Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060830.1:16819011-16838010[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.63 4.8e+02 2.8 0.0 26 51 129 154 121 156 0.83

2 14 0.48 3.6e+02 3.2 0.0 22 45 153 176 149 182 0.87

3 14 1.5 1.2e+03 1.5 0.0 22 49 209 236 205 240 0.79

4 14 6.9 5.3e+03 -0.6 0.0 22 44 237 259 234 267 0.80

5 14 4.8 3.6e+03 -0.0 0.1 23 48 266 291 262 296 0.81

6 14 0.019 14 7.6 0.1 21 46 348 373 345 381 0.85

7 14 0.032 25 6.9 0.0 22 51 433 462 429 464 0.85

8 14 0.32 2.4e+02 3.7 0.0 21 44 460 483 457 489 0.89

9 14 0.013 9.7 8.2 0.0 20 52 487 519 484 521 0.86

10 14 6.1 4.7e+03 -0.4 0.0 22 48 517 543 514 547 0.81

11 14 0.12 95 5.0 0.1 22 48 545 571 541 576 0.83

12 14 0.78 6e+02 2.5 0.0 22 51 573 602 570 605 0.83

13 14 0.19 1.4e+02 4.4 0.1 22 52 629 659 626 661 0.86

14 14 3.9 3e+03 0.2 0.1 22 52 657 687 654 688 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.63	4.8e+02	2.8	0.0	26	51	129	154	121	156	0.83
2	14	0.48	3.6e+02	3.2	0.0	22	45	153	176	149	182	0.87
3	14	1.5	1.2e+03	1.5	0.0	22	49	209	236	205	240	0.79
4	14	6.9	5.3e+03	-0.6	0.0	22	44	237	259	234	267	0.80
5	14	4.8	3.6e+03	-0.0	0.1	23	48	266	291	262	296	0.81
6	14	0.019	14	7.6	0.1	21	46	348	373	345	381	0.85
7	14	0.032	25	6.9	0.0	22	51	433	462	429	464	0.85
8	14	0.32	2.4e+02	3.7	0.0	21	44	460	483	457	489	0.89
9	14	0.013	9.7	8.2	0.0	20	52	487	519	484	521	0.86
10	14	6.1	4.7e+03	-0.4	0.0	22	48	517	543	514	547	0.81
11	14	0.12	95	5.0	0.1	22	48	545	571	541	576	0.83
12	14	0.78	6e+02	2.5	0.0	22	51	573	602	570	605	0.83
13	14	0.19	1.4e+02	4.4	0.1	22	52	629	659	626	661	0.86
14	14	3.9	3e+03	0.2	0.1	22	52	657	687	654	688	0.83

