Basic Information

Insect: Metopia argyrocephala
Gene Symbol: L
Assembly: GCA_963576795.1
Location: OY756208.1:177269845-177284639[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.4e-06 0.00091 20.7 1.7 1 23 241 263 241 263 0.98

2 17 0.59 72 5.2 5.7 1 23 269 291 269 291 0.98

3 17 3.2e-07 3.9e-05 24.9 3.1 1 23 297 319 297 319 0.99

4 17 1.5e-05 0.0018 19.7 0.3 1 23 325 347 325 347 0.98

5 17 0.01 1.3 10.8 0.2 2 23 460 482 459 482 0.96

6 17 0.039 4.8 8.9 0.7 1 23 583 605 583 605 0.97

7 17 0.43 52 5.7 2.0 2 23 613 634 612 634 0.95

8 17 0.0018 0.22 13.2 0.2 1 23 642 666 642 666 0.92

9 17 0.57 70 5.3 0.0 1 19 671 689 671 691 0.93

10 17 0.0019 0.24 13.0 2.9 1 23 763 785 763 786 0.96

11 17 4.2 5.1e+02 2.5 0.9 1 23 976 1000 976 1000 0.89

12 17 0.0011 0.14 13.8 4.8 2 23 1009 1031 1008 1031 0.97

13 17 0.16 20 7.0 0.1 1 23 1037 1059 1037 1059 0.92

14 17 0.063 7.7 8.3 0.2 2 23 1067 1088 1066 1088 0.96

15 17 0.83 1e+02 4.8 0.9 2 23 1178 1199 1178 1199 0.94

16 17 0.0024 0.29 12.8 0.1 1 23 1209 1231 1209 1231 0.97

17 17 0.009 1.1 10.9 0.9 1 23 1238 1260 1238 1260 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.4e-06	0.00091	20.7	1.7	1	23	241	263	241	263	0.98
2	17	0.59	72	5.2	5.7	1	23	269	291	269	291	0.98
3	17	3.2e-07	3.9e-05	24.9	3.1	1	23	297	319	297	319	0.99
4	17	1.5e-05	0.0018	19.7	0.3	1	23	325	347	325	347	0.98
5	17	0.01	1.3	10.8	0.2	2	23	460	482	459	482	0.96
6	17	0.039	4.8	8.9	0.7	1	23	583	605	583	605	0.97
7	17	0.43	52	5.7	2.0	2	23	613	634	612	634	0.95
8	17	0.0018	0.22	13.2	0.2	1	23	642	666	642	666	0.92
9	17	0.57	70	5.3	0.0	1	19	671	689	671	691	0.93
10	17	0.0019	0.24	13.0	2.9	1	23	763	785	763	786	0.96
11	17	4.2	5.1e+02	2.5	0.9	1	23	976	1000	976	1000	0.89
12	17	0.0011	0.14	13.8	4.8	2	23	1009	1031	1008	1031	0.97
13	17	0.16	20	7.0	0.1	1	23	1037	1059	1037	1059	0.92
14	17	0.063	7.7	8.3	0.2	2	23	1067	1088	1066	1088	0.96
15	17	0.83	1e+02	4.8	0.9	2	23	1178	1199	1178	1199	0.94
16	17	0.0024	0.29	12.8	0.1	1	23	1209	1231	1209	1231	0.97
17	17	0.009	1.1	10.9	0.9	1	23	1238	1260	1238	1260	0.96

