Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060833.1:67819901-67836858[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00088 0.11 14.8 0.4 2 23 104 125 103 125 0.96

2 25 2.1e-05 0.0025 19.9 1.2 1 23 155 177 155 177 0.96

3 25 1.6e-06 0.00019 23.4 0.9 1 23 183 205 183 205 0.98

4 25 2.3e-06 0.00028 22.9 0.4 1 23 211 233 211 233 0.98

5 25 2e-05 0.0024 20.0 0.6 1 23 239 261 239 261 0.98

6 25 3.6e-05 0.0044 19.2 3.2 1 23 267 289 267 289 0.96

7 25 3.3e-07 4e-05 25.6 1.8 1 23 295 317 295 317 0.98

8 25 3.6e-06 0.00044 22.3 1.0 1 23 323 345 323 345 0.97

9 25 2.7e-06 0.00033 22.7 0.9 1 23 351 373 351 373 0.98

10 25 3.4e-06 0.00041 22.4 1.9 1 23 379 401 379 401 0.98

11 25 0.00028 0.035 16.3 0.2 1 23 407 429 407 429 0.97

12 25 1.3e-05 0.0016 20.5 0.4 1 23 435 457 435 457 0.98

13 25 2.2e-05 0.0027 19.8 5.2 1 23 463 485 463 485 0.97

14 25 2.1e-06 0.00026 23.0 0.8 1 23 491 513 491 513 0.98

15 25 5.4e-05 0.0065 18.6 1.6 1 23 519 541 519 541 0.98

16 25 6e-05 0.0072 18.5 2.4 1 23 547 569 547 569 0.98

17 25 2e-06 0.00024 23.1 1.3 1 23 575 597 575 597 0.96

18 25 1.2e-06 0.00015 23.8 0.8 1 23 603 625 603 625 0.98

19 25 2.6e-06 0.00031 22.8 1.9 1 23 631 653 631 653 0.97

20 25 4.3e-06 0.00052 22.1 1.3 1 23 659 681 659 681 0.98

21 25 1.1e-05 0.0013 20.8 1.2 1 23 687 709 687 709 0.98

22 25 3.2e-05 0.0039 19.3 1.7 1 23 715 737 715 737 0.97

23 25 0.00013 0.016 17.4 2.6 1 23 743 765 743 765 0.89

24 25 2.5e-07 3.1e-05 25.9 0.7 1 23 771 793 771 793 0.96

25 25 9.8e-06 0.0012 21.0 2.6 1 23 799 821 799 821 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00088	0.11	14.8	0.4	2	23	104	125	103	125	0.96
2	25	2.1e-05	0.0025	19.9	1.2	1	23	155	177	155	177	0.96
3	25	1.6e-06	0.00019	23.4	0.9	1	23	183	205	183	205	0.98
4	25	2.3e-06	0.00028	22.9	0.4	1	23	211	233	211	233	0.98
5	25	2e-05	0.0024	20.0	0.6	1	23	239	261	239	261	0.98
6	25	3.6e-05	0.0044	19.2	3.2	1	23	267	289	267	289	0.96
7	25	3.3e-07	4e-05	25.6	1.8	1	23	295	317	295	317	0.98
8	25	3.6e-06	0.00044	22.3	1.0	1	23	323	345	323	345	0.97
9	25	2.7e-06	0.00033	22.7	0.9	1	23	351	373	351	373	0.98
10	25	3.4e-06	0.00041	22.4	1.9	1	23	379	401	379	401	0.98
11	25	0.00028	0.035	16.3	0.2	1	23	407	429	407	429	0.97
12	25	1.3e-05	0.0016	20.5	0.4	1	23	435	457	435	457	0.98
13	25	2.2e-05	0.0027	19.8	5.2	1	23	463	485	463	485	0.97
14	25	2.1e-06	0.00026	23.0	0.8	1	23	491	513	491	513	0.98
15	25	5.4e-05	0.0065	18.6	1.6	1	23	519	541	519	541	0.98
16	25	6e-05	0.0072	18.5	2.4	1	23	547	569	547	569	0.98
17	25	2e-06	0.00024	23.1	1.3	1	23	575	597	575	597	0.96
18	25	1.2e-06	0.00015	23.8	0.8	1	23	603	625	603	625	0.98
19	25	2.6e-06	0.00031	22.8	1.9	1	23	631	653	631	653	0.97
20	25	4.3e-06	0.00052	22.1	1.3	1	23	659	681	659	681	0.98
21	25	1.1e-05	0.0013	20.8	1.2	1	23	687	709	687	709	0.98
22	25	3.2e-05	0.0039	19.3	1.7	1	23	715	737	715	737	0.97
23	25	0.00013	0.016	17.4	2.6	1	23	743	765	743	765	0.89
24	25	2.5e-07	3.1e-05	25.9	0.7	1	23	771	793	771	793	0.96
25	25	9.8e-06	0.0012	21.0	2.6	1	23	799	821	799	821	0.97

