Mdis037750.1
Basic Information
- Insect
- Micraspis discolor
- Gene Symbol
- -
- Assembly
- GCA_030674115.1
- Location
- JARTUT010002175.1:14321657-14322487[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-10 3.2e-08 34.5 0.0 1 41 18 59 18 61 0.90
Sequence Information
- Coding Sequence
- aTGGTTCGAGCTTACAAACGAAAACTTGGTGCTCGACGCTATGCCGATTATTCACCAGAACAATTAGAGGAATGTTTACAAGCAATAAGGAGTGGTTCATACAGCCATCGTCGAGCTGCAGAACACTTTAATATACCAAGACGAACTATTTTAAATAAACTTAAAGAGAAGCATACTAATAAAGTAGGGAAACCTACAATATTTTCCAGAGATGAGGAAGAATCTTTTGTTTCGTACATAGAAACATTGAGTGATTTTGGGTTTCCGATAACTACGGAAGATCTCAGAAATGTCATTAAAATTTACTTAGAGAGAACTAGCCGTGTAGTAAAAGATTTTCAAGGGAACAAGCCTGGTCTTGAGTGGCTAAAACATTTCTTGAAACGTCATGGAAGATTGAAAGAACGTATGGCATCCAACATTAAAAGAAGCCGAGCTGCAGTCACCGAAGATATCCTGCAGGATTATattaaaaacttgcaagaagttATCAAAGACGTCCCACCTGAAAATATTTGGAATCTAGACGAAACCAATTTAGCAGATGATCCTTCAAAGAAGAAAGTTATTTGTCGCCGTGGGacaaaatatcctgaaaaactttgtaatttttccaaatcaagCACTTCTGTAATGATTTGTGGCAGTGCGGCTGGTGAAATATTGCCGCCCTTTGTTGTTTACAAGGGTACCCAGATGTGGGACGTTTGGACTGGAGATGGCCCAAAGAACACTCGCTATTTTAGCACAAAGTCTGGGTGGTTTGATGGTCCAGCTTTTAATGAATGGTTTGAGAGCTTGTGCCTGCCCCGACTTAAGAAATCTGAATGA
- Protein Sequence
- MVRAYKRKLGARRYADYSPEQLEECLQAIRSGSYSHRRAAEHFNIPRRTILNKLKEKHTNKVGKPTIFSRDEEESFVSYIETLSDFGFPITTEDLRNVIKIYLERTSRVVKDFQGNKPGLEWLKHFLKRHGRLKERMASNIKRSRAAVTEDILQDYIKNLQEVIKDVPPENIWNLDETNLADDPSKKKVICRRGTKYPEKLCNFSKSSTSVMICGSAAGEILPPFVVYKGTQMWDVWTGDGPKNTRYFSTKSGWFDGPAFNEWFESLCLPRLKKSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00139342; iTF_00927505; iTF_00998517; iTF_00139350; iTF_01309307; iTF_01309309; iTF_00808247;
- 90% Identity
- iTF_00139342;
- 80% Identity
- -