Basic Information

Gene Symbol
lilli
Assembly
GCA_949715475.1
Location
OX454418.1:68424275-68445684[-]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 2.1e-07 0.0085 16.6 11.8 6 220 5 202 1 236 0.48
2 7 4.9e-11 2e-06 28.5 15.7 334 512 234 403 229 405 0.71
3 7 1 4.1e+04 -10.2 16.3 141 275 494 628 419 639 0.42
4 7 1 4.1e+04 -14.2 34.5 426 481 737 798 717 812 0.40
5 7 1 4.1e+04 -12.1 20.6 72 205 849 980 839 1076 0.45
6 7 1 4.1e+04 -7.8 9.3 125 199 996 1068 940 1156 0.35
7 7 0.085 3.5e+03 -2.0 1.8 361 406 1250 1297 1209 1330 0.72

Sequence Information

Coding Sequence
ATGGAGGATTGCAGACGTATGGAAAAACGGGAACGTGACAAAAGGGCACGACAGCAAATTCAAAATACACGACCCGAAGCATCGTTGTTTCCGGAACCAGTTCGAGTCGAAGGTGACTCCTCCATCGATTCGAAATTGGGCGACTATGATGCCGCTCGTAGTCTATTCCTTGAGCCTAAACAGGCACGTATTATCGGCATCACAACATCAGTCACAAATACCCCACAACCACCGGTGCAACGAATACCGCCGCCTCAGCAACAACCTTATCCGGTTGTTGGTCTAGGTTCCTCATCGACATCATCATCCGGCTTTGCACCGCCACCGTCACAAAACAATCGTATTGTCCCGCCCTCTTCGTCACATCGCTATCATCCACCGCATACGTCGTCGCTCTCGTCAtcacagcagcagcagcagagtCGAAATAGTAGCAGCGGAACCTACTTAAAACAACTCGACCCCAAAGTTACGCACAATGGCCGCTATCCGGCTCCACCAAACAAACATGACACCCATCAAAAAAGCAGTGGTGGTAGTAGTGGCCTGGGGCCACCTCAACCGCCTCAAAGTTCGTCCGCCATGATGCCGAACGGTCGACTGTCGAATGACAAAGTTGTAGGTAGCTCGGCGAACAATACTACTAGCGGATCAAATCCTAATGGGCGATTTCAAGTTCCTCAAGCGCCGCCCAAGCAACATAGTCGCTACATAGAACCGCCATCTCCGTCGCGCGTTGGCGATGTCGATTCTATATTGAAGGAGATGACAAGACCACATCAGCCCTTGACGTTGATAGCGGCGACACCTCGCAaagaatttgaaaataaattcagTTTCGGTCAGAAGAATAATCACGTATATGCCTCATTGCCCCCTGCGTTAACGGATACATTAACGAGACAACGCGATAAAACTTTTAATGTGCCTACATCGAAGCTCGAAAATGATCTAGAATTATCCGAGAGCGATGATGACCACAAGAAACAAACGTCTACCGGACGTGCCTCTCCTACGAATGACAATTCGAGCGACAGTTCAGATTCCGGTTCTAGCGACTCGGAAAGTGAAGAATCCACGATCGGCGCACGTCAAGGCGGTGGTGCTGATGCCAATAACCGTaagttgacaaattgcaaccggGTAGAAGAGTCTGCGATAGCATCGGGTAGTGTGCCAGAGACAAATGCTTGGAATTTGAGCAAATACTTTCTCAAGGAAAAATCTGTCGGTCTCGATGGCGGTTGTCACGATAATATTAAGCATGAGCCACCGAATCGTTTAGACGATAGCTCATCGCCAGCACCGTCGCCGACAACATTTACACGCCACGAGATCATCACTCCAATCAATCCAATTTCACCCATTGACATTAAGACAGAAAGTTTGGCGCAGGATTTCAGCAAGGCAAATAGTAATAATAATTGTTTACAACTTCAGCCCGATCAAATCAAAAGCGAAACTTTCGAGAAAAGTCCGTCAAGTAGCCCGGAAAAAGTCCAGCACTCGGACACAGTCGAGTCAGATCAAATCGAAAGTGTTTTGGCCGAAGCAAAAGGTTTGGCCGAAATCAAACCGGTGTCGGATCTGGGTTCGAGTTCCGATGCGGACGATACGAAACCAAAACCTCTACCCTTGCCGGTTAGCAAATCGCCGGCTAAGAAGCCGGTGAAGCGCAGGCGAAAAGTACAAAAAGACAAAAAGATCCCTAACAGTGATTCGAGTGATGAGGATTGTGATTTATCAAGTGCAAATAATTTGTCCGATCGCAGTCGCTCTGTTGAGAAGGAGAAGAAAGGTCGCGGCCGGCCCCGCAAAAACCCTGTCGCTGCTCCATCAACAGTGTCGACTAACAAATCTCCGGCAGTGACGCCCGTCAAAAATGCATTGGCTAACAAGCGCGATCCAGCTGTCCGAAAGGGCGGTCCAGGACGTAGAACATCACGACAAAATTCCACGGCCATTCCCATAAGCCGGGAAATTTTGGAAACTACTACAGATTCATCGTCGGATGATGATCGACCGCCGCCAACGAAATCATCGATTCTACCGTCACCCACATTGTCCGCTTCGGCACAAGTTATTCCAGCAAAACTTGCGGAAATTGGCAGTAGAGGAGGCAGTGCTTCAGGCGTACCAGTCGTAAAGCCTCACACAAAAGTTGATAACAATGTGTCGGTAGCCACGTCAAAGTCGagcgatgatgatgacgacgacgatgatgacgacgatTCGTCCAGTTCATCAGATAATAGCGATGACGAGCGAGTACCGTCATTGCGCGATCGAGCATCACCTCGCCAACAATCCCTATCGGAACATCACAGTTCCTCACCAAGTCATCACTCCACATCGTCGTCTAGTGAAGATCATTCCGATAGCGATAGTGAATCACCTCCGCGGGAGGACAAGAAAATTCGTGACAAAACAAAAAGTGATAAACTCAAAAGTGATACTTTACGTAAATTATTTATTGGTTCAAATCGAGGAGAGGGCGGAGCCAAAGGAAAAGGTCAAGTGCTTATTGTTGATCAGTCGGAGGAGTCGCAAAATCATCCCGCAAAGGATGCCCCACCAATTCATCACGAGAAAATTTTATCGCCCATTGCCTTTAAGCAACACaataacaacaataataatagcAACAGTAACAATGATATGCAGCCAGTTCCATTGACGCCCACATCGAACATAACAACGACAAGCAATCATTTGAAATCCCCGCGAACATCGGCAGCAGCCGTCTTGATTGGCGGCACGACGCCAACCTCGGGAAATGCCGTATCCTCTGTCAGCAGCAATAATACGAGCAATAGTAAATCACCGGCGCTTCGGACCCCGGAACGGATGCCTGCAATGAGTATAAATAGTAAAATTCATAGTGTTAATAACAATAGTAACGTTAGCAATAGCAATGTACACACCATAAGTTCGCCAATTATTTGTCGAATTGATTTGTCCCGGGTGCAAATACCAAAGGCATGGCTACAGAACTCGCAACGAATGCGGGACAATACTAGCAATTCGAATGGCTCCACCCAAATCCAAAGTGCTCCTCATAGTGATGATGATCGATTAAGAAGTCCCAAATTGCCGCTTACGCCCCGGTGTGGTACCAATAGCAGCAGTAAGCTAAATCACAAAATATTGGATAGCGGCGGCAGTGTAAACAGTAGTCCTAGCATGAATTCAAGACTGGTAAATAGTGATTCGATAGGAAATCAAATAGCTACAACGGCCTCGTCGCCGGTGTCTTCGCGATATGGAGACGGAGGCGGCCTAAACAGTAAGAACAATTACAACGTAGATAACGTAGGAAAGGGGCATAGTAATGTCCCAAATTACCCATACAATGTAGATAATCATCGTCTGTCAAACAACAATTCGGATCGGTTGAGTCCCGCCCTACAGCCACCCATGACTCAGTTGCATCCATCGTTGGTTTCTCCCAAACGTGAGCTTTTCCTTCATGCCGCCGCCCAAATGAATTCCAATTCGAGCGGTAGTATTAAGCACGAGCCCATCAAATCCGAGTTCACAACCGACGAATACATGAGTTCAAAGTCACAGACGCTTCTCGAAAACAAATGCAACCTCTACAATAATCCCAAGCTGGTGGGACGTAACAATAACGTGATCGTCAAGACGGAatgtaaaaatttatttattggcAACGATTGTGATCGCTCGAATCAAACACAAGCATCACCAATTGATCCGATTGGAGGTGGTGCCCACGGCACCGTACCGCCTCCAATGACAACGATCAATGCGGCCGCTTTAAGGGCGCTATCGCCCAGTGATGAGCCTATTCCAAAGAATCGACGTAAACGCAGCTCAAGTTCGAGTAGTAGTCCGTACAAGGAGAAAAAGAGGAAAAAGACGACGACTGGTGCACCGCTTCAGAACGAAGCCTTCGAACAATTACCCCCCACAAATCACGATCGGTTATCCGATAAATATTCACCACCATCGCCTATCGTCCAGACAGTGTACAAGTCATACTTTGAACGTGAAGGCGATGATGCGATATCAGGCCAAGACCAAGAGGTATACCTCCAAGAAGCAAAACGTCTCAAACATTTAGCAGATCGCGAGAGCGGTCATTTCAATCAGGTTGCATTGTATTTGAAGGCTGTATTATATTTTCTATTGTCGGCGACACGTATGGAACAAAGCGATCGAATTCCCTCGGCATTTACAATATACAAGGACACATTGTCACTAATCAAATTTATATCGTCGAAATTTATTATGCATCCACCCCAGCATGGTATTGACAATACTAATAAGGTGTCGGTATTAAGtcTGCGTTGTCAATCGTTGATTTCACTCAAACTCTACACCTTGAAGCGCGGTGAAAGCAAAGAGGCCCAAAAAACCATCTCACATTTCATCAATAAAGCTCCCGAAATCATTAACGGTAACACGCCATCGATTTCACCCAGTTCAGTATCATCGCTTGGCTCTGGTTCGAATACGCCGCCACTACATGTAGTTCCAGGACGATATCCATCGGTGCATCACTTTCCAAAATATTCGGCGGAAACAACATATCCATTTGAGGTGCATGCAGCGTACCAAAAACAAGCTCTCGCATTTAATTATCTATCGAGTGCACATGAACTATGGGAACAAGCGGACAATATAGTTAAGAAAGGAAATCACATGGACTTTTTCATCGATCTGGATCGTGTGAATGGACCACTGTCATTACACAGCTCAATGTATGAAATATTTAAGTACGTTCAGTATGGTTTGCAGAAACTCAAGGAAATGTGA
Protein Sequence
MEDCRRMEKRERDKRARQQIQNTRPEASLFPEPVRVEGDSSIDSKLGDYDAARSLFLEPKQARIIGITTSVTNTPQPPVQRIPPPQQQPYPVVGLGSSSTSSSGFAPPPSQNNRIVPPSSSHRYHPPHTSSLSSSQQQQQSRNSSSGTYLKQLDPKVTHNGRYPAPPNKHDTHQKSSGGSSGLGPPQPPQSSSAMMPNGRLSNDKVVGSSANNTTSGSNPNGRFQVPQAPPKQHSRYIEPPSPSRVGDVDSILKEMTRPHQPLTLIAATPRKEFENKFSFGQKNNHVYASLPPALTDTLTRQRDKTFNVPTSKLENDLELSESDDDHKKQTSTGRASPTNDNSSDSSDSGSSDSESEESTIGARQGGGADANNRKLTNCNRVEESAIASGSVPETNAWNLSKYFLKEKSVGLDGGCHDNIKHEPPNRLDDSSSPAPSPTTFTRHEIITPINPISPIDIKTESLAQDFSKANSNNNCLQLQPDQIKSETFEKSPSSSPEKVQHSDTVESDQIESVLAEAKGLAEIKPVSDLGSSSDADDTKPKPLPLPVSKSPAKKPVKRRRKVQKDKKIPNSDSSDEDCDLSSANNLSDRSRSVEKEKKGRGRPRKNPVAAPSTVSTNKSPAVTPVKNALANKRDPAVRKGGPGRRTSRQNSTAIPISREILETTTDSSSDDDRPPPTKSSILPSPTLSASAQVIPAKLAEIGSRGGSASGVPVVKPHTKVDNNVSVATSKSSDDDDDDDDDDDSSSSSDNSDDERVPSLRDRASPRQQSLSEHHSSSPSHHSTSSSSEDHSDSDSESPPREDKKIRDKTKSDKLKSDTLRKLFIGSNRGEGGAKGKGQVLIVDQSEESQNHPAKDAPPIHHEKILSPIAFKQHNNNNNNSNSNNDMQPVPLTPTSNITTTSNHLKSPRTSAAAVLIGGTTPTSGNAVSSVSSNNTSNSKSPALRTPERMPAMSINSKIHSVNNNSNVSNSNVHTISSPIICRIDLSRVQIPKAWLQNSQRMRDNTSNSNGSTQIQSAPHSDDDRLRSPKLPLTPRCGTNSSSKLNHKILDSGGSVNSSPSMNSRLVNSDSIGNQIATTASSPVSSRYGDGGGLNSKNNYNVDNVGKGHSNVPNYPYNVDNHRLSNNNSDRLSPALQPPMTQLHPSLVSPKRELFLHAAAQMNSNSSGSIKHEPIKSEFTTDEYMSSKSQTLLENKCNLYNNPKLVGRNNNVIVKTECKNLFIGNDCDRSNQTQASPIDPIGGGAHGTVPPPMTTINAAALRALSPSDEPIPKNRRKRSSSSSSSPYKEKKRKKTTTGAPLQNEAFEQLPPTNHDRLSDKYSPPSPIVQTVYKSYFEREGDDAISGQDQEVYLQEAKRLKHLADRESGHFNQVALYLKAVLYFLLSATRMEQSDRIPSAFTIYKDTLSLIKFISSKFIMHPPQHGIDNTNKVSVLSLRCQSLISLKLYTLKRGESKEAQKTISHFINKAPEIINGNTPSISPSSVSSLGSGSNTPPLHVVPGRYPSVHHFPKYSAETTYPFEVHAAYQKQALAFNYLSSAHELWEQADNIVKKGNHMDFFIDLDRVNGPLSLHSSMYEIFKYVQYGLQKLKEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-