Basic Information

Gene Symbol
lilli
Assembly
GCA_030523045.1
Location
JAPYZF010000562.1:16397-28760[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.13 2.1e+03 -2.5 0.4 4 26 14 36 12 41 0.80
2 9 4.6e-05 0.79 8.8 0.1 29 82 60 116 50 120 0.76
3 9 1 1.7e+04 -19.3 43.3 450 490 114 154 107 175 0.61
4 9 1.6e-10 2.7e-06 26.8 2.1 344 444 289 383 268 397 0.65
5 9 0.0016 28 3.7 9.7 442 480 462 496 441 505 0.54
6 9 1 1.7e+04 -11.1 18.3 71 219 655 802 640 826 0.50
7 9 0.024 4.1e+02 -0.2 18.3 406 500 767 872 743 884 0.59
8 9 0.018 3.1e+02 0.3 14.2 56 220 1080 1239 1023 1280 0.44
9 9 0.031 5.2e+02 -0.5 0.6 127 219 1315 1408 1284 1443 0.59

Sequence Information

Coding Sequence
ATGAAGCAGAGAAGGATGGTTAATGCTATGGTTGACGTGGACCGAGACCGACTTCGGGAGCGTGAGCGACAGGCGCGCGCAGCCATGTCGGTCCAAGCAGAACAGGCAGCAGCAGTTGGAGGTCCCGAAGCTTGTCATACTCACCACAATCATAACAATCATGGCAATTCCCATGTATCAGCTGCCTCACTATTTCGCGCTCCCGTACGAgTCAATCCTGATGCGTATGACAGTACAACGCAGCAAATCCAATCGAAGCTGGGCAATTACTCACTGGTGAAGCATTTGTTGGATGAACCGAAAAGGTTAATTGGAATTGAAGGAGTTCCTGCTAGTCCAGCGCCATCAACTGGTTCATCTCTtagatcatcatcatcatcattatcatcatcatcatcatcatcatcatcatcatcatcctcatcttcatcatcatcatcatccggTTCAAATATGAGTACAGGCATATGCAGAAGTTCACCATCAACGCAAGAATTCAAAAAGCCTGGTTGTAGTGACTCAAAATCATGTTCGGCATCTTCAAGTCATGGATCCCAGCGTGGTGGGTTTGTCAAACCCGCGGATGGCAAACCTCCATACGGTGGTCGGGGTGGATATCCAGGCCAACCAGTTAAGCATGGTGGCAGTAGCAATGATCACAGAAGTCATGGACTTTTGCCAGCAAAAGGTCCGCCAACTACCACTATCACGAATGTCAACACCTCCAATGGGAATAACGGCGGTCAAACCTCTTCCGCAAACTGTCCTCCTATTAATGTAACTAATTCCAGTCGAGTTCATGTAGCTGCTTCCAGACCCTCCAGATTACCTCTAGACAATGGTATGAGACAACATGGATCTAGTGAAGGCACTGCAGActtggaaaatattctcaagGAAATGACAATGCCACCTACTCCACTCACTGCAATTGCGCAAACACCAAGGAAAGAACTCGAATCCAAGTTCACATTCAACCCCGTACTATCTAAAGTGACGGAGGTATCAATGGCGGTGTCATCCAAGCAATCACAACGTGATAGGCATGGTGTTAATAGATTATCTGCTGATTTGGAACGTGATTTGAGTCTTTCTGAAGATAGTGAGGATGAAGGGGTGAAAAGTTCAACTTCGAGATTATCGAAGAACGAGAATAGAAGCCCTGATTTGACCGTGGACCTCTCAACGCCTCTAATACCAGCGATGACACCCGCGCCCCCTCCTCTTGCACCAATGTCACCTATGGGTATGTCACCATTGGGTCCATTATCGTCACCTGGTCATTCAAGTCCGCCGAAACAATCATCACCAATCATAAGGCCATTATCAATTCCGTCCGCAAATTCACCTCGAAAATTTACTGCACCACTGGTGGCTCTGATGAGGCATTCAAGTCCACAGGGTCAAGCGCCACAAAGCTCAGCAAGCGCGAGTTCAAGTTCTGATTCCGGTTCGGATTCAGGTACAGACAGTAGCGATGATTCTGAAGACGATGGTGGTGATGTCGCTTGTGgcggtgatggtggtggtggtggtggtagtgaaAGTGTGAGAGGTGGTAATGGAACTGGTGTTATTGGTGGTAATGAGAGTGGCGATGTTAGTGGTGAGGGTGACGTTGGTGCACATTCATCTTCTAAGGGCCCTTCTACACCACCTTCAGCTTCACCTAATGTACTTGTCAATGAACCTCCACCTGCCGAAGAGTCTACCACTAGATGGAACCTCAGcagttttttcaataaaacgaCTGTACATCTGGGGGATCAAGTATCAGAACGCAAACATTGCCAGGATGGTGGTATTACACGTTGTGGGAGTTCTCCAGACGTGGCATCGCTTGAGAAGCGTAATCGGCGACTAGATATAACGCTTGTTAATAAAGATTGGCAACTGAATGAAACGCagaagaacaaaagaaacatgaaaatgttaaCAACATTGAGTGATAGTGAACAAAATTCCGATtatgagaagaagaaaaagtcaATAGAAGAATGCAAATTGCCTCGCCAGGACAAAACAAAGGCACCGGACGTTCGAAAGCGTGGTAGACCGCGAAAGACAGTGAAAGACTCGGGACAACACAGTCCGCGTAACTGTAGAATATCACCGGATGCACCAAAAACTATCTCTAAACGGGGTAATAGACCCCGCAGTGGTGGCAGTCCTAAGAAAAAATCGCTACCCATTTCCAGATTATTGGTGGTTGGCAATAGTGATGAGGAAGTGAGAAATGTGAGATTACGTGACAGATCGAGTGATTCCGATGAATTTGAGCAATCATCACGGATTTCTCAAGCCTCTACGATGAATGTCGAAAAGCGACAATCGCACTTGAGTATTTCTTCAAGTGATGATGAAACAACAACAAGTAATCTGCATAATGCTTCAGACGATGCACGGTGGCGAAAAATTGCGCCGAAACGTAATAAATTGACAGATTCACCAGTGAAAAAagtcgaaaagaaaaaaagtccaACAAAAGTAAAACCACGGCGTTCACAGTCACGAGTTAATAACGGATCAGGCTGTGCTTCGGATTCCGATAGTGAATCTGAACCAACGTCACGGAATAGTCGAATTCAAGTCGCAAGAGTGCCACCAAGACCGCGTCAACCTCTGACAAGAGCTACGTCTCTCGATAATTCAGATAGTGATAATAGCCCAACGCCAAAACTCCAAGAAGAAGACGCTGGCAACGTgcaggataaaaaaaagagtgacACTTTGAGGAAGTTATTTTCAAGCGCAAAAAGTGGTGCTAAAGGCGGTGGAAAAGGCGGTAAAGGTGGTAAAGGCGGAAAGGGTGGTAAAGGAGGCAAAGGCGGTGGTAAGTGTGGAATTTATGTTGAGGAATATACGGGTGGCGTTGCTAATACGCCTACAGGTAGTGAAAGCCCTTATAAAAGACCACCATCATCGCAAGCTTCAACAAAATCTAATTTGCCGTCGTTAATCTATATCAATGGTATGCCTAGCCTTATTTGTAGAATAGAACTCAGTAGAATTCAGCACATACCACAAATGTCAAGAGGTCAGCAATTGAGACAGAGGACAGAATTGCCGGATACGAGGCCAGTCCCGGGACAATCTGCAGCTAAAGTAAAGAGTGAAAGGCCATTAACACCAGAGGACGGCGAATTGCGCGATCAGCCGCCGAATCGCCAGTTATCGTCATCCATTGAATACAGAACACAGTTTGGTGACATCGAACATCATCAAGCTGCGTCAACCAACATTGACCAAATGAATCAGATTATGTGTTCGAAGACCAAACAATCAGATATTAGTAAGAGTGAACATATAGAAGCGACGTCCGCTGACAGTGTTCTAACTATTCGTGCTGTGGCTGGCGGCAGTGGAATAACAATGAGTAGTGGCAATATGAATTCAGGTGTGAATACTCTTTGTGGTAATAACATTGATAGTGTACCAAAACGTAAACGAAATCCGAGCAGTAGTTCATTGTCCAGTTTGAGTGTTTGTTCATTAGACTCCAAAGTTAAATCCAATAATGAacataaagagaagaaaaaacggAAGCGAAAACACATTGATAAGGAgacaacaaataattcaagatCCTCCATTCGATATAAAAGTGATGCGCAACCTACAAATCATGAACGGGAAGATAAATCTGATGTGAGTTTGTTGCCACCGCCTGCAGCGCCAATTCAACgcgttttttattcttattttaatCATCAGAATCAAATCTCAGACGATCAAGATAGGGACCAGAATCAACATTTGACCGAAGCCAAAAGATTGAAACGTAGTGCCGATGTAGAATGTGAATTGACAGCACAGGGTATGTTGTACTTGGAAGCAGCATTGTATTTTCTTCTAACTGGTCATGCAATGGAGTCAGATCCGGTAACTGAAAGAGCTTCATTCACAATGTACAAAGACACACTCAGTCTCATAAAGTacatttcttcaaaatttaaGAGCCAACAGAATAATTCTCCAGAGAGTAGCATACATAATAAGTTGGCAATCTTGAGCTTGTGGTGTCAGTCATTAATTTATCTGAAGCTATTCAAGATGCGAAAGCATGAAGCACATGAGTACCAAAAAATTCTCGCAGACTATCATCAAAAACCGGCACAACCAACGCTCGTCCAAACTGAGGGCCAAGGAACGCCATCGTTATCACCAACACCATCACCGGCTGGTTCGGTGGGTTCTGTTGGTAGTCAGAGTTCCGGATACAGTAGCGGTGAATTGGCGAATCGTGGTATGATTCCGGGGCAACCATCGGCAGCGACTTACGTCAGTGTTCCACTTGGTATTCATACAGCGATGCAGAAACagaatcatcatttttcattattgatgaattgtcaTGAACTATGGGACCAAGCAACGGCATTAGTAACTGATAAACATCGTGattttttcattgaactaGATGAGAAATTTGGACCGCTAACTTTAAAAAGTTCGTTACACGACTTGGTGCGTTATGTTGAAGCTGGTATCAAAAAATTGCGCGCCCTCTGA
Protein Sequence
MKQRRMVNAMVDVDRDRLRERERQARAAMSVQAEQAAAVGGPEACHTHHNHNNHGNSHVSAASLFRAPVRVNPDAYDSTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPASPAPSTGSSLRSSSSSLSSSSSSSSSSSSSSSSSSSSGSNMSTGICRSSPSTQEFKKPGCSDSKSCSASSSHGSQRGGFVKPADGKPPYGGRGGYPGQPVKHGGSSNDHRSHGLLPAKGPPTTTITNVNTSNGNNGGQTSSANCPPINVTNSSRVHVAASRPSRLPLDNGMRQHGSSEGTADLENILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLSKVTEVSMAVSSKQSQRDRHGVNRLSADLERDLSLSEDSEDEGVKSSTSRLSKNENRSPDLTVDLSTPLIPAMTPAPPPLAPMSPMGMSPLGPLSSPGHSSPPKQSSPIIRPLSIPSANSPRKFTAPLVALMRHSSPQGQAPQSSASASSSSDSGSDSGTDSSDDSEDDGGDVACGGDGGGGGGSESVRGGNGTGVIGGNESGDVSGEGDVGAHSSSKGPSTPPSASPNVLVNEPPPAEESTTRWNLSSFFNKTTVHLGDQVSERKHCQDGGITRCGSSPDVASLEKRNRRLDITLVNKDWQLNETQKNKRNMKMLTTLSDSEQNSDYEKKKKSIEECKLPRQDKTKAPDVRKRGRPRKTVKDSGQHSPRNCRISPDAPKTISKRGNRPRSGGSPKKKSLPISRLLVVGNSDEEVRNVRLRDRSSDSDEFEQSSRISQASTMNVEKRQSHLSISSSDDETTTSNLHNASDDARWRKIAPKRNKLTDSPVKKVEKKKSPTKVKPRRSQSRVNNGSGCASDSDSESEPTSRNSRIQVARVPPRPRQPLTRATSLDNSDSDNSPTPKLQEEDAGNVQDKKKSDTLRKLFSSAKSGAKGGGKGGKGGKGGKGGKGGKGGGKCGIYVEEYTGGVANTPTGSESPYKRPPSSQASTKSNLPSLIYINGMPSLICRIELSRIQHIPQMSRGQQLRQRTELPDTRPVPGQSAAKVKSERPLTPEDGELRDQPPNRQLSSSIEYRTQFGDIEHHQAASTNIDQMNQIMCSKTKQSDISKSEHIEATSADSVLTIRAVAGGSGITMSSGNMNSGVNTLCGNNIDSVPKRKRNPSSSSLSSLSVCSLDSKVKSNNEHKEKKKRKRKHIDKETTNNSRSSIRYKSDAQPTNHEREDKSDVSLLPPPAAPIQRVFYSYFNHQNQISDDQDRDQNQHLTEAKRLKRSADVECELTAQGMLYLEAALYFLLTGHAMESDPVTERASFTMYKDTLSLIKYISSKFKSQQNNSPESSIHNKLAILSLWCQSLIYLKLFKMRKHEAHEYQKILADYHQKPAQPTLVQTEGQGTPSLSPTPSPAGSVGSVGSQSSGYSSGELANRGMIPGQPSAATYVSVPLGIHTAMQKQNHHFSLLMNCHELWDQATALVTDKHRDFFIELDEKFGPLTLKSSLHDLVRYVEAGIKKLRAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00997028;
90% Identity
iTF_00997028;
80% Identity
-