Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060837.1:3365316-3367775[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.00022 0.027 16.7 1.5 2 23 9 30 8 30 0.97

2 29 1.2e-07 1.4e-05 27.0 1.3 1 23 36 58 36 58 0.96

3 29 1e-07 1.2e-05 27.2 1.7 1 23 64 86 64 86 0.98

4 29 2.4e-05 0.003 19.7 0.9 1 23 92 114 92 114 0.98

5 29 1.7e-05 0.002 20.2 1.0 1 23 120 142 120 142 0.98

6 29 9.9e-07 0.00012 24.1 2.7 1 23 148 170 148 170 0.97

7 29 8.9e-06 0.0011 21.1 1.5 1 23 176 198 176 198 0.97

8 29 1.7e-05 0.002 20.2 0.2 2 23 205 226 204 226 0.97

9 29 2.2e-06 0.00026 23.0 0.8 2 23 233 254 233 254 0.97

10 29 0.00015 0.019 17.2 1.0 1 23 260 282 260 282 0.94

11 29 1.1e-05 0.0013 20.8 1.4 1 23 288 310 288 310 0.97

12 29 1.5e-06 0.00019 23.5 0.8 1 23 316 338 316 338 0.96

13 29 4.1e-07 5e-05 25.3 2.0 1 23 344 366 344 366 0.97

14 29 7.8e-05 0.0094 18.1 0.8 1 23 372 394 372 394 0.98

15 29 0.0019 0.23 13.8 3.5 1 23 400 422 400 422 0.97

16 29 0.00016 0.02 17.1 0.7 1 23 428 450 428 450 0.96

17 29 5.9e-08 7.1e-06 27.9 1.1 1 23 456 478 456 478 0.97

18 29 0.00014 0.017 17.3 1.1 1 23 484 506 484 506 0.97

19 29 6.6e-05 0.008 18.3 1.8 1 23 512 534 512 534 0.98

20 29 7.4e-07 8.9e-05 24.5 1.9 1 23 540 562 540 562 0.98

21 29 1.3e-07 1.6e-05 26.9 1.1 1 23 568 590 568 590 0.96

22 29 1.7e-05 0.002 20.2 1.0 1 23 596 618 596 618 0.98

23 29 0.0013 0.16 14.2 1.3 2 23 625 646 624 646 0.95

24 29 1.1e-05 0.0014 20.8 0.7 1 23 652 674 652 674 0.98

25 29 8.4e-07 0.0001 24.3 0.8 1 23 680 702 680 702 0.97

26 29 3e-05 0.0037 19.4 1.4 1 23 708 730 708 730 0.97

27 29 1.2e-05 0.0014 20.7 0.5 1 23 736 758 736 758 0.96

28 29 0.0028 0.35 13.2 2.0 1 23 764 786 764 786 0.97

29 29 5.8e-07 7e-05 24.8 3.0 1 23 792 814 792 814 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.00022	0.027	16.7	1.5	2	23	9	30	8	30	0.97
2	29	1.2e-07	1.4e-05	27.0	1.3	1	23	36	58	36	58	0.96
3	29	1e-07	1.2e-05	27.2	1.7	1	23	64	86	64	86	0.98
4	29	2.4e-05	0.003	19.7	0.9	1	23	92	114	92	114	0.98
5	29	1.7e-05	0.002	20.2	1.0	1	23	120	142	120	142	0.98
6	29	9.9e-07	0.00012	24.1	2.7	1	23	148	170	148	170	0.97
7	29	8.9e-06	0.0011	21.1	1.5	1	23	176	198	176	198	0.97
8	29	1.7e-05	0.002	20.2	0.2	2	23	205	226	204	226	0.97
9	29	2.2e-06	0.00026	23.0	0.8	2	23	233	254	233	254	0.97
10	29	0.00015	0.019	17.2	1.0	1	23	260	282	260	282	0.94
11	29	1.1e-05	0.0013	20.8	1.4	1	23	288	310	288	310	0.97
12	29	1.5e-06	0.00019	23.5	0.8	1	23	316	338	316	338	0.96
13	29	4.1e-07	5e-05	25.3	2.0	1	23	344	366	344	366	0.97
14	29	7.8e-05	0.0094	18.1	0.8	1	23	372	394	372	394	0.98
15	29	0.0019	0.23	13.8	3.5	1	23	400	422	400	422	0.97
16	29	0.00016	0.02	17.1	0.7	1	23	428	450	428	450	0.96
17	29	5.9e-08	7.1e-06	27.9	1.1	1	23	456	478	456	478	0.97
18	29	0.00014	0.017	17.3	1.1	1	23	484	506	484	506	0.97
19	29	6.6e-05	0.008	18.3	1.8	1	23	512	534	512	534	0.98
20	29	7.4e-07	8.9e-05	24.5	1.9	1	23	540	562	540	562	0.98
21	29	1.3e-07	1.6e-05	26.9	1.1	1	23	568	590	568	590	0.96
22	29	1.7e-05	0.002	20.2	1.0	1	23	596	618	596	618	0.98
23	29	0.0013	0.16	14.2	1.3	2	23	625	646	624	646	0.95
24	29	1.1e-05	0.0014	20.8	0.7	1	23	652	674	652	674	0.98
25	29	8.4e-07	0.0001	24.3	0.8	1	23	680	702	680	702	0.97
26	29	3e-05	0.0037	19.4	1.4	1	23	708	730	708	730	0.97
27	29	1.2e-05	0.0014	20.7	0.5	1	23	736	758	736	758	0.96
28	29	0.0028	0.35	13.2	2.0	1	23	764	786	764	786	0.97
29	29	5.8e-07	7e-05	24.8	3.0	1	23	792	814	792	814	0.98

