Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060834.1:16271706-16281214[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.012 1.4 11.3 0.1 2 23 159 180 158 180 0.95

2 17 0.0027 0.33 13.3 4.2 1 23 185 207 185 207 0.98

3 17 1.5e-05 0.0019 20.3 3.1 1 23 215 237 215 237 0.98

4 17 7.2e-06 0.00088 21.4 0.6 1 23 243 265 243 265 0.96

5 17 1.3e-05 0.0015 20.6 0.6 1 23 271 293 271 293 0.98

6 17 2.2e-05 0.0026 19.9 2.4 1 23 299 321 299 321 0.97

7 17 0.031 3.8 9.9 2.4 1 23 327 349 327 349 0.91

8 17 0.00016 0.019 17.2 2.3 1 23 355 377 355 377 0.97

9 17 5.1e-06 0.00062 21.8 3.2 1 23 383 405 383 405 0.98

10 17 0.00019 0.023 16.9 3.3 1 23 411 433 411 433 0.97

11 17 5.2e-05 0.0064 18.7 0.6 1 23 439 461 439 461 0.96

12 17 0.019 2.4 10.6 2.4 1 23 467 489 467 489 0.96

13 17 4.5e-07 5.5e-05 25.2 4.3 1 23 495 517 495 517 0.98

14 17 8.7e-06 0.0011 21.1 0.5 3 23 525 545 523 545 0.96

15 17 2e-06 0.00024 23.1 1.8 1 23 551 573 551 573 0.97

16 17 0.00067 0.082 15.2 1.5 1 23 579 601 579 601 0.98

17 17 1.1e-05 0.0014 20.8 6.0 1 23 607 629 607 629 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.012	1.4	11.3	0.1	2	23	159	180	158	180	0.95
2	17	0.0027	0.33	13.3	4.2	1	23	185	207	185	207	0.98
3	17	1.5e-05	0.0019	20.3	3.1	1	23	215	237	215	237	0.98
4	17	7.2e-06	0.00088	21.4	0.6	1	23	243	265	243	265	0.96
5	17	1.3e-05	0.0015	20.6	0.6	1	23	271	293	271	293	0.98
6	17	2.2e-05	0.0026	19.9	2.4	1	23	299	321	299	321	0.97
7	17	0.031	3.8	9.9	2.4	1	23	327	349	327	349	0.91
8	17	0.00016	0.019	17.2	2.3	1	23	355	377	355	377	0.97
9	17	5.1e-06	0.00062	21.8	3.2	1	23	383	405	383	405	0.98
10	17	0.00019	0.023	16.9	3.3	1	23	411	433	411	433	0.97
11	17	5.2e-05	0.0064	18.7	0.6	1	23	439	461	439	461	0.96
12	17	0.019	2.4	10.6	2.4	1	23	467	489	467	489	0.96
13	17	4.5e-07	5.5e-05	25.2	4.3	1	23	495	517	495	517	0.98
14	17	8.7e-06	0.0011	21.1	0.5	3	23	525	545	523	545	0.96
15	17	2e-06	0.00024	23.1	1.8	1	23	551	573	551	573	0.97
16	17	0.00067	0.082	15.2	1.5	1	23	579	601	579	601	0.98
17	17	1.1e-05	0.0014	20.8	6.0	1	23	607	629	607	629	0.99

