Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060845.1:13240422-13270480[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.023 2.8 10.3 0.9 8 23 40 55 39 55 0.96

2 25 5.9e-06 0.00072 21.6 0.4 1 23 61 83 61 83 0.97

3 25 6.2e-06 0.00075 21.6 0.7 1 23 89 111 89 111 0.97

4 25 0.00013 0.016 17.4 5.3 1 20 117 136 117 139 0.93

5 25 1.5e-06 0.00018 23.5 1.1 1 23 145 167 145 167 0.95

6 25 1.4e-05 0.0017 20.5 1.6 1 23 173 195 173 195 0.95

7 25 2.1e-05 0.0026 19.9 0.9 1 23 201 223 201 223 0.98

8 25 3.1e-06 0.00038 22.5 1.3 1 23 229 251 229 251 0.98

9 25 0.0002 0.025 16.8 1.0 1 23 257 279 257 279 0.96

10 25 1e-06 0.00013 24.0 0.9 1 23 285 307 285 307 0.98

11 25 3.5e-06 0.00043 22.4 1.0 1 23 313 335 313 335 0.98

12 25 7.7e-07 9.3e-05 24.4 1.0 1 23 341 363 341 363 0.98

13 25 2.9e-06 0.00036 22.6 1.1 1 23 369 391 369 391 0.98

14 25 1.6e-06 0.00019 23.5 4.6 1 23 397 419 397 419 0.97

15 25 1.5e-05 0.0018 20.4 1.4 1 23 425 447 425 447 0.98

16 25 1.8e-05 0.0022 20.1 2.3 1 23 453 475 453 475 0.97

17 25 3.4e-06 0.00041 22.4 4.4 1 20 481 500 481 503 0.93

18 25 2.5e-05 0.0031 19.7 5.0 1 23 509 531 509 531 0.98

19 25 0.0012 0.14 14.4 0.9 1 23 537 559 537 559 0.96

20 25 3.3e-06 0.0004 22.4 0.8 1 23 565 587 565 587 0.98

21 25 1.3e-05 0.0016 20.5 1.0 1 23 593 615 593 615 0.98

22 25 4.2e-07 5.1e-05 25.3 0.9 1 23 621 643 621 643 0.98

23 25 8.2e-07 0.0001 24.3 0.8 1 23 649 671 649 671 0.98

24 25 0.0027 0.33 13.3 3.1 1 23 677 699 677 699 0.97

25 25 0.0021 0.26 13.6 1.3 5 23 709 727 707 727 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.023	2.8	10.3	0.9	8	23	40	55	39	55	0.96
2	25	5.9e-06	0.00072	21.6	0.4	1	23	61	83	61	83	0.97
3	25	6.2e-06	0.00075	21.6	0.7	1	23	89	111	89	111	0.97
4	25	0.00013	0.016	17.4	5.3	1	20	117	136	117	139	0.93
5	25	1.5e-06	0.00018	23.5	1.1	1	23	145	167	145	167	0.95
6	25	1.4e-05	0.0017	20.5	1.6	1	23	173	195	173	195	0.95
7	25	2.1e-05	0.0026	19.9	0.9	1	23	201	223	201	223	0.98
8	25	3.1e-06	0.00038	22.5	1.3	1	23	229	251	229	251	0.98
9	25	0.0002	0.025	16.8	1.0	1	23	257	279	257	279	0.96
10	25	1e-06	0.00013	24.0	0.9	1	23	285	307	285	307	0.98
11	25	3.5e-06	0.00043	22.4	1.0	1	23	313	335	313	335	0.98
12	25	7.7e-07	9.3e-05	24.4	1.0	1	23	341	363	341	363	0.98
13	25	2.9e-06	0.00036	22.6	1.1	1	23	369	391	369	391	0.98
14	25	1.6e-06	0.00019	23.5	4.6	1	23	397	419	397	419	0.97
15	25	1.5e-05	0.0018	20.4	1.4	1	23	425	447	425	447	0.98
16	25	1.8e-05	0.0022	20.1	2.3	1	23	453	475	453	475	0.97
17	25	3.4e-06	0.00041	22.4	4.4	1	20	481	500	481	503	0.93
18	25	2.5e-05	0.0031	19.7	5.0	1	23	509	531	509	531	0.98
19	25	0.0012	0.14	14.4	0.9	1	23	537	559	537	559	0.96
20	25	3.3e-06	0.0004	22.4	0.8	1	23	565	587	565	587	0.98
21	25	1.3e-05	0.0016	20.5	1.0	1	23	593	615	593	615	0.98
22	25	4.2e-07	5.1e-05	25.3	0.9	1	23	621	643	621	643	0.98
23	25	8.2e-07	0.0001	24.3	0.8	1	23	649	671	649	671	0.98
24	25	0.0027	0.33	13.3	3.1	1	23	677	699	677	699	0.97
25	25	0.0021	0.26	13.6	1.3	5	23	709	727	707	727	0.94

