Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060839.1:91033216-91064975[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 5.1 6.2e+02 3.0 1.6 1 11 192 202 192 207 0.90

2 10 2.7e-05 0.0033 19.6 4.6 1 23 250 272 250 272 0.98

3 10 1.2e-06 0.00014 23.8 2.4 1 23 278 300 278 300 0.98

4 10 0.00096 0.12 14.7 5.4 1 20 306 325 306 328 0.94

5 10 7.5e-06 0.00091 21.3 0.8 1 23 389 412 389 412 0.97

6 10 5.7e-06 0.00069 21.7 6.0 1 23 425 447 425 447 0.98

7 10 0.018 2.2 10.7 4.4 1 23 571 595 571 595 0.95

8 10 0.00025 0.03 16.5 2.4 3 23 628 648 626 648 0.91

9 10 3.2 3.9e+02 3.6 7.2 1 21 657 677 657 678 0.93

10 10 0.00033 0.04 16.1 1.7 1 23 753 775 753 775 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	5.1	6.2e+02	3.0	1.6	1	11	192	202	192	207	0.90
2	10	2.7e-05	0.0033	19.6	4.6	1	23	250	272	250	272	0.98
3	10	1.2e-06	0.00014	23.8	2.4	1	23	278	300	278	300	0.98
4	10	0.00096	0.12	14.7	5.4	1	20	306	325	306	328	0.94
5	10	7.5e-06	0.00091	21.3	0.8	1	23	389	412	389	412	0.97
6	10	5.7e-06	0.00069	21.7	6.0	1	23	425	447	425	447	0.98
7	10	0.018	2.2	10.7	4.4	1	23	571	595	571	595	0.95
8	10	0.00025	0.03	16.5	2.4	3	23	628	648	626	648	0.91
9	10	3.2	3.9e+02	3.6	7.2	1	21	657	677	657	678	0.93
10	10	0.00033	0.04	16.1	1.7	1	23	753	775	753	775	0.94