Sequence Information

Coding Sequence: ATGGATTCGGAAGATGAAGTTAAGCCTGAGCCTTCTGAATCTGAAGCAACAGTGTTGCAACGTACTGAAGTGGTTGAAGATTCTTTATTTGAACCAATTGTGCTTCTGTCTACAGATAATGAAACAAAGGATGGGCAGTGGAAAGGCGAAGCTACAGAAGAAAAAGTGTTTGTGAGACAGTCAGATGTGAAGGAAGAATATGTTGAAGTAAATTCTAATGCAGCACAAAATGAGGCATGTTCTAAAACAAATAACTGTGCTAAAAAACAAGACAAAGTAAATGCAGCTCAAGAGAACTTAACTGCTGCAAAGCCCGTCAGCTATGTCAATCCTGGAAGTAGCAGCGACATTACAGCCAATGAGATGCAAATGCAATACCTAGCATCAGGCACTGAAGCCTGGGGAGTTACCAGCAGTATAAACAGCGTGGAACAAACCAGTATGCCCCCAGATAGCACTTCTGCAATCCCGCTCCCCTGTAGCATCTGTGGAAAGCTTTTTGACACAGAGCTGGGTCTTGAGGAGCACAAACAAAACCACATTAAGACACCGTACACTTGTGATGAATGTGGCAATACATTTACTGCTTTTCATCATCTTACCCAGCATAAGTCTGTCCACTGCAACAAGAACCCAATTCCATATGCGTGTGAAACATGTGGAAAATGCTTTGCCAAGCTCAGCACGCTTTTTAGACACAAACTTACTCATCTCAGTGATAAGACATTTTTCTGTGAAGTTTGTGGCAAAGAATTTTCAAACCAAGACAATCTTGACTCTCACAAACTTAGCCATACATTTGAGCATGACTATACCTGTAAGGAATGTGGTGAAGGCTTTACTGATTTACGGTATTTAATGGCACACAAGCAAAAGCACAAAGGAGAGAAGccccataaatgtgaagtatgtggaAAGGGCTTCACAACAATTAACCATTTAAAAGCCCATAAGCTAATTCACACTGGAGAAATGTCATATACATGTGACATTTGTGGAAAGTCATTTCTCTGGGCCTGCTCATTCAATCGACACAAACTGACACATACAGGTGAAAAACGGCATATATGTGATGTATGTGGTAAAGGTTTCATAGAGTCACAACATCTGAAGTCACATAAGCTAACACATACTGGTGAGAAACCTTATGCCTGCGATGAGTGTGGAAAGAGGTTCCGAAGACTCAATCACCTGCGTTATCACCGCCTAACTCACTCTGGGGAAAAGCCCCACTCATGTGATATTTGTGGCAAAAGTTTCATACAGTTACATCAAGTGAAGTTACATAAGCTCACACACACGGGAGAAAAGCGATATTCCTGTGACATTTGTGGCCGTGGCTTTATTCAGCTGCATGACTTGAGATCGCACAAATTAGCACATATGGGTGTTAAGCCACACACCTGTGATGAATGTGGAAAGGGTTTTCTTGAGATTCATCAACTTCGCTTGCACCGTCTAACACATACTGATCTCAAACTCCACGAATGTAACATATGTGGCAAATGCTTTCGTACTGTCAGCAACCTCAAGTCACATTTACTTACTCACAACAGTGATAAGCCCATCATCTGTGATGTCTGTGGCAAAGACTTTACAACATTACGTAACCTCAAGTCACACAAACTCACCCACTTGGAAGTGAAACCACATATTTGTGACATCTGTGGTAAAGGGTTTACTCAGTCACAGAATCTTAAATCCCACAAACTGACTCATACCTCAGAGAAGGAATATGCTTGTGATACTTGTGGCAAATTTTTTCTCACAATGAAATACCTAAAATCTCACCAGCGCATACATGGAACTTTAAAACCATTTCAATGTGAGGCTTGTGGTAAAAGTTTCACCCATAAACATTACTTGAAATCGCATGAACGAACCCATGTGCGTGAAAATGGTCTTCTTGTTATGCGATTTACAAGGAATGGGGATACCAGCATGTAA
Protein Sequence: MDSEDEVKPEPSESEATVLQRTEVVEDSLFEPIVLLSTDNETKDGQWKGEATEEKVFVRQSDVKEEYVEVNSNAAQNEACSKTNNCAKKQDKVNAAQENLTAAKPVSYVNPGSSSDITANEMQMQYLASGTEAWGVTSSINSVEQTSMPPDSTSAIPLPCSICGKLFDTELGLEEHKQNHIKTPYTCDECGNTFTAFHHLTQHKSVHCNKNPIPYACETCGKCFAKLSTLFRHKLTHLSDKTFFCEVCGKEFSNQDNLDSHKLSHTFEHDYTCKECGEGFTDLRYLMAHKQKHKGEKPHKCEVCGKGFTTINHLKAHKLIHTGEMSYTCDICGKSFLWACSFNRHKLTHTGEKRHICDVCGKGFIESQHLKSHKLTHTGEKPYACDECGKRFRRLNHLRYHRLTHSGEKPHSCDICGKSFIQLHQVKLHKLTHTGEKRYSCDICGRGFIQLHDLRSHKLAHMGVKPHTCDECGKGFLEIHQLRLHRLTHTDLKLHECNICGKCFRTVSNLKSHLLTHNSDKPIICDVCGKDFTTLRNLKSHKLTHLEVKPHICDICGKGFTQSQNLKSHKLTHTSEKEYACDTCGKFFLTMKYLKSHQRIHGTLKPFQCEACGKSFTHKHYLKSHERTHVRENGLLVMRFTRNGDTSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00821155; iTF_01410917; iTF_00434987; iTF_00955774;
90% Identity: iTF_01410917;
80% Identity: -