAACAAACTACGTCCGATCAAAAGATGCACATTCCGCATCTGTTGGACGTGCGAAATGCCGACGGTTCGCTGATCAAGATTCAGCCGCAGGATCAGGAGATGGGCAAACAGTTGGGCGTGGAAATGTATAAAGTGAATATCGAAGATTTGAGCCAGTTCCTGTCATATCATGaagtttttggaaaattacacGGCGGCGACGTTATTACACATCCAATTTCGCATTCGGGTACGCATGTGGTGAATACGATAAGCAATGCCCCGGTGGCGGCTACCGTGAAAACTACTTCGGCTACGAACGTAGTTACGTCTGGTGCGAACATAACGACAACTACGGGCGAGTTGTTGATgccgaaaatggaaaatatCCCTCAAATGACAGGAGTGAATCAGGTGCCGGGCACAACTGCCACTCTAACGAATGCCGATGGAACGACCATAACACCCGCCACACATACGTGCGACATTTGCGGTAAAATGTTCCAATTTCGCTATCAGCTAATTGTCCATCGACGATATCATAGCGAACGTAAGCCATTCATGTGTCAGGTGTGCGGTCAGGGATTCACCACGTCCCAGGATTTGACGCGACATGGTAAAATTCATATTGGCGGTCCGATGTTTACGTGTAACGTTTGCTTTCATGTGTTCGCCAACGATGCGAGTTTGGAGCGTCACATGAAACGACATTCGGCCGATAAGCCGTTTGCATGCACTATGTGCCAGAAGACGTTTGCCCGAAAGGAACATTTGGACAACCATTTTCGCAGTCATACCGGCGAAACACCGTTCCGTTGTCAATTCTGTGCTAAGACGTTTACGCGCAAAGAGCACATGGTCAATCATGTTCGCAAGCATACGGGCGAGACGCCACATCGTTGCGATATTTGCAAGAAGTCATTCACGCGAAAGGAGCACTACGTCAATCATTATATGTGGCATACAGGTGAAACACCGCATCAGTGCGAAGTGTGCGGCAAGAAGTATACTCGCAAGGAGCATTTGGCCAATCATATGCGCTCGCACACAAATGACACGCCCTTCCGTTGCGAGATTTGCGGAAAGAGTTTCAGCCGTAAGGAGCATTTCACAAATCACATATTGTGGCACACCGGCGAGACACCCCATCGTTGCGATTTCTGTGCGAAAACATTCACACGAAAAGAGCATTTGTTGAATCATGTGCGACAACACACTGGCGAATCACCACATCGTTGCACATATTGTCTGAAGACATTTACGCGAAAGGAACATCTCGTCAATCATGTACGGCAGCATACCGGTGAAACGCCCTTCAAGTGTACATTCTGCACAAAAGCATTCACCCGCAAAGATCACATGGTCAATCATATTCGTCAGCATACGGGTGAATCGCCGCACAAGTGTACATACTGTACCAAAACGTTCACGCGCAAGGAGCATCTTGTCAATCACGTGAGACAGCATACTGGCGAATCGCCGCATCGTTGCTCGTACTGCAATAAGACATTCACCCGAAAGGAGCACTTGACCAATCATATCCGCTTGCATACGGGCGATTCGCCGCATAAATGTGAATGTTGCGGAAAGACATTCACGCGCAAGGAACACTTGAATAATCACATGAAACAGCACTCGAGTGACAATGCACATTGCTGTAACGTTTGCAATAAGCCGTTCACTCGCAAGGAGCATTTGATAAATCACATGTCACGTTGCCATACTGGAGATCGACCATTTGCATGTGAAACGTGTGGAAAGTCCTTCCCACTCAAGGGCAACTTGATCTTCCATCAGCGAAGTCATACCAAGGGCCAGGACGTTGAGCGACCATTCCGTTGTGAGAAATGCCCCAAGGATTTCATTTGTAAAGGTCATTTGGTATCACATATGCGCGCTCATTCTGGCGAGAAGCCGCACGTTTGCTCGCTGTGCAGTAAAGCGTTTGTTGAGAAGGGCAATCTGAAGCGACACATGAAAATGAATCATCCGAACGTTATTATTCCACCGTTGGGTCTGGTTACAAATATCAAAACCGAAGCCAATCCGAATCCGACCACGGTGACTACAGTTGTTTCGCAATACAACACAATTAAGACGGAAGCCAATCCTACCACTATGGCCACGGCTCCACAATACATGAATGAAAGAATCCAATTGCTGACGAAAGCCAATCTGCTACCGATCAATCCGTTGATTCCTCACCAAGCGCCTACTATGCATACAATTCAGCAAATAACTGCTACGTCGGCCAACTCTTCAATTAACAACACTAGTACGCTATCGGGTCCGACCGGATTGGTGCCGATTGTCACTTCTACGATTACATCACATGTTAgtcagcaacagcagcagcaacaacaacaacaacagcagcagcatgtaTCTGCAGCGCAGATGCAACAACACGCCCAACAGCAACAACAGTCTCAACAGCAACAAGGACAACAGCAAAACAATCAACAACCCGGCGATCCAACACAAACTGTTCCCATTGCAATTATACAGGCCGGCGATCCTGCCACAATCACGCGAGCTTCGATTCAGCTTCAACATTTGCCGCCAGGAGTTGAGCACCATTCAGTCGTATATTAG
Protein Sequence: MNTADRSVGHDNQGPESQIRQSSQPQSQQQAHPQQQAQHPQHSRHMHQQQIDEQNRQQQQQQQQQQNQHQHQPQGGGHPQDQQRIGGVIQPVSEADLKHPLPLANAPHLGKYWVVTNLFQGPGQNATTYNVATGQPTSSAGVVIPTTQSIQSHTTIKSDATIKQEEAAHIANIHQQGRIQQQIVTVSAPNTIQIPNSMIVTQQGSQQITNATLIQTGQPPEHIQVAVNPENSIMIMDTTQASNKNDKILTNQNMNVNEPMQGIERVKEEKPFANCKLLPHQQQQQQQQQQQMHAQQTTSDQKMHIPHLLDVRNADGSLIKIQPQDQEMGKQLGVEMYKVNIEDLSQFLSYHEVFGKLHGGDVITHPISHSGTHVVNTISNAPVAATVKTTSATNVVTSGANITTTTGELLMPKMENIPQMTGVNQVPGTTATLTNADGTTITPATHTCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCNVCFHVFANDASLERHMKRHSADKPFACTMCQKTFARKEHLDNHFRSHTGETPFRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHVRQHTGETPFKCTFCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLVNHVRQHTGESPHRCSYCNKTFTRKEHLTNHIRLHTGDSPHKCECCGKTFTRKEHLNNHMKQHSSDNAHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLIFHQRSHTKGQDVERPFRCEKCPKDFICKGHLVSHMRAHSGEKPHVCSLCSKAFVEKGNLKRHMKMNHPNVIIPPLGLVTNIKTEANPNPTTVTTVVSQYNTIKTEANPTTMATAPQYMNERIQLLTKANLLPINPLIPHQAPTMHTIQQITATSANSSINNTSTLSGPTGLVPIVTSTITSHVSQQQQQQQQQQQQQHVSAAQMQQHAQQQQQSQQQQGQQQNNQQPGDPTQTVPIAIIQAGDPATITRASIQLQHLPPGVEHHSVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01376054;
90% Identity: iTF_00793687;
80% Identity: -