Mvio013334.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Metallyticus violacea
Gene Symbol
-
Assembly
GCA_030762175.1
Location
CM060833.1:67819901-67822174[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0008 0.097 14.9 0.4 2 23 32 53 31 53 0.96
2 25 1.9e-05 0.0023 20.1 1.2 1 23 83 105 83 105 0.96
3 25 1.4e-06 0.00017 23.6 0.9 1 23 111 133 111 133 0.98
4 25 2.1e-06 0.00026 23.1 0.4 1 23 139 161 139 161 0.98
5 25 1.8e-05 0.0022 20.1 0.6 1 23 167 189 167 189 0.98
6 25 3.3e-05 0.004 19.3 3.2 1 23 195 217 195 217 0.96
7 25 3e-07 3.6e-05 25.7 1.8 1 23 223 245 223 245 0.98
8 25 3.2e-06 0.00039 22.5 1.0 1 23 251 273 251 273 0.97
9 25 2.5e-06 0.0003 22.8 0.9 1 23 279 301 279 301 0.98
10 25 3e-06 0.00037 22.6 1.9 1 23 307 329 307 329 0.98
11 25 0.00026 0.031 16.5 0.2 1 23 335 357 335 357 0.97
12 25 1.2e-05 0.0015 20.7 0.4 1 23 363 385 363 385 0.98
13 25 2e-05 0.0025 20.0 5.2 1 23 391 413 391 413 0.97
14 25 1.9e-06 0.00024 23.2 0.8 1 23 419 441 419 441 0.98
15 25 4.8e-05 0.0059 18.8 1.6 1 23 447 469 447 469 0.98
16 25 5.4e-05 0.0065 18.6 2.4 1 23 475 497 475 497 0.98
17 25 1.8e-06 0.00022 23.3 1.3 1 23 503 525 503 525 0.96
18 25 1.1e-06 0.00013 23.9 0.8 1 23 531 553 531 553 0.98
19 25 2.3e-06 0.00028 22.9 1.9 1 23 559 581 559 581 0.97
20 25 3.9e-06 0.00047 22.2 1.3 1 23 587 609 587 609 0.98
21 25 9.5e-06 0.0012 21.0 1.2 1 23 615 637 615 637 0.98
22 25 2.9e-05 0.0035 19.5 1.7 1 23 643 665 643 665 0.97
23 25 0.00012 0.014 17.5 2.6 1 23 671 693 671 693 0.89
24 25 2.3e-07 2.8e-05 26.1 0.7 1 23 699 721 699 721 0.96
25 25 8.8e-06 0.0011 21.1 2.6 1 23 727 749 727 749 0.97

Sequence Information

Coding Sequence
ATGGAAGACCTTTCAAGCTGCATGGAACCTTCATTTGGACATTTTGTAGATTTTATACTGGAAAATAAAGACAACACAAACAACCAGGTATTGTACTGTAAAGTTTGTGCCAGCACTTTTACTAACTATTCATCTTTGAAAGATCATATATTGATTCATGAAAACAGAACAAATGATATGGACCAACTTTGTGAAAAGGCATCAACTGTGAGTAGCAATAGTTTGATTCTCAGTACCAAGAAGCCCCATAATTGTGAAgcttgtgggaagaactttactaAGGCATCTAATTTGAAgagtcatcttttgattcatgaaggcaagaggccatataagtgtgaagtttgtggaaagaccTTTACACAAGGATTTACTTTAAGGAGACATCtgttgattcatgagggcaaaaagccttataaatgtgaagtttgtggaaagggCTTTATCCAGGCATTCACTCTGAAGAAACATTTATCAGTTCATGAAAGCAGCAATTCCcataaatgtgaggtttgtgGGGCAAGCTTTACCCAAGAATTGACATTGAGGAGGCATATCCTCATACATGAGGGCAAAAAACCACATAATTGTGAactttgtgggaagagctttaccaagGCTTTTCATTTGAGAGACCATCTCTTGATTCATGAGGGAAAGAAgccccataagtgtgaagtttgtgggaaaagctttacacAAGCATCTCATTTAAGGGgtcatattttgattcatgatggcaaaaagccacataaatgtgaaatttgtgggaagagctttacacaAGCTTTCACTTTAAGGGGGcaccttttgattcatgagggcaagaagccccataagtgtgaaatttgtggaaagagcttcaCCCAGGTATCTACTCTGAGaggacatcttttgattcatgatggCTTAAAGCCCCATAAGTGTAAAGTCTGTGGTAAGAGTTTTACTTCAATTCCttatttaaggaaacatcttaTGATTCATGATGATAAGAAGCCCcacaagtgtgaagtttgtggtaagagctttaccCTGGCAGCTGTTTTGAGGGGACATCtcttgattcatgagggcaagaagccacataagtgtgatgTCTGTGGGAAGGGTTTTACAGCAATGTCTAATTTAAGAgtgcatcttttgattcacgaggGAAAGAAATTGCataagtgtaaaatatgtgaaaagagCTTTACTCATATATCTAATTTCAGGAGACAcgttttaattcatgagggtgtaaagccatataaatgtgaaatctGTGGAAAATTCTTTACCAAAGGATCTACTTTGAAGACACATAtcttgattcatgagggcaagaaaccacataaatgtgaagtctgTGAGAAACAATTTACTCTGCTCTCAAATTTGAGGACACATCTtctgattcatgagggtaagaaaaaacataaatgtacAGTGTGTGGTAAGGGGTTTACCCACATATCTAGTATGAAagtacatcttttgattcatgagggcaagaaaccccATAATTGTGATATTTGTGGAAAGAGATTTACTGCAAAATCTAATTTGAGAGCACATCGCTTAATTCATCAGGGCAAGAAATCTCACAAGTGTGacatttgtgggaagagctttactctgGCATCAACTTTAAGGGAACATCttatgattcatgagggcaaaaagccccataaatgtgaaatctgtgagaagagctttaccaAGGCATCTACTTTAAAGAAACATGtattgattcatgagggtaagaagccacataagtgtgaactTTGCGAGAAGAGTTTTACACAGGCATCAACattaagggaacatcttttgattcatgaaggcatAAGGCCTCACAAGTGTGAAATCTGTGAGAAGAGATTTACTGCAATATCTAATTtgagaaaacatattttgattcatgagggtaagaaaagGCATAAATGTGCAGTGTGTGGTAAGGACTTTACCCACATATCTAGTTTGAAaatacatcttttgattcatgagggaaaAAAACCCCATaattgtgaaatttgtggaaagagatTTACTGCAAAATCTAATTTGACAGCACATTGTTTGATTCACcagggcaagaaaccacataagtgtgacatttgtgggaaaagctttacccaAGCATCAACTTTGAGGGTACATCTTTTGgctcatgagggcaagaagccccaTAAATGTGAAGTCTGTGGCAAGTGCTTTATCAAAGCATCTACTTTAAGAACTCATGTATTGATTCATGACAGCAAGAAtctgcatacattttaa
Protein Sequence
MEDLSSCMEPSFGHFVDFILENKDNTNNQVLYCKVCASTFTNYSSLKDHILIHENRTNDMDQLCEKASTVSSNSLILSTKKPHNCEACGKNFTKASNLKSHLLIHEGKRPYKCEVCGKTFTQGFTLRRHLLIHEGKKPYKCEVCGKGFIQAFTLKKHLSVHESSNSHKCEVCGASFTQELTLRRHILIHEGKKPHNCELCGKSFTKAFHLRDHLLIHEGKKPHKCEVCGKSFTQASHLRGHILIHDGKKPHKCEICGKSFTQAFTLRGHLLIHEGKKPHKCEICGKSFTQVSTLRGHLLIHDGLKPHKCKVCGKSFTSIPYLRKHLMIHDDKKPHKCEVCGKSFTLAAVLRGHLLIHEGKKPHKCDVCGKGFTAMSNLRVHLLIHEGKKLHKCKICEKSFTHISNFRRHVLIHEGVKPYKCEICGKFFTKGSTLKTHILIHEGKKPHKCEVCEKQFTLLSNLRTHLLIHEGKKKHKCTVCGKGFTHISSMKVHLLIHEGKKPHNCDICGKRFTAKSNLRAHRLIHQGKKSHKCDICGKSFTLASTLREHLMIHEGKKPHKCEICEKSFTKASTLKKHVLIHEGKKPHKCELCEKSFTQASTLREHLLIHEGIRPHKCEICEKRFTAISNLRKHILIHEGKKRHKCAVCGKDFTHISSLKIHLLIHEGKKPHNCEICGKRFTAKSNLTAHCLIHQGKKPHKCDICGKSFTQASTLRVHLLAHEGKKPHKCEVCGKCFIKASTLRTHVLIHDSKNLHTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00995402;
90% Identity
iTF_00995402;
80% Identity
iTF_00995402;