Sequence Information

Coding Sequence: ATGGATGCTAAATTGGAGATTAAGGAAGAACCACTGGACAATGAAACATATTCACTTCAGTTGAAATCGGAAATTGAAAGCAACTCTTATGATGATGCTAATAGCACTTTGTTCAAGCATGATATAAAGCAGGAGGAAGAGGTTGACACAGCTTTAATGAAGGAGGAGGTCACAGCTGAGGAATTAAGTTTCCCATGTAGTGATTCGGGgatCCTTATGGAAGACCTTTCAAGCTGCATGGAACCTTCATTTGGACATTTTGTAGATTTTATACTGGAAAATAAAGACAACACAAACAACCAGGTATTGTACTGTAAAGTTTGTGCCAGCACTTTTACTAACTATTCATCTTTGAAAGATCATATATTGATTCATGAAAACAGAACAAATGATATGGACCAACTTTGTGAAAAGGCATCAACTGTGAGTAGCAATAGTTTGATTCTCAGTACCAAGAAGCCCCATAATTGTGAAgcttgtgggaagaactttactaAGGCATCTAATTTGAAgagtcatcttttgattcatgaaggcaagaggccatataagtgtgaagtttgtggaaagaccTTTACACAAGGATTTACTTTAAGGAGACATCtgttgattcatgagggcaaaaagccttataaatgtgaagtttgtggaaagggCTTTATCCAGGCATTCACTCTGAAGAAACATTTATCAGTTCATGAAAGCAGCAATTCCcataaatgtgaggtttgtgGGGCAAGCTTTACCCAAGAATTGACATTGAGGAGGCATATCCTCATACATGAGGGCAAAAAACCACATAATTGTGAactttgtgggaagagctttaccaagGCTTTTCATTTGAGAGACCATCTCTTGATTCATGAGGGAAAGAAgccccataagtgtgaagtttgtgggaaaagctttacacAAGCATCTCATTTAAGGGgtcatattttgattcatgatggcaaaaagccacataaatgtgaaatttgtgggaagagctttacacaAGCTTTCACTTTAAGGGGGcaccttttgattcatgagggcaagaagccccataagtgtgaaatttgtggaaagagcttcaCCCAGGTATCTACTCTGAGaggacatcttttgattcatgatggCTTAAAGCCCCATAAGTGTAAAGTCTGTGGTAAGAGTTTTACTTCAATTCCttatttaaggaaacatcttaTGATTCATGATGATAAGAAGCCCcacaagtgtgaagtttgtggtaagagctttaccCTGGCAGCTGTTTTGAGGGGACATCtcttgattcatgagggcaagaagccacataagtgtgatgTCTGTGGGAAGGGTTTTACAGCAATGTCTAATTTAAGAgtgcatcttttgattcacgaggGAAAGAAATTGCataagtgtaaaatatgtgaaaagagCTTTACTCATATATCTAATTTCAGGAGACAcgttttaattcatgagggtgtaaagccatataaatgtgaaatctGTGGAAAATTCTTTACCAAAGGATCTACTTTGAAGACACATAtcttgattcatgagggcaagaaaccacataaatgtgaagtctgTGAGAAACAATTTACTCTGCTCTCAAATTTGAGGACACATCTtctgattcatgagggtaagaaaaaacataaatgtacAGTGTGTGGTAAGGGGTTTACCCACATATCTAGTATGAAagtacatcttttgattcatgagggcaagaaaccccATAATTGTGATATTTGTGGAAAGAGATTTACTGCAAAATCTAATTTGAGAGCACATCGCTTAATTCATCAGGGCAAGAAATCTCACAAGTGTGacatttgtgggaagagctttactctgGCATCAACTTTAAGGGAACATCttatgattcatgagggcaaaaagccccataaatgtgaaatctgtgagaagagctttaccaAGGCATCTACTTTAAAGAAACATGtattgattcatgagggtaagaagccacataagtgtgaactTTGCGAGAAGAGTTTTACACAGGCATCAACattaagggaacatcttttgattcatgaaggcatAAGGCCTCACAAGTGTGAAATCTGTGAGAAGAGATTTACTGCAATATCTAATTtgagaaaacatattttgattcatgagggtaagaaaagGCATAAATGTGCAGTGTGTGGTAAGGACTTTACCCACATATCTAGTTTGAAaatacatcttttgattcatgagggaaaAAAACCCCATaattgtgaaatttgtggaaagagatTTACTGCAAAATCTAATTTGACAGCACATTGTTTGATTCACcagggcaagaaaccacataagtgtgacatttgtgggaaaagctttacccaAGCATCAACTTTGAGGGTACATCTTTTGgctcatgagggcaagaagccccaTAAATGTGAAGTCTGTGGCAAGTGCTTTATCAAAGCATCTACTTTAAGAACTCATGTATTGATTCATGACAGCAAGAAtctgcatacattttaa
Protein Sequence: MDAKLEIKEEPLDNETYSLQLKSEIESNSYDDANSTLFKHDIKQEEEVDTALMKEEVTAEELSFPCSDSGILMEDLSSCMEPSFGHFVDFILENKDNTNNQVLYCKVCASTFTNYSSLKDHILIHENRTNDMDQLCEKASTVSSNSLILSTKKPHNCEACGKNFTKASNLKSHLLIHEGKRPYKCEVCGKTFTQGFTLRRHLLIHEGKKPYKCEVCGKGFIQAFTLKKHLSVHESSNSHKCEVCGASFTQELTLRRHILIHEGKKPHNCELCGKSFTKAFHLRDHLLIHEGKKPHKCEVCGKSFTQASHLRGHILIHDGKKPHKCEICGKSFTQAFTLRGHLLIHEGKKPHKCEICGKSFTQVSTLRGHLLIHDGLKPHKCKVCGKSFTSIPYLRKHLMIHDDKKPHKCEVCGKSFTLAAVLRGHLLIHEGKKPHKCDVCGKGFTAMSNLRVHLLIHEGKKLHKCKICEKSFTHISNFRRHVLIHEGVKPYKCEICGKFFTKGSTLKTHILIHEGKKPHKCEVCEKQFTLLSNLRTHLLIHEGKKKHKCTVCGKGFTHISSMKVHLLIHEGKKPHNCDICGKRFTAKSNLRAHRLIHQGKKSHKCDICGKSFTLASTLREHLMIHEGKKPHKCEICEKSFTKASTLKKHVLIHEGKKPHKCELCEKSFTQASTLREHLLIHEGIRPHKCEICEKRFTAISNLRKHILIHEGKKRHKCAVCGKDFTHISSLKIHLLIHEGKKPHNCEICGKRFTAKSNLTAHCLIHQGKKPHKCDICGKSFTQASTLRVHLLAHEGKKPHKCEVCGKCFIKASTLRTHVLIHDSKNLHTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00995401;
90% Identity: iTF_00995401;
80% Identity: iTF_00995401;