Basic Information

Insect: Hymenopus coronatus
Gene Symbol: -
Assembly: GCA_030762935.1
Location: CM060896.1:160517889-160525766[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.5e-05 0.015 18.4 0.1 1 23 159 181 159 181 0.97

2 17 0.0035 1.5 12.1 4.5 1 23 186 208 186 208 0.96

3 17 8.4e-06 0.0036 20.3 3.1 1 23 216 238 216 238 0.98

4 17 3.9e-06 0.0017 21.4 0.6 1 23 244 266 244 266 0.96

5 17 6.9e-06 0.003 20.6 0.6 1 23 272 294 272 294 0.98

6 17 1.2e-05 0.005 19.9 2.4 1 23 300 322 300 322 0.97

7 17 0.017 7.2 9.9 2.4 1 23 328 350 328 350 0.91

8 17 8.6e-05 0.037 17.2 2.3 1 23 356 378 356 378 0.97

9 17 2.8e-06 0.0012 21.8 3.2 1 23 384 406 384 406 0.98

10 17 0.0001 0.045 16.9 3.3 1 23 412 434 412 434 0.97

11 17 2.8e-05 0.012 18.7 0.6 1 23 440 462 440 462 0.96

12 17 0.01 4.3 10.6 2.3 1 23 468 490 468 490 0.96

13 17 2.4e-07 0.0001 25.2 4.3 1 23 496 518 496 518 0.98

14 17 4.7e-06 0.002 21.1 0.5 3 23 526 546 524 546 0.96

15 17 1.1e-06 0.00047 23.1 1.8 1 23 552 574 552 574 0.97

16 17 0.00037 0.16 15.2 1.5 1 23 580 602 580 602 0.98

17 17 6.1e-06 0.0026 20.8 6.0 1 23 608 630 608 630 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.5e-05	0.015	18.4	0.1	1	23	159	181	159	181	0.97
2	17	0.0035	1.5	12.1	4.5	1	23	186	208	186	208	0.96
3	17	8.4e-06	0.0036	20.3	3.1	1	23	216	238	216	238	0.98
4	17	3.9e-06	0.0017	21.4	0.6	1	23	244	266	244	266	0.96
5	17	6.9e-06	0.003	20.6	0.6	1	23	272	294	272	294	0.98
6	17	1.2e-05	0.005	19.9	2.4	1	23	300	322	300	322	0.97
7	17	0.017	7.2	9.9	2.4	1	23	328	350	328	350	0.91
8	17	8.6e-05	0.037	17.2	2.3	1	23	356	378	356	378	0.97
9	17	2.8e-06	0.0012	21.8	3.2	1	23	384	406	384	406	0.98
10	17	0.0001	0.045	16.9	3.3	1	23	412	434	412	434	0.97
11	17	2.8e-05	0.012	18.7	0.6	1	23	440	462	440	462	0.96
12	17	0.01	4.3	10.6	2.3	1	23	468	490	468	490	0.96
13	17	2.4e-07	0.0001	25.2	4.3	1	23	496	518	496	518	0.98
14	17	4.7e-06	0.002	21.1	0.5	3	23	526	546	524	546	0.96
15	17	1.1e-06	0.00047	23.1	1.8	1	23	552	574	552	574	0.97
16	17	0.00037	0.16	15.2	1.5	1	23	580	602	580	602	0.98
17	17	6.1e-06	0.0026	20.8	6.0	1	23	608	630	608	630	0.99

