Basic Information

Insect: Micraspis discolor
Gene Symbol: RREB1
Assembly: GCA_030674115.1
Location: JARTUT010002177.1:1945679-1950335[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00019 0.039 15.8 1.5 1 23 61 83 61 83 0.98

2 16 0.00037 0.075 14.9 0.5 1 23 96 118 96 118 0.98

3 16 0.00014 0.028 16.2 5.1 1 23 124 146 124 146 0.97

4 16 1.9 3.8e+02 3.2 0.1 1 23 205 229 205 229 0.79

5 16 0.031 6.3 8.8 1.2 2 23 235 257 235 257 0.94

6 16 0.77 1.5e+02 4.5 2.5 1 16 303 318 303 323 0.83

7 16 0.17 34 6.5 0.1 1 23 452 474 452 474 0.96

8 16 5.4e-06 0.0011 20.7 0.7 1 23 483 505 483 505 0.99

9 16 0.00069 0.14 14.1 3.1 1 23 511 534 511 534 0.97

10 16 0.00041 0.082 14.8 3.0 1 23 931 954 931 954 0.97

11 16 0.00041 0.082 14.8 0.4 2 23 1168 1189 1167 1189 0.97

12 16 0.1 21 7.2 6.3 1 23 1195 1218 1195 1218 0.97

13 16 0.038 7.6 8.6 2.5 1 23 1246 1270 1246 1270 0.95

14 16 0.25 50 6.0 1.3 1 23 1330 1353 1330 1353 0.94

15 16 0.014 2.8 10.0 0.4 3 23 1400 1420 1398 1420 0.93

16 16 0.0067 1.3 11.0 5.7 1 23 1426 1448 1426 1448 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00019	0.039	15.8	1.5	1	23	61	83	61	83	0.98
2	16	0.00037	0.075	14.9	0.5	1	23	96	118	96	118	0.98
3	16	0.00014	0.028	16.2	5.1	1	23	124	146	124	146	0.97
4	16	1.9	3.8e+02	3.2	0.1	1	23	205	229	205	229	0.79
5	16	0.031	6.3	8.8	1.2	2	23	235	257	235	257	0.94
6	16	0.77	1.5e+02	4.5	2.5	1	16	303	318	303	323	0.83
7	16	0.17	34	6.5	0.1	1	23	452	474	452	474	0.96
8	16	5.4e-06	0.0011	20.7	0.7	1	23	483	505	483	505	0.99
9	16	0.00069	0.14	14.1	3.1	1	23	511	534	511	534	0.97
10	16	0.00041	0.082	14.8	3.0	1	23	931	954	931	954	0.97
11	16	0.00041	0.082	14.8	0.4	2	23	1168	1189	1167	1189	0.97
12	16	0.1	21	7.2	6.3	1	23	1195	1218	1195	1218	0.97
13	16	0.038	7.6	8.6	2.5	1	23	1246	1270	1246	1270	0.95
14	16	0.25	50	6.0	1.3	1	23	1330	1353	1330	1353	0.94
15	16	0.014	2.8	10.0	0.4	3	23	1400	1420	1398	1420	0.93
16	16	0.0067	1.3	11.0	5.7	1	23	1426	1448	1426	1448	0.98

Sequence Information

Coding Sequence: ATGGAAGTATCCCCTAGTCCAATGAACTACTCAACCAAAGAAAAGAGAGACCAAAGCAACCACGATTCCGGCATCTTCTCCACGACCAACAACTCCATCTACGACGTGACGGAAAATCACAGCCGGATGACCCAATCTGAAAATTCACCATCTGAAAATGGAAGTGACTGCAGCGATAGATTTTCCTGTCCAATCTGCTCAACTGTACTGACAACCCAACATGACTTCACCCTACACATTAAATCTCACAATTGCGATAACGAGCCCCTGCTAGATGACAAAGGGTTCACCTGCAGGATCTGTTTCAAGGTGCTCAGTTCTAGCTCCAGTTTGGACAGGCATGTTTTAGTCCATAGCGGGGAGAGGCCTTTTCATTGCAAATATTGTGGCGATACTTTCACCACCAATGGAAACATGCATAGACACATGCGAGCTCATTCAATCAAAAGCAAAAACTACGAGTCAGATGGCAGTACAGATAGTAGTACCAGCAATACCGAATACAATAACAACAGGGTCAGATCTAAACTCAACAGGAAACGCAAGTTGGAAACTGACGAGGAAGATATCATTGAGAATAAGAGATTTTTCTCTCAAGATGATCGAAGAACATACAGATGTCCAGTTTGCGAAAGAAACGATTTTGAAACCATTTCTGTATTAGAAAACCACATGGAAGACAATCATCCTGATTATCCTGCCAAATGTCACCAATGTGGTAACGTCTTCTTGAACCAAAAACAGCTTGAAATACATCGAGTTTCTGTGCATGATAACGTGGACCATAAGCATCCCGTTGTCGGTTTCAAAGACCTAACATTTGTGGATTTCTCGAGTGAAAAGTTTCCTCATATTGCCAGATATGAATGTGAGAAAAACCTTCATAAGGTATCAGGAAGTCTGAAGTTCCAATGTAAAAAATGCAATCGTGCTTTTCCTTGTTCCAGCTCACTGGAGTTTCACGAAAAGGATTGCAAAGAAATCAATGCTGGTTTAGATTTATCAGCGCAGAAATTGACTGAAGTAGAAGTGAAAAGAAATGATTTCTTTTCTCGCTTAAACCTCCAAGACGTATCACCAGAAAAACATATCCCTAGTAGAAACGATATATCTACCAAAAACGAGCTTAAGAACTTACCAGATAACAACAAAGACTTAGCCGATATACAAACTATCATATCCATGACAACAAGCGGCAGTTTATTACAACAACTTCAACACAAAACTAACGAATTGACTAACAATCTCCAGAAGTCGCATTCCGAAATACAACCGGAAAATTCTAAGAACGAAGAAGAAGAGACACAGGATGCCTTCGCTGTGGAATTCCGAAAGATGAAGTTGAAAGGCGAATTTCCTTGTCGATTGTGCACGGCTATTTTTCCTAACTTGCGTGCTTTGAAAGGACATAACAGAGCACACCTCAATGGAAATAACAACGGTTCTTATCGTTGTAATATGTGTCCTCATTCTTCAGTGGACAAAGCTGCCCTCATTCGTCATATGCGAACGCACAATGGTGATCGCCCATACGAATGCTCGCTCTGTAATTATGCCTTCACCACCAAAGCAAACTGTGAAAGACATCTCAGAAATCGACATGCTAAAACCACAAGGGAGGAGGTTAAGAAGGCTATAATCTACCACCCTTCAGAAGATCCAACTAATGACGAAATAACCAAATTATCCAGTAGGGAAGACAACagaaaattaaataattcttcCAGCGAAATATTCGATACTCTTCCAGATAAAATTCACTGCTCCACACCCAAATTCGAAAGCAGACCGCTTCCACCCGAACTGAAACATATCCCCACATCGGAACGAAATCCTTTGATTCCCAACTTGCACTCATTGACAGACAGTCTCGGTTTAACAATGAGCAAAGAACCAATACAGCTATTCCCAAATATGAATGATGTGATTCGAAACGAGAACCTCAAGGCCGTCAAAGATTacagaaatattcaaaataatcccATGCCCCCATCTCCATATTTACCACCTTACGGCTTCCAACCTTCAACTGGAAAAATTCAGGTAAAAGATCTGAACGCGTTGAAGGTGAATCCATACGAAAACAACTCCGAGgaagaagaatatgaagaagacGATGAATACATTGATGTTGTATTAGATCTGAGTAAAAAGAAACCAACAATCGAAGAAGCAGAAAAAGAGGTTGAAGAATCTCCTCAAGAtttgtctttgaagtcttctcCATCACCTCCAGAAGTTGCTGCACCTGTGGCTGAAATTCTGCAGGCCAACCTTCTAAAAACACAACCTAAAATCGACCCGGCAGCATTTTACGCACACTGGGCTCTGTTGAGGAATGGTTTCGCTGGACTGCCAAGCTGGCCAAGTTTTCCTTTCAACCCATTATTTCTCCAACAACTCCAAAGTCAAATTCCAACAGGGGGAGATATGAAAGATAGATTGAGGAATCAGCTATGTGGTGGAACCTTGATAGCAGATAATCGCTTGCAAGCTTTACAGCAGATAAGAAATGCAGGCTTGATGCCAATTCCTATGAACAATATAGGTAATGAAACAAGACAAGAGGTGGAAAATAGCTATGTTGCTCCAACCTCGACTGAAGATCTCAGCCGGCCACTCAGTTTGAAAATCGAACAGAACATGAATGAAAATGTATCAAAAATGACTAGTCCTTTACCGCCATGTAAACAAGATATAATGCAGTCTCCAAATTCAGTTAAAATGGTGATCAAAAACGGTATATTGATGCCCAAGCAGAAACAGAGACGATACAGAACCGAAAGACCTTTTACATGTGAGCACTGTTCTGCCAGATTCACATTACGTTCGAATATGGAACGCCACATCAAGCAGCAGCACCCTCAGTTCTGGTCACAACGCCAGAGGGGTAACATCGGACACCCTGGCAGGAAATCCCAAGTTCTACCCATGAAACCAGGTTTTTGCGATTTGAGCATTCCAAACTAcgaaattcagaaaaatcaAGGTTACGAAGATAAAGAAATGCTGAGCGATAGACTTAAATTTGCGATCCTTGCTCAGCATCTGAGGGGAGTCAATAACTTTAATAATTCTGTAAAGAAAGAAGAAGATGAAGAAGACGCTTTAGTAATTGACGAGAACAGTGAAGATAAACCTTCTGAACTTCAAACAATGAACGATTCTTATGAAAAAGAATATCAGGAAGAGATTGGAAGGAGTGAATCTGAGAATGAGCAAAGAAGTATCGAACATAAGACTGTAAAATTGGAAGAGAGCCAAGACTTAGTACCAGTATCGAGACTGTTGGATAATGCTTCACAGCAGCAATTCAATGAATACTTTAAGAGAGATGTGGAAGAAAATGGAGCTGGAAGCGAAGAAGATGAAGAAGGTTTAGTGGCCAGTGGTAGCACCAGTGAAGGAAACATCTCTGGAACTGATGAAAATAAATCTGAATCAGAAAATACGGCTCCTGTCAAGAAGAAATCAGCGTATTCCCTAGCTCCAAACAGAGTCAGTTGTCCGTACTGCAGTCGCAAATTCCCTTGGACATCCTCTCTTCGCCGTCACATTTTAACGCATACAGGTCAGAAACCATTCAAATGTAGCCATTGCCCTCTTCTCTTCACCACGAAATCAAACTGTGACAGACATCTTTTGAGAAAGCACGGTAATGCTGCAACGACAATCACCAACGATGTAGCTAACAACAATGCCAACTATCTCATGAGGAATGTCCCTGAAAGACCTTTCAAGTGTTCCAGCTGCCCAAGCAGTACCTTCTCCACTTACACCAACTTAAAGAAGCACATCAGTTCAAAACACGCGACAAACGCCCAAGGTGATGATATCCGAGCTCAGGGCTACGAAGCTGGAAGTTCAGAAGATGAAAAGGTAGTCAACGTTTCCGATAATGTAAACGAGTGGAACCAAAACCAGAACCTTCATGCCAAAATGACTAACCAAGAGCCATTACCAAGTGTTGTTAATGCTGATCAACCATTCAAATGCCATCTTTGCGAATTCTCATTTGGTGAACGTCAAGAAGCACTAGACCATATCAAAGAAAAGCATGCTTCCGAGTATGACTTGTTGATGTCAAAGAATGCTTTGGATAGCAGTGCTACTACTCCTGAAGAAAGCACTCATAATGACGAAGAAGATAGTGAGATACGTGGAAAATTTCCTGATTACTCCAACAGGAAAGTTATATGCGCCTTCTGCATGCGTCGATTTTGGTCAGCTGAAGATTTGAGAAGACATATGAGGACCCACACTGGTGAAAGACCTTTTATGTGTGACATCTGTCGTAGGAGATTCACACTAAAGCATAGCATGTTAAGACATCGAAAGAAACATAatgtgaattttgacaacgatGCTGGTTTGAACAGCGATGAAGAGGGTGTTTCACCAAAATATGAAGCTGCCAACACCACCAAGAGAGTCGAAGATTCCGATGGAGCAAATGAAGCAGGAGATTTGATCAGTAACCTTCTTGGAATACGTCCATCCTTCATCGATAAAGTCTTAACTGCATCCGCAGATGATGCTGCTAAGCTTCTAGGCGTTCGAAATGGAGTGAAAGAATAG
Protein Sequence: MEVSPSPMNYSTKEKRDQSNHDSGIFSTTNNSIYDVTENHSRMTQSENSPSENGSDCSDRFSCPICSTVLTTQHDFTLHIKSHNCDNEPLLDDKGFTCRICFKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRAHSIKSKNYESDGSTDSSTSNTEYNNNRVRSKLNRKRKLETDEEDIIENKRFFSQDDRRTYRCPVCERNDFETISVLENHMEDNHPDYPAKCHQCGNVFLNQKQLEIHRVSVHDNVDHKHPVVGFKDLTFVDFSSEKFPHIARYECEKNLHKVSGSLKFQCKKCNRAFPCSSSLEFHEKDCKEINAGLDLSAQKLTEVEVKRNDFFSRLNLQDVSPEKHIPSRNDISTKNELKNLPDNNKDLADIQTIISMTTSGSLLQQLQHKTNELTNNLQKSHSEIQPENSKNEEEETQDAFAVEFRKMKLKGEFPCRLCTAIFPNLRALKGHNRAHLNGNNNGSYRCNMCPHSSVDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKAIIYHPSEDPTNDEITKLSSREDNRKLNNSSSEIFDTLPDKIHCSTPKFESRPLPPELKHIPTSERNPLIPNLHSLTDSLGLTMSKEPIQLFPNMNDVIRNENLKAVKDYRNIQNNPMPPSPYLPPYGFQPSTGKIQVKDLNALKVNPYENNSEEEEYEEDDEYIDVVLDLSKKKPTIEEAEKEVEESPQDLSLKSSPSPPEVAAPVAEILQANLLKTQPKIDPAAFYAHWALLRNGFAGLPSWPSFPFNPLFLQQLQSQIPTGGDMKDRLRNQLCGGTLIADNRLQALQQIRNAGLMPIPMNNIGNETRQEVENSYVAPTSTEDLSRPLSLKIEQNMNENVSKMTSPLPPCKQDIMQSPNSVKMVIKNGILMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGNIGHPGRKSQVLPMKPGFCDLSIPNYEIQKNQGYEDKEMLSDRLKFAILAQHLRGVNNFNNSVKKEEDEEDALVIDENSEDKPSELQTMNDSYEKEYQEEIGRSESENEQRSIEHKTVKLEESQDLVPVSRLLDNASQQQFNEYFKRDVEENGAGSEEDEEGLVASGSTSEGNISGTDENKSESENTAPVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNAATTITNDVANNNANYLMRNVPERPFKCSSCPSSTFSTYTNLKKHISSKHATNAQGDDIRAQGYEAGSSEDEKVVNVSDNVNEWNQNQNLHAKMTNQEPLPSVVNADQPFKCHLCEFSFGERQEALDHIKEKHASEYDLLMSKNALDSSATTPEESTHNDEEDSEIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFMCDICRRRFTLKHSMLRHRKKHNVNFDNDAGLNSDEEGVSPKYEAANTTKRVEDSDGANEAGDLISNLLGIRPSFIDKVLTASADDAAKLLGVRNGVKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00130772;
90% Identity: -
80% Identity: -