Basic Information

Insect: Hymenopus coronatus
Gene Symbol: -
Assembly: GCA_030762935.1
Location: CM060884.1:2869976-2916301[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.2e-05 0.0095 19.0 4.6 1 23 250 272 250 272 0.98

2 9 6.1e-07 0.00026 23.9 2.4 1 23 278 300 278 300 0.98

3 9 0.0005 0.21 14.7 5.4 1 20 306 325 306 328 0.94

4 9 6e-06 0.0026 20.8 2.6 1 23 380 403 380 404 0.96

5 9 2.9e-06 0.0013 21.8 6.0 1 23 416 438 416 438 0.98

6 9 0.0093 4 10.7 4.4 1 23 546 570 546 570 0.95

7 9 0.00013 0.055 16.6 2.4 3 23 603 623 601 623 0.91

8 9 1.7 7.1e+02 3.7 7.2 1 21 632 652 632 653 0.93

9 9 0.00017 0.074 16.2 1.7 1 23 727 749 727 749 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.2e-05	0.0095	19.0	4.6	1	23	250	272	250	272	0.98
2	9	6.1e-07	0.00026	23.9	2.4	1	23	278	300	278	300	0.98
3	9	0.0005	0.21	14.7	5.4	1	20	306	325	306	328	0.94
4	9	6e-06	0.0026	20.8	2.6	1	23	380	403	380	404	0.96
5	9	2.9e-06	0.0013	21.8	6.0	1	23	416	438	416	438	0.98
6	9	0.0093	4	10.7	4.4	1	23	546	570	546	570	0.95
7	9	0.00013	0.055	16.6	2.4	3	23	603	623	601	623	0.91
8	9	1.7	7.1e+02	3.7	7.2	1	21	632	652	632	653	0.93
9	9	0.00017	0.074	16.2	1.7	1	23	727	749	727	749	0.94