Sequence Information

Coding Sequence: ATGTACTCGACTCATACATCATCCAGTTATTCACCTTCTATATCAGATGGTACAATTACACCAAATTCTTTATTACATCATCCCCATCAcaatcaacagcaacatcatcatcatcaacatacgcatcatcagcagcagcagcagcaacagcattTGGGTGTACCATCTCATTTACCATTTCCTGCAAATACTGCTGCTGCTTATGAGGAGGATACAACAACCTCATCATCCTTAGCTCTACAGACACAACGTCTGCCAAGACAAAAAACTAATGGAACACTTTTGGATGGCGCTGACTATGAAGACAATAATAATGGCAACGACAACGACAACGATAACGACAGTGACATTAACAACGACCAAAAAGACTTGAACAACGAAAGGATTCTgaaaaatgatacaaaattgTGTAAAGAAGGTGAAAAAGAAACGCATGTAACAGACAAAAAGACAGAAGCAAATACACGACGCGAAAGTGGTGAAGAACATcaccaacaacaacatattAAACGTCATGGTCGTCATCATCGTTATGCTGAACATGCCTTAAGAATTCCTTCCAAATTACGCAAAATCGATAGGGATTCAACGGTTGGTAATGGTGCCGCTACCATTGCTACTCATGCGGCTGCTGGTGGTGGTGGTGCAGTCAAGTTTGATAAGTTGACAAGAGATGACATTAAAAGTGTTGGTAATAATGCTGCAAGTGCCGACGGATCCTATCAGTGTCAATTCTGTGATAAATCATTTCCGCGTCttggttatttaaaaaaacatgaacAGaGTCATGCCGAACATTTGCCATTTAAATGTGAATACTGCGCTCGCCTCTTTAAGCATAAGCGCTCTAGGGATCGCCACACTAAACTGCATACGGGAGATAGGCGCTATCGCTGTCCTCATTGTGAGGCAGCTTTTTCGAGAAGcgatcatttaaaaattcatatgaaAACCCATGACAACCAGAAACCCTTTCAATGCACCATTTGCAATCGTGGCTACAATACAGCTGCTGCTCTTACTTCACATATGCAAAACCATAAAAAACAGGCAGCGCTATTGGCAGCGGGTGGTAATCCACAAGCTCTAAATTATAGTCCTCGTTCCACTGGTTCAGCCTCTAGTAGTGGTAGTTTACAAAAACGACGTTACGGCTTGGCCGGGGCTGCTGAACAAAGTCCCAATAGAATTGATTACCCTAAACGTGGACGTTCCTCATCATCGAATGCACTCAAATGCTCATTTTGTTCAAAATCCGACTTTACAGCTGTGGAACAATTGAACAATCATTTGCATACACAGCATGAAAAGGAATTGGCTCATTCAATGACACCACCAAATAGCCATCCGCCGTTAGAGCACCAGGGTTTTCAATTGTCTTGTGAATATTGTACCATGAAGTTCCCCAACATTGCTGTCATGTTCCAACATATGCGTACAGCTCATTTAGATCGTTTAACGAGTCCCAATTCGTACTTTGAGCATTTTAACCGATTAGCTGCTTCGGGGACTTTTAGCCCGCGCTTGTTAACTGGACCACCCCTACGAAGTTCAACCAGTACAGAGGAGAACTCTATTAAAGAAGAACACAATTTGTCAAGTCCTAAATCAGTAGATGCCAGTGTACGCCAAAATGAAGATGAGCCTACAGATTTGAGCCAAAATAATCGCAGATCTATTACCCCCTCTAATACACCACAAAACTCTCCACCAGAAAATTTAAGTAATACAGAAAAGCCGGGCTTGTTTTTCTGTAACCAATGCAATGCTGGCCTACCGGATTTTGAATCTTTTCGCAACCATTTAAAAACCCATATTACCCAGGGTCTGAATTTGGTTTGTCATCATTGTGGTCTTTTACTGAGAGAACACGCTGAATATGAGAGACATGTTATTTCTCACTTTTTAATTACTAATTCAGAATACAATTGTGCGGGAAATTGTCAGAAATCTTTTGGCAAGCCGGAAGAACTACAGAAACATCTTTTAGATCAACATGCCATAACAATGTTCAAATGTGGCCTCTGCAGTGAAATATTCGAATCAAAAGTGGCCATACAGGTACATTTTGCTTGTGCACACTCAGCGGAAACCAAAATTCTACGTTGCTCGGCCTGTATGGATGTCTTTCATGCGGAAACTGATTTTAATGCTCATGTAAAAGCCCGTCATCAAGCGGTTAATAATAATCCTGCTCCTGTTAACTCTTTGCAATGCATGTTTTGTCGTACCGTTTGTTCCTCCGACTTGGAAATGCAGTTTCATTTGGCAGCTCATGCCAGACAATTTCGTTGCCCTTCTTGTCCCGAAACTTTCCATGTAGAATTTTTACTTGATCGTCATATGCAAACCCATCATGGTGGCCTAGAGCGTTCACCACATCCGCCACCAATACCACCACCGCCAGCACAATCAGTAGCTCATAAGGAAGCCTTCGAGGAACACACCTCTCCAGTGCCCAATCCGAATGCTATTTCCCCCATGAATTCATTGTACGTGAATGCTCTGTTTGGTAAAACACCCCTTATGCCTCTGACAccacaaaataataacaacagcatTTTGGATTACAATATGGCCTTTGCTAGCCATCTTAATAAAGGTTTATTTCCTAATACTGGTcccaataaattttataatcctTTGCAAATCGATACCAATGCCATGAAGCATTCTGCCTTGATGTATGGCTTATCGCAAAGATATTTTGATACCAATCGCACAGTTATGGAAATGtatcaacaacagcagcagcagcagcaacaacaacaacaacagcagcagcagcaacaaacaCATATCCGAGATAATAACAAACTTACTGGCAACTATTTTATAAGTCCCAAACAGCCTTCGGCAGGAAGTCATGAATCTCATCACCTCTCTGATTTGCCATCTGCTGTATCATCGCTCAACAATACCGGTTTCAGTTGTGGCATTTGCGAACGAAACGATTTTCGCACAGAGTCTGAGGTGCACTCTCATCGTAAGATTGTTCATAATCTAAAGACAGGGGTTAGTCTAAAATGCGCCTATTGTTCGGGTAATTTTAAATCACGCAGCGAATTAGAACACCATATGAAAACATGTCATAATTCAACTGGTAAACACAAGTGTTTAATATGTGACGAAATCTTTCCATCGCCAGCCATATTAGCAGAGCATAAACTACAGCACTCCAAAGTGGGGCAATCGGGAAAATGTTCTCATTGCTCAAAGCCTTTAGCCGATGTGGCCGCATTTAAGGCTCATTTAAGCGAACACAATACAGAGGGGCAAATGCCAGTCCAATGTATATGTTGCCGTCAATCATTACACTCAGAATTCGAAATCGGTCTGCACGCAAAATATCACGTCAAAAATTCCCATGTTACTGAAAACGTTTGTGCTCTTTGCCTGGAACCTATAACAGCCTCACCTAATGAAGCTAAAGTCTGTGAGAAATGTTGCCGCAAACACAACCTCAATTCAAAGTTCAAGCAACGAGAACAATTTGAACGTTCCAACGACTTAATGCCATACATTGAAAATCGTTGCAACCTGTGCAAAATGATACTGCCTCATTCACAGAAGCTACAAGAACATTTAGTGGAACACACATTTGCCGGTTGCGAGGACCGCGGCTTTAATTGCTATATCTGCTCGGCAGTGTTTACTGCTTCTAGTGGTCTACTAAATCATATGCTAGAACATGGTTTAAATTCAAAACCCTATGACTGTAATCTATGCCctgagaaattttattttcgggCAGAATTGGATCATCATCTGATCAATCACGATTTAAGAAAATCTCCACAAGCTGTAAAAAATGAACACGAACAAATCACGGCAAAAGAAGATGAAAATTTCGAAAATCTTAAATCAGAGAAACCTTTAGCTCTAAACGACGTAAAACAGGAAGTTATTGAAAATGAGCACAATTCTAATAATGCCGATGAAGATGAATATATTGAAGTTGaaaatgttaatgaaaataacaataacaacaacaacaacaatagcagtAATATACAGGTTAAAACTGCTATCGAGTCTGACAAACGAACAGAGGAGACTAAAGACAAATCTACAGAGCAGTTAAGAAATGAAAGCTCATAA
Protein Sequence: MYSTHTSSSYSPSISDGTITPNSLLHHPHHNQQQHHHHQHTHHQQQQQQQHLGVPSHLPFPANTAAAYEEDTTTSSSLALQTQRLPRQKTNGTLLDGADYEDNNNGNDNDNDNDSDINNDQKDLNNERILKNDTKLCKEGEKETHVTDKKTEANTRRESGEEHHQQQHIKRHGRHHRYAEHALRIPSKLRKIDRDSTVGNGAATIATHAAAGGGGAVKFDKLTRDDIKSVGNNAASADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQALNYSPRSTGSASSSGSLQKRRYGLAGAAEQSPNRIDYPKRGRSSSSNALKCSFCSKSDFTAVEQLNNHLHTQHEKELAHSMTPPNSHPPLEHQGFQLSCEYCTMKFPNIAVMFQHMRTAHLDRLTSPNSYFEHFNRLAASGTFSPRLLTGPPLRSSTSTEENSIKEEHNLSSPKSVDASVRQNEDEPTDLSQNNRRSITPSNTPQNSPPENLSNTEKPGLFFCNQCNAGLPDFESFRNHLKTHITQGLNLVCHHCGLLLREHAEYERHVISHFLITNSEYNCAGNCQKSFGKPEELQKHLLDQHAITMFKCGLCSEIFESKVAIQVHFACAHSAETKILRCSACMDVFHAETDFNAHVKARHQAVNNNPAPVNSLQCMFCRTVCSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHGGLERSPHPPPIPPPPAQSVAHKEAFEEHTSPVPNPNAISPMNSLYVNALFGKTPLMPLTPQNNNNSILDYNMAFASHLNKGLFPNTGPNKFYNPLQIDTNAMKHSALMYGLSQRYFDTNRTVMEMYQQQQQQQQQQQQQQQQQQTHIRDNNKLTGNYFISPKQPSAGSHESHHLSDLPSAVSSLNNTGFSCGICERNDFRTESEVHSHRKIVHNLKTGVSLKCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCSKPLADVAAFKAHLSEHNTEGQMPVQCICCRQSLHSEFEIGLHAKYHVKNSHVTENVCALCLEPITASPNEAKVCEKCCRKHNLNSKFKQREQFERSNDLMPYIENRCNLCKMILPHSQKLQEHLVEHTFAGCEDRGFNCYICSAVFTASSGLLNHMLEHGLNSKPYDCNLCPEKFYFRAELDHHLINHDLRKSPQAVKNEHEQITAKEDENFENLKSEKPLALNDVKQEVIENEHNSNNADEDEYIEVENVNENNNNNNNNNSSNIQVKTAIESDKRTEETKDKSTEQLRNESS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01237143;
90% Identity: -
80% Identity: -