Sequence Information

Coding Sequence: ATGGACTCTGAAGATGATGTAAAACCAGAGCCCTCGGAATCCGAGACAGCAGCATTGCATCGCAGTGAAGTTGTAGAGGATTCTTTATTTGAACCAATAGTACTTTTGTCCACAGATAATGAAACAAAGGATGGACAATGGAAAGGTGAAGCTACAGAGGAAAGAGTATTTGTGAGACAATCAGATGTAAAGGAGGAGTATGTAGAAGTAAATGCTAATGCAGTTGCTGCATGCAACGAGGCACGTTCTTCTGGGAATGCAAATCACACAAAAAAACAGATCACAGTTAATGCAGTGCGAGACAACGTACCAGCTACAAAACATGCCAGTTACCCTGGAAGTAGCAGTAACATCTCAGCTAATGAGCTGCAGATGCAATATTTGACACCAGTTGGGGAAGGCTGGGGAGTTACCACTAGTGCAAGCAGTGAAGAACAGAACAACATGGCCCCAGATAACACACCTGCAATACCATTTGCCTGTAGCATCTGTGGCAAACTTTATGACACACAATCTGATCTCGAAGAGCACAAACAGATCCACATAAAGACTCCATACACCTGCGATGAATGTGGTAATACATTCACTGCTTTTCATCACCTGACGCAGCATAAATCTCTGCACTGTAACAAAAATCCAATTCCCTATGCGTGTGAAACATGTGGGAAATGTTTTGCCAAGCTCAGTACTCTGTTCAGACATAAATTGACACATCTCAGTGATAAGACATTCTTCTGCGAGGTTTGTGGCAAGGAATTCTCAAACCAAGACAATCTTGATTCTCATAAACTCAGCCATACCTTTGAGCATGATTACACGTGTAAAGAGTGTGGTGAAGGCTTCACTGATCTGAGGTATTTAATGGCTCATAAACAAAAGCACAAGGGTGAGAAGCCCCACAAATGTGAAGTATGTGGAAAAGGCTTCACAACAATAAATCATCTAAAAGCCCATAAACTCATTCACACTGGAGAGATGTCATatacatgtgacatttgtgggaAGTCATTTCTTTGGGCTTGTTCTTTTAATCGACACAAATTGACACACACAGGTGAGAAACGTCACATCTGTGATGTTTGTGGCAAAGGTTTCATTGAATCTCAACATCTTAAGTCACATAAACTAACTCACACTGGTGAAAAACCTTACGCCTGTGACGAATGTGGGAAGAGGTTCCGACGTCTGAATCATCTGCGCTACCATCGTCTAACTCATTCTGGAGAAAAGCCCCACTCGTGTGACATTTGCGGCAAAAGTTTCATACAACTGCACCAAGTGAAACTGCATAAGCTTACACATACCGGAGAAAAACGATACTCTTGTGACATTTGTGGCCGAGGTTTTATCCAACTCCATGACTTGAGATCACACAAATTGGCACATATGGGCGTCAAGCCGCATACCTGTGAGGAGTGCGGAAAGGGTTTCCTCGAGATTCACCAACTTCGGCTGCATCGTCTGACGCACACAGATTTGAAGCTCCATGAATGCAATATTTGTGGCAAATGTTTTCGTACTGTCAGTAATCTTAAGTCGCATTTATTGACACACAACAGTGATAAACCCATCATCTGTGATGTCTGTGGCAAAGACTTTACAACCTTACGTAATTTGAAGTCTCACAAACTCACTCACCTGGAAGTAAAACCACACATATGTGATATCTGTGGGAAAGGATTCACACAGTCACAGAATCTCAAATCTCACAAACTCACTCATACCTCCGAGAAGGAATATGCTTGTGATACGTGTGGCAAGTTCTTCCTCACGATGAAATATCTTAAGTCTCACCAACGCATACATGGAACTTTAAAACCATTTCAGTGTGAGGCTTGTGGGAAAAGTTTCACACATAAACATTATCTGAAGTCCCATGAACGGACACATGTGCGAGAGAATGGTCTTCTTGTAATGAGATTTGCTAGAAATGGAGATAACAGTGCATGA
Protein Sequence: MDSEDDVKPEPSESETAALHRSEVVEDSLFEPIVLLSTDNETKDGQWKGEATEERVFVRQSDVKEEYVEVNANAVAACNEARSSGNANHTKKQITVNAVRDNVPATKHASYPGSSSNISANELQMQYLTPVGEGWGVTTSASSEEQNNMAPDNTPAIPFACSICGKLYDTQSDLEEHKQIHIKTPYTCDECGNTFTAFHHLTQHKSLHCNKNPIPYACETCGKCFAKLSTLFRHKLTHLSDKTFFCEVCGKEFSNQDNLDSHKLSHTFEHDYTCKECGEGFTDLRYLMAHKQKHKGEKPHKCEVCGKGFTTINHLKAHKLIHTGEMSYTCDICGKSFLWACSFNRHKLTHTGEKRHICDVCGKGFIESQHLKSHKLTHTGEKPYACDECGKRFRRLNHLRYHRLTHSGEKPHSCDICGKSFIQLHQVKLHKLTHTGEKRYSCDICGRGFIQLHDLRSHKLAHMGVKPHTCEECGKGFLEIHQLRLHRLTHTDLKLHECNICGKCFRTVSNLKSHLLTHNSDKPIICDVCGKDFTTLRNLKSHKLTHLEVKPHICDICGKGFTQSQNLKSHKLTHTSEKEYACDTCGKFFLTMKYLKSHQRIHGTLKPFQCEACGKSFTHKHYLKSHERTHVRENGLLVMRFARNGDNSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00995481;
90% Identity: iTF_01410917;
80% Identity: -