Sequence Information

Coding Sequence: ATGTGTGCACGTACAGAATCTGTCTTCAAAGGAAGTCAGCATGAGCAGCAGCAGcgacagcagcagcagcagcagcaaaccCCTCTTGGAGCTGAGTTCCCACTGGAACCAGAGGAGGTGGACCAGCCACGGACAACATCCATTGAGGTGTTTTCTTCCTCTCCAAACCCTACTGTCACTAAATTGATTGAGACGCAAGGGTCAGGTGATCTAGAAATTACACcagtaataaagaaagaaaataatgtgcaaCGGAAAGATGGACCCTGGAGCAGAGTGGGGCAGCCCACCCTAGAGGACTATGTGCTTATGCTGGAAGAAACGTTCACACTTGAAGCTGGCTGTGTAGAAAACAAGCAGGCACAACAAAGTCCCTTCAGGTTGGTGGCAAGTGGACAGATAGAGTTTCACACATCAAGTGGTAGTGCTGCTGCTGCAACTGGTAACCTAGATAAGGACATTCTTCTTACCCAGCGACGTAAACGAGAAGTCTTACCCCCAATGTGGGATGTGTATgaaagaggaaaggaaaatcGGGTGACTCATCGCCGTTACATTATCTCCAAGGGTGCTTTTCCTTGTTCACTCTGCAAGCGCTGCTTTGCCATCAGCCAAGGATTTGATAGGGAGTGGTCAGACTCTGGGGATCAGTATGAAGATGATGAGAATTCTACCCACCTGCTCTCAAATGACAGCAAGACAGATGCACCTCCTGCAGCTGGCACTCCTATGGAACCTCGCAAATTCTTTAGTTGCAGTGTTTGTTGTAAGGTATTTCCTCGGCGCAGTTCACTGAAGCGACACCAGCGAACGCACCTGGACAGAAAGCCATTTACATGTCCTCTCTGTCAGAAAGGTTTCAACCGAAAGGAACACCTTTCTCGCCACATGATCTCACATTCTGGTGGCCGGCCCTACAACTGTGACATCTGCTTCAAACCATTCACGCGCAAGGAGCATCTCTCCCGTCATCGTCTATGTCACCTGCCATCACGCATTTATACAAGACCAACCACCACAACACCTCCTGCTAATGGTGAAAGTAGCAATGGGAATGGTAATGATTGTGCCAGTGGTGAGGCAGAGCTCTCTGAAGTCAAGCGTCCAATTACTCCATTAGCATCTCTTGGAACTGTAAAGCAAGAGGAAGATGTTGCCAGACCTTTTGTTTGTGATCTCTGTGGACAGGGTTTTGCAAGAAAGGAACACCTATTGCGACATCAGATTCGCACACACCAGCGAACTGCCGATATAATAGATGAGCTGAAGCCATACAACTGTAATGTATGTCACAAGAACTTCACTCGCAAAGAACATTTGGTACGTCATCAAAAGATACATATGCGGGAGCTGTTTACACAGGGGGCGCCACATGGAAGTGCTGTGATACCAGGCACAGATGTGTCCTTGTCTCTGGCAGAACCACTTGAAGGAGTTATTCCTCCAGGTCTTAGCATCACAGCTCTTGATTGGGGAAATATTAAGACTGAACCTCCTGATACTGAGACCTCTCATACAGCAAGTAATGGCACTTCTCCCTCCACAAACATTGGTGAGAAATCTGCTAATATCAAGCCTCCAGCCACTTCAGTCTTAGCAGCTGCACTATCGACACCATTTTCTGGTACCCAGCCAGTTCTGCCTGCTGCACCAACATTTCCAGGTACATCAGCTCCACCTGCAGCCTCAACAGATGAGGTCCCTAGGAAACATCCATGTGAGTATTGCCCGGACAAATTGTTTTCTCGTCGCTCACATCTCTTACGACATTTCAAGCGTCTGCATGCAGATAAACCCATTAATCTGGTAGCAAGGCGTAGAGCATCTTCACAGGAAATGGGTCACTATGAACAATACCTACTTGAAAATGGTCAGTATTTGTGTATAGTATGTAATAAGACTTTTGGAAGGCGTTATCATTTAGTGCGCCATATGAAATTGCATGGGCCAAATGAAGTTGCTAAACCTTTTCATTGTTCTGCATGTAATAACTCATTCAGCCGTCATGAATACTTTCAATCACATCGTTGCAAGGCTGCTAACAAAGGAAGTGTGCCTACAGAAGCTGAAAAGGTGCAAGAATCAGAAGCTGCTGTAAATGAGACAACAGAGAACAAAATTGAAATCTCCCCAGAAAAACAAGATCAGGAAGTAAGTGATAAAGAAGTTTTTATGCAAGAGAACTTGGAAAAAGCTACAGAAACTACAAAGATTGTAGCAGCACGACGCGAGAAACgcaaaaaaagtaaatgtaattatgAGTGTGTGACTTGTGGAAAAGGATTTTCCAAGAAAAAATTCCTTAACAGACACTCAGAACAACATGAGGATCTTTCAGAAGACATGACTATCTATTATGATTAG
Protein Sequence: MCARTESVFKGSQHEQQQRQQQQQQQTPLGAEFPLEPEEVDQPRTTSIEVFSSSPNPTVTKLIETQGSGDLEITPVIKKENNVQRKDGPWSRVGQPTLEDYVLMLEETFTLEAGCVENKQAQQSPFRLVASGQIEFHTSSGSAAAATGNLDKDILLTQRRKREVLPPMWDVYERGKENRVTHRRYIISKGAFPCSLCKRCFAISQGFDREWSDSGDQYEDDENSTHLLSNDSKTDAPPAAGTPMEPRKFFSCSVCCKVFPRRSSLKRHQRTHLDRKPFTCPLCQKGFNRKEHLSRHMISHSGGRPYNCDICFKPFTRKEHLSRHRLCHLPSRIYTRPTTTTPPANGESSNGNGNDCASGEAELSEVKRPITPLASLGTVKQEEDVARPFVCDLCGQGFARKEHLLRHQIRTHQRTADIIDELKPYNCNVCHKNFTRKEHLVRHQKIHMRELFTQGAPHGSAVIPGTDVSLSLAEPLEGVIPPGLSITALDWGNIKTEPPDTETSHTASNGTSPSTNIGEKSANIKPPATSVLAAALSTPFSGTQPVLPAAPTFPGTSAPPAASTDEVPRKHPCEYCPDKLFSRRSHLLRHFKRLHADKPINLVARRRASSQEMGHYEQYLLENGQYLCIVCNKTFGRRYHLVRHMKLHGPNEVAKPFHCSACNNSFSRHEYFQSHRCKAANKGSVPTEAEKVQESEAAVNETTENKIEISPEKQDQEVSDKEVFMQENLEKATETTKIVAARREKRKKSKCNYECVTCGKGFSKKKFLNRHSEQHEDLSEDMTIYYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00821254;
90% Identity: -
80% Identity: -