Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060830.1:17340774-17357228[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8.1e-05 0.0099 18.1 0.4 3 23 160 180 158 180 0.96

2 17 0.03 3.6 10.0 0.1 5 20 188 203 186 205 0.91

3 17 9.3e-07 0.00011 24.2 1.0 1 23 212 234 212 234 0.98

4 17 3.9e-08 4.7e-06 28.5 1.5 1 23 240 262 240 262 0.98

5 17 7.9e-05 0.0096 18.1 6.9 1 23 268 290 268 290 0.97

6 17 1.8e-05 0.0022 20.1 1.1 1 23 296 318 296 318 0.98

7 17 7.5e-06 0.00091 21.3 2.2 1 23 324 346 324 346 0.97

8 17 4.6e-05 0.0056 18.8 0.8 1 23 352 374 352 374 0.98

9 17 3.5e-05 0.0043 19.2 2.3 1 23 380 402 380 402 0.98

10 17 2.8e-06 0.00035 22.6 2.1 1 23 408 430 408 430 0.97

11 17 6.5e-08 7.9e-06 27.8 1.7 1 23 436 458 436 458 0.99

12 17 2e-06 0.00024 23.1 3.7 1 23 464 486 464 486 0.97

13 17 1.9e-07 2.4e-05 26.3 2.9 1 23 520 542 520 542 0.97

14 17 1.4e-06 0.00017 23.6 4.6 1 23 548 570 548 570 0.98

15 17 2.8e-06 0.00035 22.6 6.1 1 23 576 598 576 598 0.98

16 17 7.4e-06 0.0009 21.3 0.9 1 23 604 626 604 626 0.97

17 17 0.047 5.7 9.4 0.1 3 15 632 646 631 648 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8.1e-05	0.0099	18.1	0.4	3	23	160	180	158	180	0.96
2	17	0.03	3.6	10.0	0.1	5	20	188	203	186	205	0.91
3	17	9.3e-07	0.00011	24.2	1.0	1	23	212	234	212	234	0.98
4	17	3.9e-08	4.7e-06	28.5	1.5	1	23	240	262	240	262	0.98
5	17	7.9e-05	0.0096	18.1	6.9	1	23	268	290	268	290	0.97
6	17	1.8e-05	0.0022	20.1	1.1	1	23	296	318	296	318	0.98
7	17	7.5e-06	0.00091	21.3	2.2	1	23	324	346	324	346	0.97
8	17	4.6e-05	0.0056	18.8	0.8	1	23	352	374	352	374	0.98
9	17	3.5e-05	0.0043	19.2	2.3	1	23	380	402	380	402	0.98
10	17	2.8e-06	0.00035	22.6	2.1	1	23	408	430	408	430	0.97
11	17	6.5e-08	7.9e-06	27.8	1.7	1	23	436	458	436	458	0.99
12	17	2e-06	0.00024	23.1	3.7	1	23	464	486	464	486	0.97
13	17	1.9e-07	2.4e-05	26.3	2.9	1	23	520	542	520	542	0.97
14	17	1.4e-06	0.00017	23.6	4.6	1	23	548	570	548	570	0.98
15	17	2.8e-06	0.00035	22.6	6.1	1	23	576	598	576	598	0.98
16	17	7.4e-06	0.0009	21.3	0.9	1	23	604	626	604	626	0.97
17	17	0.047	5.7	9.4	0.1	3	15	632	646	631	648	0.88