Sequence Information

Coding Sequence: atggatTATAAACTAGAGATTAAGAAAGAACCTGTGGACTATGATATGCAATTATTGGAACTGAAACCAGAAATTGAAGAAGAAAGCTTCTGTTGTACTGCTCATGACATTGAAGTAAAATCTCAAGAGGTGATAACTAATTGCACTGATTATGAGAAAATGAGTATCAAGCTAGAGATTAAGGAGGAACTGCTGGAACCCGGTAAAGATTCAATTGAGTTTAAATCTGAAACTGTAGAAGAAGATTCTTACATTCATGCTTATGACAGTATGTTGGAGAATGAAATAAAGGAGCAGAAAAAGCTTGACATTGCTTTAATGAAGGAGGAGATCACAATTGAGGAATCAAAATTTTTATACAGTGGTTCAGGGAAGAAGTGCCATGAGTGTGATGTTTGTGGAAAGATCTTTAACCAAGCATCGTCTATGAGAGAGCATCTTTttattcatgagggcaagaagccataTAAGTGTGATATTTGTGGGAAGGGCTTTACTTATGCATCTAATTTGAggggacatcttttgattcatgcgGAGAAGAAActgtttaattgtgaaacttgtGGAAAAGGctttacatacaaatgtaatttgagggaacatattttgattcacCAGGACAAGAAGTGTCatgaatgtaaagtttgtggaaagaCCTTTATCCAAGCATCATCTTTGAGGGATCATCTTTTTGTTCACGAGGGCaaaaaaccatataaatgtgaagtttgtggaaagggCTTTACCTATGCATCTAATTTGAGGGGACATAATTTGATTCATGTGGGTACcaaaccacataagtgtgaagtatGTGGAAGAAGCTTTACCAGAACATCTcatttgaagaaacatcttttgatacatgcaGAGAAGAAGCCTCATAAGTGTGAAGCTTGTGGGAAAGGCTTTACTATTCTATCTTCTTTGAAGGCACATCTGTttattcatgagggcaagaagccatatgaatgtgaagtttgtgggaaaggCTTTACTGTCGCATCTTCGTTGAAggtacatcttttgattcatgagagcacgaagccacataaatgtgaagtttgtgggaacaGTTATACCCAAGCACGTTTTTTAAGAGCACATCTTTTAACTCATGAGGAGAAGAAGCCATAtatgtgtgaaatttgtgggaaaggCTTTACTCGCAGTTCTTATTTGGGGGCACATCATTTGATTCATGAGGACAAGAAGCCTCATATATGTGAACTTTGTGGAAAGAGTTATATCAATACATCTTCTTTGAaggcacatcttttgattcatgagggtaagaagcctcATAGTTGTGAAgtatgtgggaagagctttactgaAGCATCTAAtttgaggaaacatcttttgattcatgaggatgAGAAACCACATAAGTGCGAAGtatgtggaaagagctttacccaagCATATCTTTTGAGAGAACATCTTTTGACTCATCAGGAGAAGAAGCCATAtatgtgtgaaatttgtgggaaaggCTTTACTTGCAGTTCTAATTTGAGAGCACATCTCTTggttcatgagggcaagaagccccaTATGTGTGAACTTTGTGGaaagaattttgcaaaaaaatcttctttgagggcacatcttttgattcatgagggcaagaagccataTAAGTGTGAAGCATGTGGTAGGAGCTTTACCCAAGCATCTAATTTGAggaaacattttttgattcatgagggcaagaaaccacataaatgtaaagtttgcgATAAGGGTTTTACCCAAACATCTTCTTTGAGAGaacattttttgattcatgagggcaagaagccacatatgTGTGAGCTGTGTGGAAAGAATTTTACCACTTTGTCTTCTGTGAGGGCACACCTTTTGGTTCATAAGGGCAATaggccacataagtgtgaagtatGTGCGAGGAGCTTTACCCAAGCATCAAAGTTGAAGAAGCATCTTtggattcatgagggcaagaagccacataaatgtaaaaGTTGCGAAAAGTGCTTTACCCAAGCATCTTCTTTGAAggtacatcttttgattcatgagggaaaGAAACCAtgtaagtgtgaaatttgtggaaaaagttTCATTCAGGCACATCATTGGAAAACTCATCATTTAGTTCATAGaGGAGTTGCTTGCATGAGTGTAAAGAGGAAGGACGTGCGAAGTGAACGCTCGCGAGTAGGGGAAGTGGAGTGTCTTGTTGAAGTACAAAAGTGTAAGGAGGATGGTTCACTAGAAAAGTCTAAAGCAGGGTGA
Protein Sequence: MDYKLEIKKEPVDYDMQLLELKPEIEEESFCCTAHDIEVKSQEVITNCTDYEKMSIKLEIKEELLEPGKDSIEFKSETVEEDSYIHAYDSMLENEIKEQKKLDIALMKEEITIEESKFLYSGSGKKCHECDVCGKIFNQASSMREHLFIHEGKKPYKCDICGKGFTYASNLRGHLLIHAEKKLFNCETCGKGFTYKCNLREHILIHQDKKCHECKVCGKTFIQASSLRDHLFVHEGKKPYKCEVCGKGFTYASNLRGHNLIHVGTKPHKCEVCGRSFTRTSHLKKHLLIHAEKKPHKCEACGKGFTILSSLKAHLFIHEGKKPYECEVCGKGFTVASSLKVHLLIHESTKPHKCEVCGNSYTQARFLRAHLLTHEEKKPYMCEICGKGFTRSSYLGAHHLIHEDKKPHICELCGKSYINTSSLKAHLLIHEGKKPHSCEVCGKSFTEASNLRKHLLIHEDEKPHKCEVCGKSFTQAYLLREHLLTHQEKKPYMCEICGKGFTCSSNLRAHLLVHEGKKPHMCELCGKNFAKKSSLRAHLLIHEGKKPYKCEACGRSFTQASNLRKHFLIHEGKKPHKCKVCDKGFTQTSSLREHFLIHEGKKPHMCELCGKNFTTLSSVRAHLLVHKGNRPHKCEVCARSFTQASKLKKHLWIHEGKKPHKCKSCEKCFTQASSLKVHLLIHEGKKPCKCEICGKSFIQAHHWKTHHLVHRGVACMSVKRKDVRSERSRVGEVECLVEVQKCKEDGSLEKSKAG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00995407;
90% Identity: iTF_00995407;
80% Identity: iTF_00995407;