Mdis029514.1
Basic Information
- Insect
- Micraspis discolor
- Gene Symbol
- PAXBP1
- Assembly
- GCA_030674115.1
- Location
- JARTUT010001741.1:665752-669873[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.99 1.6e+04 -3.5 0.3 41 78 21 58 15 63 0.72 2 2 1.6e-28 2.5e-24 87.7 1.1 3 272 466 673 464 675 0.93
Sequence Information
- Coding Sequence
- ATGTCGCTTTTCCGAAAGCCAAAAAAACAAATCCAACGTAGAGTACTAACAGAAAATTCAGATGAAGATGAACCTATGGAAGTCGAGGTGCAAACTGTGCCAGTTGCTAAAAAAGCGAAAAAGATAAGAAAGACAAAAAACCCAAGCAAAGAAAAGCACAAAAGAAAGGAATCCAAACCAGAGAAAGAGAGCAAAAACAAGGATAAAACTGAGATAGTAACAGATGATCTGGTACTTGTTGTGAATCCTAGTCACAGGAAACCTCCAACACCTCCCCCTCCTATATTATCAGGAAGGGATGCTCTTTGCGCTGGTAAAAATGATCTATCGTCCGAAGAAGACGATGAGAATAATTCTCAAGGTGTTCACAGatTTTCCAAACCTGACAACTTCAAGAGAGTATTGGAATCTGGTGCCATACCTGATGCTGCAATGATTCATGCTGCTAGAAAAAGAAGGCAAAGAGCAAGAGAGTTGGGAGAAACAATTCCTCTTGAAGAGGAAAAAGAACCTGATAATACAGGTGGGCGCTTGCAAAGGGAGGATGAACAAGATGAAAGTGAGGATGAAAGGATTGACATGGATTTAAATCATAAAGTGAGAGATATTGAAAGACGCAGAGAACAGTTTTACGCTGCTCAGGAAAGTGACCAGGAAATTGATGAATGGGAGGATCAGCAGATACGAAAAGGAGTTACAGGAGCTGCTGCGGCTCTTGCCCAGGAACTATTAATGAATTCGGAACAATTGCAGCAGCAGGTTATTATTCCTGCGCCTGTAATTGAACCTGGGATACCAAGAACTCCCCAAATGATAATGGAAAAGCTCAAAGAACATTTCGAAGATGTTCGTACATCAAAACATCAACATTCTGTGCAACTGGACAAAGTTCAACAAGATATTGTAATGTTAACATCTGAAATGGATGAATTGAAGATAAAGGTACCCCAAGCAGCAGAACGTTTTAGATTCTATCAAGAACTTAGAGGATATATAACTGATTTAGTGGAATGTCTGGACGAAAAAATTGGAACAATCATGAGCTTAGAATTGAAAGCAATGGATCTGCAGGCTAAAAAATCAGAATGGTTTATTGAAAGAAGACGTCAGGATGTACGAGATCAAGCGGAAGAGGTGACCAGTAAAATTAATATGAGAAAGGTAACTGATgatgaactcaaaataagaagAGCAGCTGAAAGAGAAGGTCGACGAACAAGACGTAGAAGGGCAAGAGAATTAGCAGACCAGGCTACTAAACATGTCGAGGGTATGTCTAGCGATgacgaaatttcacaacaaGAAGAGATGAACTTTAATAAAGATCAGGAAACAATAGAAAACGAAGCCAAAGCAGTACTTGAGGATGTGACAGATGATTATTCAACAATTGCAAACATTCTCATCAAGTTTGAACATTGGAGAGAAAATGATATCAACTCTTATAATGAAGCATATGCCACTCTATGTCTACCCAAAGTAGTCAGTCCATTTGTTCGCCTTGAAACCTTATTTTGGAACCCCTTGTTGGAAAGTCAAGATTTAGAAAAGCTACCTTGGTATCGCACCTTAGCACTATATGGTTTGCACGATGACGAAACCGAATCATCTTTGGCGAAAGATCCAGATATCAACGTTCTTCCGATAATTGTGGAGAAGTTGATTGTTCCAAAATTGGTGCAGTTAGTTGACAGATGTTGGGATCCATTATCTGGTTCACAAACTCTCAGATTATTAAGCGTTGTTACAAGATACATAAGAAAATTCCCAACCTTAGGACCAGCCTGTAAACCTTTAAGTAACCTATTCCATGCTATcttgcataaaatgaaaacttCACTAGAACATGATGTGTTCATACCAATGAGTCCGAAGTTGGCTGATAGTAAATCGCATTTTTTTCAAAGGCAGTTCGCAAGTGGTATGAAGCTTCTGAAGAATATAACAAGTTGGCAAGGCGTTCTCAATGACAATACTCTCAAAGAACTGGCATTAACTTCCCTTATGAACCGTTATCTTTTAACAGCTATCAAATTTTGCATGTTAACAGATGCAGTTGCAAAGGTTAATCTTATAACTCATATTTTACCCAGAGTATGGCTGCAGGGTAATCTAACTGAGCTTACTATGTTTAAAACAACAGTACTGGGTTTATGTCAGCAACTTGATAAAAACAATCCCTTGCACCTGGAGTCTGTTGATATTGTAAATGGTATCCTGAAAACTTTGAGAAACAAATGA
- Protein Sequence
- MSLFRKPKKQIQRRVLTENSDEDEPMEVEVQTVPVAKKAKKIRKTKNPSKEKHKRKESKPEKESKNKDKTEIVTDDLVLVVNPSHRKPPTPPPPILSGRDALCAGKNDLSSEEDDENNSQGVHRFSKPDNFKRVLESGAIPDAAMIHAARKRRQRARELGETIPLEEEKEPDNTGGRLQREDEQDESEDERIDMDLNHKVRDIERRREQFYAAQESDQEIDEWEDQQIRKGVTGAAAALAQELLMNSEQLQQQVIIPAPVIEPGIPRTPQMIMEKLKEHFEDVRTSKHQHSVQLDKVQQDIVMLTSEMDELKIKVPQAAERFRFYQELRGYITDLVECLDEKIGTIMSLELKAMDLQAKKSEWFIERRRQDVRDQAEEVTSKINMRKVTDDELKIRRAAEREGRRTRRRRARELADQATKHVEGMSSDDEISQQEEMNFNKDQETIENEAKAVLEDVTDDYSTIANILIKFEHWRENDINSYNEAYATLCLPKVVSPFVRLETLFWNPLLESQDLEKLPWYRTLALYGLHDDETESSLAKDPDINVLPIIVEKLIVPKLVQLVDRCWDPLSGSQTLRLLSVVTRYIRKFPTLGPACKPLSNLFHAILHKMKTSLEHDVFIPMSPKLADSKSHFFQRQFASGMKLLKNITSWQGVLNDNTLKELALTSLMNRYLLTAIKFCMLTDAVAKVNLITHILPRVWLQGNLTELTMFKTTVLGLCQQLDKNNPLHLESVDIVNGILKTLRNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00020279;
- 90% Identity
- -
- 80% Identity
- -