Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060830.1:16653299-16701175[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 7.8e-06 0.00094 21.3 0.5 1 23 85 107 85 107 0.98

2 27 0.00027 0.033 16.4 0.4 1 23 112 134 112 134 0.98

3 27 7.4e-06 0.00089 21.3 3.2 1 23 140 162 140 162 0.97

4 27 0.48 59 6.2 0.4 5 23 169 190 168 190 0.86

5 27 8.9e-06 0.0011 21.1 0.9 3 23 198 218 196 218 0.95

6 27 6.3e-05 0.0077 18.4 0.8 1 23 224 246 224 246 0.98

7 27 2.3e-05 0.0028 19.8 0.1 1 23 252 274 252 274 0.98

8 27 1.9e-05 0.0023 20.1 1.1 2 23 281 302 280 302 0.96

9 27 7.4e-06 0.0009 21.3 3.5 1 23 328 350 328 350 0.95

10 27 4e-05 0.0049 19.0 1.6 1 23 356 378 356 378 0.98

11 27 1.2e-06 0.00015 23.8 0.7 1 23 384 406 384 406 0.97

12 27 4.1e-07 4.9e-05 25.3 1.0 1 23 412 434 412 434 0.98

13 27 6e-05 0.0073 18.5 3.1 1 23 440 462 440 462 0.97

14 27 1.1e-05 0.0013 20.8 3.2 1 23 468 490 468 490 0.98

15 27 4.1e-05 0.005 19.0 2.9 2 23 497 518 496 518 0.94

16 27 1.2e-06 0.00015 23.8 4.0 1 23 524 546 524 546 0.98

17 27 6.7e-07 8.1e-05 24.6 0.6 1 23 552 574 552 574 0.97

18 27 8.1e-09 9.9e-07 30.6 1.6 1 23 580 602 580 602 0.98

19 27 3.1e-06 0.00037 22.5 0.9 1 23 608 630 608 630 0.98

20 27 2.9e-06 0.00035 22.6 2.2 1 23 636 658 636 658 0.98

21 27 2.4e-07 2.9e-05 26.0 1.0 1 23 664 686 664 686 0.98

22 27 4.2e-05 0.0051 19.0 2.5 1 23 692 714 692 714 0.96

23 27 8.3e-05 0.01 18.0 0.5 1 23 779 801 779 801 0.98

24 27 2.3e-05 0.0028 19.8 1.7 1 23 807 829 807 829 0.96

25 27 5e-08 6e-06 28.2 2.5 1 23 835 857 835 857 0.98

26 27 3.8e-08 4.7e-06 28.5 1.0 1 23 863 885 863 885 0.98

27 27 6.1e-08 7.5e-06 27.9 1.7 1 23 891 913 891 913 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	7.8e-06	0.00094	21.3	0.5	1	23	85	107	85	107	0.98
2	27	0.00027	0.033	16.4	0.4	1	23	112	134	112	134	0.98
3	27	7.4e-06	0.00089	21.3	3.2	1	23	140	162	140	162	0.97
4	27	0.48	59	6.2	0.4	5	23	169	190	168	190	0.86
5	27	8.9e-06	0.0011	21.1	0.9	3	23	198	218	196	218	0.95
6	27	6.3e-05	0.0077	18.4	0.8	1	23	224	246	224	246	0.98
7	27	2.3e-05	0.0028	19.8	0.1	1	23	252	274	252	274	0.98
8	27	1.9e-05	0.0023	20.1	1.1	2	23	281	302	280	302	0.96
9	27	7.4e-06	0.0009	21.3	3.5	1	23	328	350	328	350	0.95
10	27	4e-05	0.0049	19.0	1.6	1	23	356	378	356	378	0.98
11	27	1.2e-06	0.00015	23.8	0.7	1	23	384	406	384	406	0.97
12	27	4.1e-07	4.9e-05	25.3	1.0	1	23	412	434	412	434	0.98
13	27	6e-05	0.0073	18.5	3.1	1	23	440	462	440	462	0.97
14	27	1.1e-05	0.0013	20.8	3.2	1	23	468	490	468	490	0.98
15	27	4.1e-05	0.005	19.0	2.9	2	23	497	518	496	518	0.94
16	27	1.2e-06	0.00015	23.8	4.0	1	23	524	546	524	546	0.98
17	27	6.7e-07	8.1e-05	24.6	0.6	1	23	552	574	552	574	0.97
18	27	8.1e-09	9.9e-07	30.6	1.6	1	23	580	602	580	602	0.98
19	27	3.1e-06	0.00037	22.5	0.9	1	23	608	630	608	630	0.98
20	27	2.9e-06	0.00035	22.6	2.2	1	23	636	658	636	658	0.98
21	27	2.4e-07	2.9e-05	26.0	1.0	1	23	664	686	664	686	0.98
22	27	4.2e-05	0.0051	19.0	2.5	1	23	692	714	692	714	0.96
23	27	8.3e-05	0.01	18.0	0.5	1	23	779	801	779	801	0.98
24	27	2.3e-05	0.0028	19.8	1.7	1	23	807	829	807	829	0.96
25	27	5e-08	6e-06	28.2	2.5	1	23	835	857	835	857	0.98
26	27	3.8e-08	4.7e-06	28.5	1.0	1	23	863	885	863	885	0.98
27	27	6.1e-08	7.5e-06	27.9	1.7	1	23	891	913	891	913	0.98