Sequence Information

Coding Sequence: aTGCCAGAAGGCACCAAGCCAGATAAATGTGAGGTTTGTGGAAAGATCTTTACCTTAGCATGTCATTTACAAatgcatcttttgattcatgagaacAACAAATTACatgaatgtgaaatttgtgggaagaccTTTAACCAGGCTTCTAATTTAAGAAAACATCTTTatattcatgagggtaagaaaccacataagtgtgaagtttgtgggaagagctttaacagggcatataatttaacaaagcatcttttgattcatgagggtaaaaaaccacacaagtgtgaaatttgtgggaagagttttaacTGGGCATATAATTTATCAaagcatcttttgattcatgaaggtaagaaaccacataagtgtgaagtttgtgggaagagttttaactgggcatataatttaacaaaacatcttttaattcatgagggcaagaaaccacataaatgtgaaatttgtggaaagaccTTTACCCAGGCTTTtaatttaaggaaacattttttgattcatgagggtaagaaaacACATAAGTGCGAAGTTTGTGATAAGAGCTTTACTCTGGCATCtgatttaacaaaacattttttggttcatgaggataaaatatcatctgagTGTCAAGTTTGTGGGGAGAGCTTTACCGAGGCatctaaattaacaaaacatcttttgattcatgaggacaAAATACCAAATGAGTGTGAAGTGTGTAAAAAGAGGTTTAACAGTGCATCAAATTTAAAGAAGCATCTTTTGGTTCATGAAGatataaaaccacataaatgtgaagaatgtgggaagagctttactgaTGCATATATCTTAAAGAATCATGCTTTTGTTCACGAGGATCAGAAACCACATAagtgtaaagtttgtgggaagagctttaactGGGCATCCAATTTAAAAAAGCATGTTTTGATTCATGAAGATAAGAAACCACACaactgtgaagtttgtgggaagagctttacccaggcaatttatttaaggaaacatattttgattcatgaggataaagaaccacataagtgtgaagtttgtggaaagagctttacccaggcatctaCTCTTACaaaacatctttttattcatgaGAATATAAAACCAcacaagtgtgaagtttgtgggcaGAGTTTTAACTGggcatataatttaacaaaacatcttttaattcatgatggTAAAAGGCAACATAAGTGTGAGGTTTGTCAGAAGAACTTTCGATGGGCATCTGATTTAAGAAAACATCATTTGATTCATGAGGATAATAAACCAcacaagtgtgaagtttgtgggaagagctttgcgGGAGCATCTCGTTTAAGGGAACACTTTTCGATTCATGATGGTAtaaagccacataagtgtgaagtttgtggtaagagcttcACCCGTGCATCTAATTTAAGGCAACATGTTTTGATACATGAAgatgagaaaccacataaatgtaaagtttgtgggaagagctttacagGGGCATATATCTTGAagaatcatcttttgattcatgagggcaatagtccacataagtgtgaaatttgtaaGAGGAGCTTCAACTGGGCATCTAATTTAAAAaagcatcttttgattcatgagggtaaaaaaccacataaatgtgaagtttgtgggaagaactttacccaGGCATTcaatttaaggaaacatcttttgattcatgagggtaatgaaccacataattgtgaagtttgtggaaagagctttacccggGCATCTAATCTAAcaacacatcttttgattcatgagggaaataagccacataagtgtgaagtttgtgggaagagctttaattgggcatataatttaacaaagcatcttttaattcatgaaggtaagaaaccacttaagtgtgaagtttgtgggaagaccTTTAATTGGGCATGtgatttaaggaaacatctttttattcatgaaggtaacaaaccacataaatgtgaagtttgtggaaagaccTTTACAGGAGCATCTcgtttaagggaacatcttttgatacatgatgGTAAAAAGCTACATAAGTgcgaagtttgtgggaaaagtttCATCCGGGTATCTAATTTAAGGCAACATGTGTTGATTCACGAGGATGAGAAAccccataaatgtgaaatttgtggaaagagttttacagGGACATCTCGTTTAAGGGATCATCTTTCAATTCATTATGGTAATAAGGCACATaattgtgaaatttgtggaaagagctttacctgggcatctaatttaagggaacatcttatgattcacgagggtaagaagccacataaatgtaaaatttgtatgaagAGCTTTGCTCGTGCATTTACCTTGAAGGGACATCTTTTgcttcatgagggtaagaaaccacataaatgtgaagtatgtgggGAGAGCTTTACGCATTCTTCTACCttgaagaaacatattttaattcatggggaaaaaaacatgtaa
Protein Sequence: MPEGTKPDKCEVCGKIFTLACHLQMHLLIHENNKLHECEICGKTFNQASNLRKHLYIHEGKKPHKCEVCGKSFNRAYNLTKHLLIHEGKKPHKCEICGKSFNWAYNLSKHLLIHEGKKPHKCEVCGKSFNWAYNLTKHLLIHEGKKPHKCEICGKTFTQAFNLRKHFLIHEGKKTHKCEVCDKSFTLASDLTKHFLVHEDKISSECQVCGESFTEASKLTKHLLIHEDKIPNECEVCKKRFNSASNLKKHLLVHEDIKPHKCEECGKSFTDAYILKNHAFVHEDQKPHKCKVCGKSFNWASNLKKHVLIHEDKKPHNCEVCGKSFTQAIYLRKHILIHEDKEPHKCEVCGKSFTQASTLTKHLFIHENIKPHKCEVCGQSFNWAYNLTKHLLIHDGKRQHKCEVCQKNFRWASDLRKHHLIHEDNKPHKCEVCGKSFAGASRLREHFSIHDGIKPHKCEVCGKSFTRASNLRQHVLIHEDEKPHKCKVCGKSFTGAYILKNHLLIHEGNSPHKCEICKRSFNWASNLKKHLLIHEGKKPHKCEVCGKNFTQAFNLRKHLLIHEGNEPHNCEVCGKSFTRASNLTTHLLIHEGNKPHKCEVCGKSFNWAYNLTKHLLIHEGKKPLKCEVCGKTFNWACDLRKHLFIHEGNKPHKCEVCGKTFTGASRLREHLLIHDGKKLHKCEVCGKSFIRVSNLRQHVLIHEDEKPHKCEICGKSFTGTSRLRDHLSIHYGNKAHNCEICGKSFTWASNLREHLMIHEGKKPHKCKICMKSFARAFTLKGHLLLHEGKKPHKCEVCGESFTHSSTLKKHILIHGEKNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00995936;
90% Identity: iTF_00995936;
80% Identity: iTF_00995936;