Sequence Information

Coding Sequence: ATGACCGGCAGGCCAGCGGCTGAGGTTTCCATCAAGGTAATTTGTGGACCAAGGGACGTTGCCCCAAGTTTCAACAGCCATGGCAAGAGGATACATGATGTTGTgtaccacatgacaaccagccctgaggagggatcAGTGACTGCTCTCAGGTTTGTGGCAGGATCTTGTTGCTTGCAAGAGGTGGATCAACCACGGACAACATCCATTGAGGTGTTCCCTTCCTCTCCAAACCCTATGGTTACTAAATTAATTGAATCACAAGGTGATTTAGAGATTATGCCAGTGGTGAAGAAAGAGAAGATTGTTCAGAGGAAAGACAGACCCTGGAGTCGAGTAGGTCAGCCCACCCTAGAAGATTATGTTCTCATGCTAGAAGAAACATTTACGCTTGATGCTGGATCTGTAGAAAACAAGCAGGCGCAACAAAGCCCTTTCAGATTAGTGGCAAGTGGACAGATAGAGTTCCATTCATTGGGTGGTAGCAGTGGGAGTGGCACTGGTAACCTGGACAAGGATATTCTCCTTACCCAGCGACGCAAACGAGAAGTCCTCCCTCCAATGTGGGACGTGTATGAAAGGGGCAAGGAAAATTGGATAACTCATCGCCGTTATATAATCTCCAAAGGATTTGATAGGGAATGGTCAGATTCTGGGGACCAGTATGAGGAGGATGAGAATTCTACCCACCTGTTGACAAACTCTGCACCTCCTGCAGCTGGCACTACCTCGGAACCTCGCAAATTTTTTAATTGTAGTGTTTGTTGTAAGGTATTTCCTCGGCGTAGTTCACTAAAACGACATCAGCGGACTCATCTGGACAGAAAGCCATTTACTTGCCCCCTGTGTCAGAAAGGTTTCAACCGAAAAGAGCATCTTTCACGCCATATGATCTCACATTCAGGTGGGAGACCATACAACTGCGACATCTGCTTTAAACCATTCACACGCAAGGAGCACCTCTCCCGACACCGGCTGTGCCATCTACCATCGCGTATTTTTGTGAGACAAAATGTTGCACTTCCCCCTACAAATAGTGAAGGTAATGAAGATGAAGAGGCAGAGGTACCTGATGCTTCATCTGCTGTTACCCCAGCAGCATCTGTCAAACAGGAGCAGGATGATGTTGCCAGACCATTTGTATGTGATCTCTGTGGACAGGGTTTTGCAAGAAAGGAACATCTGTTGCGCCATCAGATGCGCACACACCATACGACTGCTGAGATAATAGATGAACTGAAACCATACAATTGTAATGTATGTCATAAAAACTTCACTCGCAAAGAACACCTTGTACGTCATCAGAAGATACACATGCGGGAacttttgatacaggggacgcCACATGGAAGTGCCGTTATTGCTGGTACTGATGTGTCTTTGTCACTAGCAGAACCACTTGAGGGAGTGATTCCTCCAGGGCTGAGCATTACTACACTGGACTGGGGCAACATTAAAACTGAACCTCCTGATGCGGAGGCATCTCGTACAGCCAATAATGCCACTTCTCCATCTGGTAATAGTGATGCTAGTACCAAACCTCCCAACATGTCAGTATTAGCAGCTGCACTCTCTACACCAGTTACTCCAGCATTCCCAGGTATGTCAGCTCCTCCTATTGAGGTCCCAAGGAAACATCCATGTGAGTATTGCCCAGACAAATTGTTTTCACGTCGTTCACACCTTTTAAGGCACTTTAAACGTTTGCATGCAGATAAACCGATTAATCTGATAGCAAGGCGTAGAGCATCGTCACAAGAAATGGGTCATTATGAGCAATATCTCCTAGAAAATGGACAATACTTGTGTATAGTATGCAACAAGACTTTTGGGCGACGTTATCATTTGGTGCGACATATGAAACTGCATGGGCCAAATGAAGTTGCAAAACCTTTCCATTGTTCTGCTTGTAATAACTCATTCAGCcggcatgaatattttcaatcgCATCGTTGTAAAGCTGCCAACAAAGAAACTGTTGCTGTAGCAGCTGATAAATTGCAGGAATCTGAGACTTCTTCAGAGATAACAGAAAATAAAGACGAAAAATCCCCAGAAACTCAGCTTGAAGAAGTTAGCGATAAAGAAACTCCATCACAGGAAAACCTTGGGCCAGATTCAGAATCGACAAAGATAGTAGCAGCAAGACGTGAGAAGCGCAAGAAAAGCAAATGTAGTTACGAGTGTGTGACGTGTGGGAAGGGATTTTCCAAGAAAAAGTTCCTCAACAGACACTCAGAACAACATGAAGATCTTTCAGAAGACATGACTATCTATTATGATTAG
Protein Sequence: MTGRPAAEVSIKVICGPRDVAPSFNSHGKRIHDVVYHMTTSPEEGSVTALRFVAGSCCLQEVDQPRTTSIEVFPSSPNPMVTKLIESQGDLEIMPVVKKEKIVQRKDRPWSRVGQPTLEDYVLMLEETFTLDAGSVENKQAQQSPFRLVASGQIEFHSLGGSSGSGTGNLDKDILLTQRRKREVLPPMWDVYERGKENWITHRRYIISKGFDREWSDSGDQYEEDENSTHLLTNSAPPAAGTTSEPRKFFNCSVCCKVFPRRSSLKRHQRTHLDRKPFTCPLCQKGFNRKEHLSRHMISHSGGRPYNCDICFKPFTRKEHLSRHRLCHLPSRIFVRQNVALPPTNSEGNEDEEAEVPDASSAVTPAASVKQEQDDVARPFVCDLCGQGFARKEHLLRHQMRTHHTTAEIIDELKPYNCNVCHKNFTRKEHLVRHQKIHMRELLIQGTPHGSAVIAGTDVSLSLAEPLEGVIPPGLSITTLDWGNIKTEPPDAEASRTANNATSPSGNSDASTKPPNMSVLAAALSTPVTPAFPGMSAPPIEVPRKHPCEYCPDKLFSRRSHLLRHFKRLHADKPINLIARRRASSQEMGHYEQYLLENGQYLCIVCNKTFGRRYHLVRHMKLHGPNEVAKPFHCSACNNSFSRHEYFQSHRCKAANKETVAVAADKLQESETSSEITENKDEKSPETQLEEVSDKETPSQENLGPDSESTKIVAARREKRKKSKCSYECVTCGKGFSKKKFLNRHSEQHEDLSEDMTIYYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00995725;
90% Identity: -
80% Identity: -