Sequence Information

Coding Sequence: ATGGATTACAAATCAGAGTTCAAGGAGAAACCGGACCCTATTGAAGATACACTTAAGCTTAAATCCAAAATTCTTGAAGAGATTGCATATAAAGTTGGCCATGACACTATTTTGGAAAATGAGGTGAAGGAACAGAAAGAGCTTGACATAGCTGTATTGAAAGAGGAGATCACAATTGAAGAAACAGACTTACCGTACAGTGATGCAAGGCTTTACTACCGCATATACTTTGAAGACACATCCAAGAAGCtacataagtgtgaaatttgtgggaagaatGTTACCCGGGCATCTTCTTTGAGggatcatcttttgattcataaggagaagccacataagtgtgaaatttgtgggaagaatATAAGCGGGGCATCTTCTTTGAGGTTACATCGTATGATTCATGAGGGGAAGAAgccccataagtgtgaagtttgtgggaagaactttacccaggcatctcatttgaaagaacattttttgattcatgagggaaagaaatcacataaatgtgaTATCTATATAAAAAGCTTCACTGCTGCATCTACTTTGAagtcacatcttttgattcatgagggcaagacaCCCCATTTGTGTGaactttgtggaaagagttttatctATGCATCCTATTTGAGAAAGCATCTTTTGGTTCATGAGCATACAAAAccccataagtgtgaagtttgtgacAAGAGCTATACCAAAGCATCTGTTTTGAGggatcatcttttgattcatgagggcaagaagccatataaatgtgaGGTTTGTGGTAAGGGCTTAACCAAAGCTTCTTCTTTGAGGAATCATGTTTTggttcatgagggcaagaaaccctgcaagtgtgaagtttgtggcaagagcTATACCAAAGCAACTGCTTTGAGgaatcatcttttaattcatgagggcaagaagctatataaatatgaaGTATCAGCCTTAAGAAACCATACTTTGAGTCATGAGCACAAGAAGATCCACGAGTGTGAactttgtgggaagagtttttcCCAGTCATCTAAGTTAAAGAAGCATTTTCTGAATCATGAGGCCAATAAttctcataaatgtgaagtttgtgcaaAGAATTTTTCTTATGCATCTACATTAAGAaagcatcttttgattcatgaggccAAGAAACCACAtacatgtgaagtttgtgggaagaactttacgcAAGCATCTTCTTTGAGAGATCATCTTCTGATTCACGAGGGCAAGAAAtcccataaatgtgaagtttgtggaaagggATTTACCCAAGCTTCTACTTTgcggaaacatcttttgattcatgagggtaagaggCTTCATATGTGTGAACTTTGTGGGAAAAGTTTTACCCATGCTTTTACTTTGAGGGGACATCTTTTAACTCATGAAGGCaaaaagccacataagtgtgagtTTTGTGGGGAAAACTTTTCACAGTCATCACATTTGAgggaacatcttttaattcatgagggcaagaagccctGTAAGTGTGaattttgtggaaagagctttgcCCAGTTATCAAATTTAAGGGAACATTTTCTAAACCATAAGGGCAATAAGCCTCATAAGTGCaaagtttgtgagaagagctttacccatCCTTCTGATTTGAGGaagcatcttttgattcatgagggcaagaaaccacataaatgtgaaatttgtggcaagagctttacccaggcatctTCTTTGAAGGGACatgttttgattcatgagggcaacaAACCttataagtgtgaagtttgtgggaagagctttacacaTCCATCTAACTTGAGGaagcatcttttaattcatgagggcaagaagccacataaatgtgaaatttgtggaaagagctttacccaagTATCTACTTTGAGGGGacaccttttgattcatgagggcaataaatatcataaatgtgaagtttgtgagaagagctttacccatCCATCTAATTTGAggggacatcttttgattcatgatggcaagaagccacataaatgtgaaatatgtggaaagagctttacaaAAGCATCTTCTTTAAgggtacatcttttgattcatgaaggcaaaaaaccacataagtgtgaagtttgtgggagaGGTTTCACTCAGACATCTCATTTGAGAATCCACAGTTTAGTTCATAGTTACTTTGAGAAGGGAAATGTCAAACTAGAGCTTAAGGAAGAACCACAGGACCAAGACACATATTCACATGCAATGGCAGTGGAAAATGAGGATGAGACTTGTTATGCTGCTCATAATGCCATTttggagaaagaaataaaaGGATCTTCTTTGCAGCAACATCTTTCAATTCATGAAGGCAAGAAGCTTTATATGTGTGAATATTGTGGAAAAAGTTTTACCACAGCTTTTATTTTGAGAGGACATCTTTTAACTCACGAGGGCAAGAAACCCCATATGTGTGaattttgtgggaaaaactttTCACAGTCATCATATTTAAGGGGACATCTTTTAAtacatgagggcaagaagccctataaatgtgaagtttgtaagAAGAGTTTTTCACATCCATCTAATTTGAGGaggcatcttttgattcatgagggcaggaagccacataaatgtgaaatttgtgggaagagctttatccagGCATCTAATTTgagaaaacatcttttgattcatgaaggcaacAAACCttataagtgtgaagtttgtgagaagagctttagcCATCCATCTAATTTGAGGAAGCACCTTTTGATTCAttag
Protein Sequence: MDYKSEFKEKPDPIEDTLKLKSKILEEIAYKVGHDTILENEVKEQKELDIAVLKEEITIEETDLPYSDARLYYRIYFEDTSKKLHKCEICGKNVTRASSLRDHLLIHKEKPHKCEICGKNISGASSLRLHRMIHEGKKPHKCEVCGKNFTQASHLKEHFLIHEGKKSHKCDIYIKSFTAASTLKSHLLIHEGKTPHLCELCGKSFIYASYLRKHLLVHEHTKPHKCEVCDKSYTKASVLRDHLLIHEGKKPYKCEVCGKGLTKASSLRNHVLVHEGKKPCKCEVCGKSYTKATALRNHLLIHEGKKLYKYEVSALRNHTLSHEHKKIHECELCGKSFSQSSKLKKHFLNHEANNSHKCEVCAKNFSYASTLRKHLLIHEAKKPHTCEVCGKNFTQASSLRDHLLIHEGKKSHKCEVCGKGFTQASTLRKHLLIHEGKRLHMCELCGKSFTHAFTLRGHLLTHEGKKPHKCEFCGENFSQSSHLREHLLIHEGKKPCKCEFCGKSFAQLSNLREHFLNHKGNKPHKCKVCEKSFTHPSDLRKHLLIHEGKKPHKCEICGKSFTQASSLKGHVLIHEGNKPYKCEVCGKSFTHPSNLRKHLLIHEGKKPHKCEICGKSFTQVSTLRGHLLIHEGNKYHKCEVCEKSFTHPSNLRGHLLIHDGKKPHKCEICGKSFTKASSLRVHLLIHEGKKPHKCEVCGRGFTQTSHLRIHSLVHSYFEKGNVKLELKEEPQDQDTYSHAMAVENEDETCYAAHNAILEKEIKGSSLQQHLSIHEGKKLYMCEYCGKSFTTAFILRGHLLTHEGKKPHMCEFCGKNFSQSSYLRGHLLIHEGKKPYKCEVCKKSFSHPSNLRRHLLIHEGRKPHKCEICGKSFIQASNLRKHLLIHEGNKPYKCEVCEKSFSHPSNLRKHLLIH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00995962;
90% Identity: iTF_00995962;
80% Identity: iTF_00995962;