Sequence Information

Coding Sequence: atggatattaaacTAGAAGTTAAGAAAGAACCTCGGAATCCTGATACTTATTCATTTGATTTGAAACCAGAAATTAAGGAGGAAAATGGCTGTTGTGTCACTTTGTTGGAAAATGAGGTAAAgTGTCAGGAAGTTGTAAATGATTGTGATAACTTTGAGAAAATTAATATCAAACTAGAGATTAAAGAAGAGGCACTGGGCCCTGATACAGATGCATGTGAGTTGAAATCAGAAACTGTTGAAGCAAGTGTATGTAATCCTGTTGATGATGCTGGGCTGGAGACTGAGGTAAAGGGGCAGAAACATGTTGATATAGCTTTAATGAAGGAAGAGATCACAATTGAAGAGTTAACTTTATCATACAATGATCAAGGATCACATACAGAAGACCTATCCAGTTATTTGGACAATCCATCCACTTCATTTGTTGATGTTATGCTGAACAGAAAAGACAACACAGAGAAGCAGATATTAGCATGCAAATTTTGTGATAGTACTTTCCCTACCTCTTCATCTTTAAAAGAACATATACTAATGCACGGATCTAAAAGAAAACATAAGCTCTGTGAAAAAAGTTTTACTCGGGTATCAAAATTGgcaaatcatatttatattaatgaagataataaaccacacaagtgtgaagtttgtggaaagaactttacTCAGGCAGGTAATAtgaggagacatcttttgattcatgagggtaagaaaccctataagtgtgaagtttgtgggaagagctttactcataCATCTAATTTAAAGgctcatcttttaattcatgagggcaagaaaccgcacaagtgtgaaatttgtggtaaAAGCTTTACACAGGCATGTCATATGAGGaaacatctttttattcatgaGGAAAAGAAACAACATAAGTGCGACATTTGTGGGAACAGCTTTACCAAGGCATCTAAATTGATgtctcatcttttgattcatgagggcaagaagccccataggtgtgaaatttgtggaaagagctttgcTCAAGCATGTAATGTGAGAAAACATCTTTTGGTTCACGAGGGCAAGAAACCCCATAAGTGTGAGGTTTGTGAAAAAAGTTTTACCCTGATATCTACTTTGAAGGCTcaccttttgattcatgaaggcaagaagCCTCATAAGTGTgaattttgtgggaagagctttactctgACATCTACTTTGAGggatcatcttttgattcatgagggtaagaagccgcATAAGTGTGacatttgtggaaagagctttacccagataTCTCATTTGAAGGGACatgttttgattcatgagggcaaaaagccttataagtgtgaagtttgtggtaagagctttactcaaacaagtaatatgagaAAACATCTTTTGACTCATGAGAGGAAGAAGCCACATGAGTGTCAAGtttgtgggaaaagatttacCCAGACGTCTcatttaaaaacacatattttgattcatgggGTCAAGAAATCACTGGAATGTGAAGTTTATGGCAATAGTTTTAACCAGCCAACTAATCTGAGGGAACagcttttgattcatgagggcaggAAGCTCTATATGTGTGAAcattgtgggaaaagctttaccgATTCATCTACTCTAAGGAAACATCTTTtcattcatgagggcaagaaaccatataaatgtgaaatttgtgggaagtgTTTTACCCAGACATCTCATTTGAAGGGACATCTTTTGagtcatgagggcaagaagccccaTAAGTGTGATGTTTGTGGGAAATGTTTTACCAGGACATCTCATTTAAGagtacatcttttgattcatgagggcaagaagccctATAAGTGTGAAATATGTGAGACACGATTTACCCAAATGTCTTCTTTGAGGAAACATCTTTTAGCACATGAGAACAAGGCACCTTGTAAATgggaaatttgtgggaagagctttatccaaTCATCTAATATTAAAGGCAAAAACACATGA
Protein Sequence: MDIKLEVKKEPRNPDTYSFDLKPEIKEENGCCVTLLENEVKCQEVVNDCDNFEKINIKLEIKEEALGPDTDACELKSETVEASVCNPVDDAGLETEVKGQKHVDIALMKEEITIEELTLSYNDQGSHTEDLSSYLDNPSTSFVDVMLNRKDNTEKQILACKFCDSTFPTSSSLKEHILMHGSKRKHKLCEKSFTRVSKLANHIYINEDNKPHKCEVCGKNFTQAGNMRRHLLIHEGKKPYKCEVCGKSFTHTSNLKAHLLIHEGKKPHKCEICGKSFTQACHMRKHLFIHEEKKQHKCDICGNSFTKASKLMSHLLIHEGKKPHRCEICGKSFAQACNVRKHLLVHEGKKPHKCEVCEKSFTLISTLKAHLLIHEGKKPHKCEFCGKSFTLTSTLRDHLLIHEGKKPHKCDICGKSFTQISHLKGHVLIHEGKKPYKCEVCGKSFTQTSNMRKHLLTHERKKPHECQVCGKRFTQTSHLKTHILIHGVKKSLECEVYGNSFNQPTNLREQLLIHEGRKLYMCEHCGKSFTDSSTLRKHLFIHEGKKPYKCEICGKCFTQTSHLKGHLLSHEGKKPHKCDVCGKCFTRTSHLRVHLLIHEGKKPYKCEICETRFTQMSSLRKHLLAHENKAPCKWEICGKSFIQSSNIKGKNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00995988;
90% Identity: iTF_00995988;
80% Identity: iTF_00995988;