Sequence Information

Coding Sequence: ATGAATATCAATTCAGACATTAAAGAAGAACATAAGGATACTGATACCTGTTCACTTCAGTTGAAACAACCAGAAACTCATGGGGATAATTCCTATCATGCTCATGATCCTGAGTTAAAGAGCTTTACCCGGTTATCTTCTTTAAGGAGACATATTTtgctgcatgagggtaagaagccacataaatgtgaagtttgtgggaagagctttccCCTGGCTTACAATTTAAGGGTACATCTTTTGCTGCATGAGGGTAAGaggccacataaatgtgaagtttgtgggaagagctttacccaggtAGCTACTTTAAGGGTACATCTTTTGCTGCATGAGggaaagaaaccacataaatgtggaGTTTGTGGGCACAGCTTTACACAGCCACatcatttaaggagacatctttggatgcatgagggtaagaaaccacatcaatgtgaagtttgtgggaaaggCTTTACTCAGGCATCGGACTTAAAGAGGCATTTTTtgctgcatgagggtaagaaaccacataaatgtgaagtttgtgagaagggCTTTACCCAGGCATCAGACTTAAAGAGGCATTTTTTGCTGCATGAGGggaagaaaccacataaatgtgaagtttgtgagaggGGCTTTACCCAGGCATCTACTTTAAGGttacatcttttgatgcatgagcgtaaaaaacaacataaatgtgaaatttgtgggaaatcCTTTACCCATGCATCTGCTGTAAaggaacatcttttgatacatgagggtaagaaaccacataaatgtgaagtttgtgggaagagctttacctggtCATCTGTATTAAGGAGACATGTTTtgctgcatgagggtaagaaaccacataaatgtgaagtttgtgggaagaactttactcAGGCATCTactttaagggaacatcttttgatacatgagggtaagaaaccacataagtgtgaagtttgtgggaaaagctttacccgGGTATCTACTTTAAGgggacatcttttgatacatgagggtaagaaaccacataaatgtgaagtttgtgggaagagctttacccaggcatctactttaaggggacatcttttgatgcatgagcgaaagaaaccacataaatgtgaagtttgtgggaagaactttaccaGGGTATCTACTTTAAGGgtacatcttttgatacatgagggtaagaaaccacatcaatgtgaagtttgtgggaagcgCTTTACCCATACATCTAACTTAAAGAGGCATCTTTTGCTGCAtgagggtgagaaaccacataaatgtcaAGTTTGTGAGAAGGGCTTTACCCAGGCATCTACTTTAAGGttacatcttttgatgcatgagggtaaaaaaccacataaatgtgaagtttgttgGAAGAGCTTTACCCGAACATCTTCGTTAAGAATGCATCTTTTGctacatgagggtaagaaaccacataaatgtgaagtttgtggtaagagctttacaCATCCACATAATTTAAAGAGACATCTTTGGATGCATGAggatgagaaaccacataaatgtgaagtttgtgggaaatgCTTCACCCATTCATCTGTTTTAAAagaacatcttttgatacatgagggtaagaaaccacataaatgtgaagcttgtgggaagagctttacctggaCATCTGCATTAAGGAGACATGTTTTGTTGCATgatggtaagaaaccacataaatgtgaagtttgtgggaagaactttacccaggcatctactttaaggggacatcttttgatacatgagggtaagaaaccacataaatgtgaggtttgtgggaaaaactttacCCGGGTATCTACTTTAAGgggacatcttttgatacatgagggtaagaaaccatataaatgtgaagtttgtgggaagagctttacccatgcATCTACTTTAAGgggacatcttttgatacatgtgggtaagaaaccacataaatgtgaagtttgtgggaagagctttacccaggcatctaCTTTAAGGGGACATCTTTTGGTGCATGAGGGAAAGAAACCAcatcaatgtgaagtttgtgggaagagatTTACCTGGATATGTGacttaaggaaacatcttttgatgcacaaGGCTAAGAATCCACATAAACGTGAAGTTTGTAGGAAGAGCTTTACCCGGGCATCTACTTTAAAGGTACACCATTTGCAGCATGAGGGAGGCATACCTCCCGATATCCTCCCATCACCAGCACCACACACTATGCTCTACTTGTCTCCAATTTGCAATAAACTCCCCCTCAGGGTGGCTATGCTAGGCGAACTTGACCTCGACGCAGCTGGTACCGTCTTACTCAAGCTCCTGACCTACTTTGCTTCGCCAGTTCAACGGCAGAAGCAGACTCCCTCTTATCCGGTGATATTTTCCGCATCTGTGGTGTCATTCACTCCTGCTCTTTAA
Protein Sequence: MNINSDIKEEHKDTDTCSLQLKQPETHGDNSYHAHDPELKSFTRLSSLRRHILLHEGKKPHKCEVCGKSFPLAYNLRVHLLLHEGKRPHKCEVCGKSFTQVATLRVHLLLHEGKKPHKCGVCGHSFTQPHHLRRHLWMHEGKKPHQCEVCGKGFTQASDLKRHFLLHEGKKPHKCEVCEKGFTQASDLKRHFLLHEGKKPHKCEVCERGFTQASTLRLHLLMHERKKQHKCEICGKSFTHASAVKEHLLIHEGKKPHKCEVCGKSFTWSSVLRRHVLLHEGKKPHKCEVCGKNFTQASTLREHLLIHEGKKPHKCEVCGKSFTRVSTLRGHLLIHEGKKPHKCEVCGKSFTQASTLRGHLLMHERKKPHKCEVCGKNFTRVSTLRVHLLIHEGKKPHQCEVCGKRFTHTSNLKRHLLLHEGEKPHKCQVCEKGFTQASTLRLHLLMHEGKKPHKCEVCWKSFTRTSSLRMHLLLHEGKKPHKCEVCGKSFTHPHNLKRHLWMHEDEKPHKCEVCGKCFTHSSVLKEHLLIHEGKKPHKCEACGKSFTWTSALRRHVLLHDGKKPHKCEVCGKNFTQASTLRGHLLIHEGKKPHKCEVCGKNFTRVSTLRGHLLIHEGKKPYKCEVCGKSFTHASTLRGHLLIHVGKKPHKCEVCGKSFTQASTLRGHLLVHEGKKPHQCEVCGKRFTWICDLRKHLLMHKAKNPHKREVCRKSFTRASTLKVHHLQHEGGIPPDILPSPAPHTMLYLSPICNKLPLRVAMLGELDLDAAGTVLLKLLTYFASPVQRQKQTPSYPVIFSASVVSFTPAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00995929;
90% Identity: iTF_00995929;
80% Identity: iTF_00995929;