Basic Information

Insect: Micraspis discolor
Gene Symbol: AAEL004458
Assembly: GCA_030674115.1
Location: JARTUT010001779.1:232899-237095[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.7e-05 0.27 12.8 0.1 23 54 189 220 185 220 0.93

2 4 0.0028 46 5.6 0.0 21 44 243 266 235 272 0.90

3 4 0.16 2.7e+03 -0.0 0.0 26 43 304 321 295 330 0.87

4 4 0.0013 21 6.8 0.1 26 50 332 356 328 359 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.7e-05	0.27	12.8	0.1	23	54	189	220	185	220	0.93
2	4	0.0028	46	5.6	0.0	21	44	243	266	235	272	0.90
3	4	0.16	2.7e+03	-0.0	0.0	26	43	304	321	295	330	0.87
4	4	0.0013	21	6.8	0.1	26	50	332	356	328	359	0.89

Sequence Information

Coding Sequence: ATGGAATCCGAAATCTGCCCACAGTGCAAGGATGTGGTTGAAGCTACTTCGAAAAGAATAATAAAAGATTCGTGCGGACATGAGAAGTGTAGAGTTTGCTTATTGCAAGATGTGGATTGTTGCCGACAATGTGTAGAAAATGACATGAAACGGGGAGTAGAAGAGAATATATTACTAGAAAAGAGCGACTGTCCTAATGAAAATAATCATGCAACAGTCATAACTTGCAGTAAACTACTTCAAACTATCTTGATCGAAGAACAAGACCGTAAAGATTCAGGTGAAGATGACAGAAAAAACAAAGAGGACTCCGGAAAAATAAAACTTAAGCCTTCACAAAAGCGAAGATATGAAATGATTACAATGCCAAGTCATATAAATACTGAAGGATCACCTCCTGTGTTTTTTTGTACTATTTGTAAGGCTAAATTTAAAACGAAAGGTCATGTCAAGTATCATAAATTTTGTTTAGGAGAAAGTAAACCACATATATGTGGAGTTTGTAGTAAGTCTTTCATTTTGAAATCTCAACTCAACGTTCACGAATTAATTCATACTGGAAAGAAGCCGTACAATTGTAAATTATGCGAGAAAGCTTTTCGAGAATCAGGAAAGTTAAAACGTCATATGGCCCTTCATAGTTATGACAAACCACATGTCTGTGATGAGTGCGGTAAAAATTTTAAGACTCTCAGTTCTCTAAGAAATCATAGGATAATACACTCTGGAGAAAAACCGTTTTCTTGTAAATATTGcaaaatgaaattcaataattcgtctaatttgaagaaacacTTATTGGCTCATTCTGAGGATAAAACGCACATGTGTGAACAGtgtggaaaaaaattcaaacaaaaatggGCTTTGACTGTACATTGTAGATCTCACATGCTCAAAAGAGATTTTGTATGTAAAATCTGTAATAAGACGTTTGTAAACAATAAAGATCTCAAGCGGCATGAAACAGTTCACTTAGATGTCAAAATTTACTCGTGTGGAATATGTTCCATGTcttttaggagaaaagataatTTAGGGAGGCATCTAAGAAATGCTCATACCGATAAAGAACCCCAAATAATCAAAAAAGAAGTTGAACATAGGGAAACAGTAAGATCGACAGTTGCAGACAACCCTAATGCAATAAATGTTATAACATCTTTCCCGATGACCACCAAAAACACAGACATCAACAATGGTACTACCAGAACATGCATGAATGGTCCTCTCAAACTTGCCTTTAAGACTTCAGCATTCAAGAAAAATTACAATAtcaatagAGATCATCCTTACGAATCTAATAATACAAACGAGGTAGTAAAAAATATTGAGCAGACTTCAACTAAACCAGTTACAAAAGTTGCGCCTCCTTTGATTTTTCCAAGTGTGTATGCAACACAGGGTTTTAACGTTGACGAATACTACGCAAATAGACCacatataatcaaaaatatcaagttTAAAATACCTACCAACTATCCACCAGAAAATGAGGGGTTGGAACAGGTGAATGTTGCACTTGTATCCTGCTCAGAAGAAAATAGGCAAGAACTTCTGTCCCTCAAACATTCCCTTGAAGAATTGCTTGCATTGACCTGTGATAATGATTCAAACTTGGCTGAATCTCATTATCAAAATGATACTGTTGATGACAAGTACGCCCAATTCATGGCCGAAATAAACGAAGTTTCTCAAACTGGTTCGAAATTACCTAAAAATGATAGTTCGGATACATCTAATCTACAAGAATTGGAAGGAAAGAAGTGTCGTGCTCctcatgtaaataaatggggTAGTAAGGGATATCACAACGCCATGATTTGTTCAGTTTTTCCATCCAGCAGTAATAATGACGATTCCCAAGTAAGAGTGCTATTTGTTAACCCAATTCATGAAGAAATGTTACCATGTCCATATTACTTCGAAACAGACTGTAAATTCTCCGATGAGAAATGTAAATTTTCTCATGGTGAAATTGTACCTGCATCTGATATACAAGATTATGTTGAGCCTGATTTTGGTACTTTGGAGATTGGAAGTCCAGTTTTAGCCAAGCAAAGCAACAAACTATGGGGACGAGCTAAAATAACTAGTATTTTTGAAAATACTTGTATGGTTAAATTTGAAACTCTAAAAAAAGATATGGAGTTACCTTTTAAAGAAATATTACCGATGGAAGATGATAAAGCCAATAGTTTGAATGTAAGTGACGACGATTCAAGTGGAGAAATGCGGTATGACCAAGATGTTGTAAATATGAGCTTGATGAATACTCCCTCAGATACCCCATTAGGGAATTGGGAGAAGTATACAAATgGTATGGGGTCTAAATTGATGCAAAAAATGGGTTATATTATGGGAACAGGTCTTGGTAAGAAATCTGATGGTAGGATAGATCCAGTAACAGCAGTGGTTTTACCACCTGGGAAATCATTAGATCACTGTATGAACCTCAGGGAAAAACATGGCGGTGACAAAAATCTCTTCAGcatcgaaaaaaagatgaagaaacaACAAAGAAGAGAAGAGATACGAAGCAAGAAAGCATACCAAAAAGCACAAAATGAAACGGACGTTttcaaatttatgaatgaaactTTAAACACAAAACCATGCAGTTCATCCTCATTTGCTAAGTCTCAACATAGACGAGATATTCAAAAAGAAACTTGTCGAAATCTGAATGTAGAGAGTTGTAAAACAGAAGCAAATATAAAAAAGACCGAGAGAGATATAGATAGTATCAGACAATCTTTAACTAGACATAAAGATAGGAATTCTGTCATGCACAAAAATCTCCAACAGAAACTTAAATTGAACCTTGGTATTTTATCAGATCTGCAGGATAAAGCTCAGAATATAAAGAATGAACAAGACAATAGACGAGATAAGAAAAAAATGTCAGTGTTTTAG
Protein Sequence: MESEICPQCKDVVEATSKRIIKDSCGHEKCRVCLLQDVDCCRQCVENDMKRGVEENILLEKSDCPNENNHATVITCSKLLQTILIEEQDRKDSGEDDRKNKEDSGKIKLKPSQKRRYEMITMPSHINTEGSPPVFFCTICKAKFKTKGHVKYHKFCLGESKPHICGVCSKSFILKSQLNVHELIHTGKKPYNCKLCEKAFRESGKLKRHMALHSYDKPHVCDECGKNFKTLSSLRNHRIIHSGEKPFSCKYCKMKFNNSSNLKKHLLAHSEDKTHMCEQCGKKFKQKWALTVHCRSHMLKRDFVCKICNKTFVNNKDLKRHETVHLDVKIYSCGICSMSFRRKDNLGRHLRNAHTDKEPQIIKKEVEHRETVRSTVADNPNAINVITSFPMTTKNTDINNGTTRTCMNGPLKLAFKTSAFKKNYNINRDHPYESNNTNEVVKNIEQTSTKPVTKVAPPLIFPSVYATQGFNVDEYYANRPHIIKNIKFKIPTNYPPENEGLEQVNVALVSCSEENRQELLSLKHSLEELLALTCDNDSNLAESHYQNDTVDDKYAQFMAEINEVSQTGSKLPKNDSSDTSNLQELEGKKCRAPHVNKWGSKGYHNAMICSVFPSSSNNDDSQVRVLFVNPIHEEMLPCPYYFETDCKFSDEKCKFSHGEIVPASDIQDYVEPDFGTLEIGSPVLAKQSNKLWGRAKITSIFENTCMVKFETLKKDMELPFKEILPMEDDKANSLNVSDDDSSGEMRYDQDVVNMSLMNTPSDTPLGNWEKYTNGMGSKLMQKMGYIMGTGLGKKSDGRIDPVTAVVLPPGKSLDHCMNLREKHGGDKNLFSIEKKMKKQQRREEIRSKKAYQKAQNETDVFKFMNETLNTKPCSSSSFAKSQHRRDIQKETCRNLNVESCKTEANIKKTERDIDSIRQSLTRHKDRNSVMHKNLQQKLKLNLGILSDLQDKAQNIKNEQDNRRDKKKMSVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00999040;
90% Identity: iTF_00999040;
80% Identity: iTF_00999040;