Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060835.1:52156134-52157840[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00011 0.013 17.7 1.4 1 23 8 30 8 30 0.97

2 20 7.9e-06 0.00096 21.3 5.4 1 23 36 58 36 58 0.98

3 20 6.9e-06 0.00084 21.4 1.3 1 23 64 86 64 86 0.97

4 20 3.6e-06 0.00043 22.3 3.4 1 23 92 114 92 114 0.97

5 20 1.8e-06 0.00022 23.3 0.8 1 23 120 142 120 142 0.98

6 20 1e-06 0.00012 24.1 0.9 1 23 148 170 148 170 0.98

7 20 5.6e-07 6.8e-05 24.9 0.5 1 23 176 198 176 198 0.98

8 20 3.1e-07 3.8e-05 25.7 1.7 1 23 204 226 204 226 0.98

9 20 2e-05 0.0024 20.0 0.8 1 23 232 254 232 254 0.98

10 20 1.6e-06 0.00019 23.4 2.0 1 23 260 282 260 282 0.97

11 20 1.7e-05 0.0021 20.2 1.1 1 23 288 310 288 310 0.98

12 20 2.8e-07 3.4e-05 25.8 0.6 1 23 316 338 316 338 0.97

13 20 3.3e-08 4e-06 28.7 3.7 1 23 344 366 344 366 0.98

14 20 3.3e-06 0.0004 22.5 0.9 1 23 372 394 372 394 0.98

15 20 1.6e-06 0.00019 23.5 0.4 1 23 400 422 400 422 0.96

16 20 0.00029 0.036 16.3 0.6 1 23 428 450 428 450 0.97

17 20 1.2e-05 0.0015 20.7 1.0 1 23 456 478 456 478 0.97

18 20 0.00037 0.045 16.0 0.4 1 23 484 506 484 506 0.98

19 20 7.6e-07 9.3e-05 24.4 1.4 1 23 512 534 512 534 0.98

20 20 1e-06 0.00012 24.0 0.6 1 23 540 562 540 562 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00011	0.013	17.7	1.4	1	23	8	30	8	30	0.97
2	20	7.9e-06	0.00096	21.3	5.4	1	23	36	58	36	58	0.98
3	20	6.9e-06	0.00084	21.4	1.3	1	23	64	86	64	86	0.97
4	20	3.6e-06	0.00043	22.3	3.4	1	23	92	114	92	114	0.97
5	20	1.8e-06	0.00022	23.3	0.8	1	23	120	142	120	142	0.98
6	20	1e-06	0.00012	24.1	0.9	1	23	148	170	148	170	0.98
7	20	5.6e-07	6.8e-05	24.9	0.5	1	23	176	198	176	198	0.98
8	20	3.1e-07	3.8e-05	25.7	1.7	1	23	204	226	204	226	0.98
9	20	2e-05	0.0024	20.0	0.8	1	23	232	254	232	254	0.98
10	20	1.6e-06	0.00019	23.4	2.0	1	23	260	282	260	282	0.97
11	20	1.7e-05	0.0021	20.2	1.1	1	23	288	310	288	310	0.98
12	20	2.8e-07	3.4e-05	25.8	0.6	1	23	316	338	316	338	0.97
13	20	3.3e-08	4e-06	28.7	3.7	1	23	344	366	344	366	0.98
14	20	3.3e-06	0.0004	22.5	0.9	1	23	372	394	372	394	0.98
15	20	1.6e-06	0.00019	23.5	0.4	1	23	400	422	400	422	0.96
16	20	0.00029	0.036	16.3	0.6	1	23	428	450	428	450	0.97
17	20	1.2e-05	0.0015	20.7	1.0	1	23	456	478	456	478	0.97
18	20	0.00037	0.045	16.0	0.4	1	23	484	506	484	506	0.98
19	20	7.6e-07	9.3e-05	24.4	1.4	1	23	512	534	512	534	0.98
20	20	1e-06	0.00012	24.0	0.6	1	23	540	562	540	562	0.97

Sequence Information

Coding Sequence: ATGCATgggggcaagaagccacataaatgtgaagtttgtgggaagagttttacttGGACATCTAATATAAAGAGACATCTcttgatacatgagggtaagaagccacataaatgtgaaatttgtggtaagagctttacccaggcatgtcatttaaggggacatcttttgacgcatgagggtaagaaaccacatgaATGTGAAGTTTGTAGTAAGAGCTTTACACAGACATCTGATTTAAGGAtgcatcttttgatacatgagggtaaaaaattacataaatgtgaaatttgtagaAAAAGCTTTATCACACCATCTCATTTAAGTAGACATCTTTTGTTGCATGAgagtaagaaaccatataaatgtgaagtttgtggaaagagctttaccaaGACATCTACTTTAAAGGGACATCTTTCggtgcatgagggtaagaaaccatataaatgtgaaatttgtgggaagagctttaccaagACATCTACTTTAAAGGGACATCTTTCcgtgcatgagggtaagaaaccatataaatgtgaaatttgtggaaagagctttaacCAAACATCTACTTTAAAGGGACATCTTTTGGTgcacgagggtaagaaaccacataaatgtgaagtttgtgggaagagctttaccacAACATCTggtttaaggaaacatcttttgatacatgagggtaagaaaccacataaatgtgaagtttgtgggaagcgCTTTACTGTGACATATGGTTTAAGGATACATCTGTTGATacacgagggtaagaaaccacataaatgtgaaatgtgtaGAAAGAGCTTTATCACGCCATCTGATTTAAAGAGACACCTTTtgctgcatgagggtaagaaaccacataaatgtgaagtttgtgaaaagagTTTTGCCACGACATCTACTTTAAAGGGACATCTTATGGTGCACTGGGGTattaaaccatataaatgtgaaatttgtgggaagagctttaaccAGACATCTAGTTTAAGGAGTCATCTTGTggtgcatgagggtaagaaaccatataaatgtgaaatttgtgggaagagctttaaaCGAACATCTCATTTAAAGAGGCATCTTATGTTGCATGAGGGTgtgaaaccacataaatgtgaagtttgtgggaagagctttgccACGACATCTACATTAAAGGGACATCTTTTGGTGCACGAGGTtaggaaaccacataaatgtgaaatttgtgggaagagctttgccCAGGCATCTACTCTAAAGGGACATCTTTTGGGccacgagggtaagaaaccacataaatgtggaGTTTGTGGGAAGGGCTTTACCTGGACATCTggtttaaggaaacatcttttgatacatgagggtaagagaccacataaatgtgaaatttgtagaAAGAGCTTTATCATACCATCtgatttaaggagacatcttttgctGCATGAGGATAAGAAGCCATacaaatgtaaagtttgtgggatGCTCTTTACGGAGACTTCTACTTTAAAGGGACATCTTTTggtgcatgagggtaagaaaccacataaatgtgaaatttgtgggaagagctttacccagacatctTCTTTAAAGGGACATCTTTTggtgcatgagggtaagaaacctcATGAATGTGaggtttgtgggaagagcttttcCTGGCCATctaatttaaggagacatcttttgatgcatgagggtaagaatccatattaa
Protein Sequence: MHGGKKPHKCEVCGKSFTWTSNIKRHLLIHEGKKPHKCEICGKSFTQACHLRGHLLTHEGKKPHECEVCSKSFTQTSDLRMHLLIHEGKKLHKCEICRKSFITPSHLSRHLLLHESKKPYKCEVCGKSFTKTSTLKGHLSVHEGKKPYKCEICGKSFTKTSTLKGHLSVHEGKKPYKCEICGKSFNQTSTLKGHLLVHEGKKPHKCEVCGKSFTTTSGLRKHLLIHEGKKPHKCEVCGKRFTVTYGLRIHLLIHEGKKPHKCEMCRKSFITPSDLKRHLLLHEGKKPHKCEVCEKSFATTSTLKGHLMVHWGIKPYKCEICGKSFNQTSSLRSHLVVHEGKKPYKCEICGKSFKRTSHLKRHLMLHEGVKPHKCEVCGKSFATTSTLKGHLLVHEVRKPHKCEICGKSFAQASTLKGHLLGHEGKKPHKCGVCGKGFTWTSGLRKHLLIHEGKRPHKCEICRKSFIIPSDLRRHLLLHEDKKPYKCKVCGMLFTETSTLKGHLLVHEGKKPHKCEICGKSFTQTSSLKGHLLVHEGKKPHECEVCGKSFSWPSNLRRHLLMHEGKNPY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00995362;
90% Identity: iTF_00995362;
80% Identity: iTF_00995362;