Mvio024820.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- -
- Assembly
- GCA_030762175.1
- Location
- CM060837.1:2559585-2560937[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0032 5.5 8.9 2.0 14 39 63 85 57 92 0.88 2 14 0.00094 1.6 10.6 2.4 17 39 94 113 86 125 0.82 3 14 0.047 81 5.1 0.5 18 39 123 141 120 146 0.90 4 14 0.019 32 6.5 0.5 18 39 151 169 147 179 0.82 5 14 6 1e+04 -1.6 6.6 2 39 164 197 163 207 0.71 6 14 0.018 31 6.5 1.6 19 39 208 225 203 230 0.91 7 14 0.00051 0.88 11.4 2.4 18 43 232 259 226 261 0.86 8 14 0.41 7e+02 2.1 1.8 18 39 260 278 256 284 0.87 9 14 0.13 2.2e+02 3.7 5.2 17 39 287 306 272 317 0.77 10 14 5 8.5e+03 -1.3 2.4 18 28 316 326 308 344 0.77 11 14 0.0074 13 7.7 2.5 15 39 341 362 328 369 0.82 12 14 0.042 71 5.3 1.5 14 39 368 390 363 400 0.77 13 14 3.1 5.4e+03 -0.7 6.1 6 43 389 423 384 424 0.66 14 14 0.00081 1.4 10.8 4.0 17 39 427 446 414 450 0.83
Sequence Information
- Coding Sequence
- ATGTCCAGCAATTTGGAAAATTCACCCAACACTTCTATTATTGAAGTTTCACAGAATTGCAAAGACATTGAAAACAAGCTGATATTCCCCTGTAAAGTTAATAATAGCACTTTCTCCACTTCTCCATCTATAAAAGATCATAAATCTATTCCTgagcataaaaaaaataatttaatccatGTGAGCAAGAAGCTATATAAGTGTAAAGTTTGTAgcaagagctttacccagacatctaCCTTGAggtcacatcttttgattcatgagggtagtaaaccatataaatgtgaaatttgtaacAAGAACTTTACCTGGGTATCTAACTTGAagtcacatcttttgattcatgagggtataaagccacataaatgtgaagtttgtaacAAGAGTTTTACCCAGGCATCTACATTGAagtcacatcttttgattcatgagggcttaaagccatataaatgtgaagtttgtggcaagagTTTTACCCAGGCATCTAACTTGAagggacatcttttgattcatgagggtaagaaactacataagtgtgaaatttgtgcaAAAAGCTTTACCCTCTCATGTACCTTaaaggaacatcttttgattcatgaaggtaagagaCCACATATGTGTAAAATTTGCAGGAAGAGTTTTACCCAGTTATCTACCTTGAAGAGACATCTTTTggttcatgagggcaagaagtgtgaaatttgtggaaagaactttacTCAGGCATCTACCTTGAGCAGACATCTTTTgactcatgagggtaagaaacaacataaatgtgaagtttgtagcAAGAGCTTTACACATGCATCTACCTTGAAGTcccatcttttgattcatgagggtataaagccatataaatgtaaattttgtagcAAGAGCTTTACTCAGGCATCTAACCTAAAGgggcatcttttgattcatgagggtaagaagccacataaatgtgaattttgtacCAAAAGCTTTACCTTTGCATGTACATTaaaggaacatcttttgattcacgaggGCAAGAAaccccataaatgtgaagtttgtgggaagagctttacccaggtATCTACCTTGAAGAGACATCTCTTGATTCATGAGGACAAGAAGCCATatcattgtaaattttgtaacaagAGCTTTATCCAGGCATCTAACTTGAAGGGacaccttttgattcatgagggtaagaaaccacataaatgtgaaatttgtggcaagagctttacTCTTCCATGTACCTTAAAGGAACATCTTTTGGTTCATGAACATAAGAAACCAcaaaaatgtgaagtttgtgggaagataTTTACCCGGGTAACTACTTTGAGAAGACATCTGTTAACTCATAAATAA
- Protein Sequence
- MSSNLENSPNTSIIEVSQNCKDIENKLIFPCKVNNSTFSTSPSIKDHKSIPEHKKNNLIHVSKKLYKCKVCSKSFTQTSTLRSHLLIHEGSKPYKCEICNKNFTWVSNLKSHLLIHEGIKPHKCEVCNKSFTQASTLKSHLLIHEGLKPYKCEVCGKSFTQASNLKGHLLIHEGKKLHKCEICAKSFTLSCTLKEHLLIHEGKRPHMCKICRKSFTQLSTLKRHLLVHEGKKCEICGKNFTQASTLSRHLLTHEGKKQHKCEVCSKSFTHASTLKSHLLIHEGIKPYKCKFCSKSFTQASNLKGHLLIHEGKKPHKCEFCTKSFTFACTLKEHLLIHEGKKPHKCEVCGKSFTQVSTLKRHLLIHEDKKPYHCKFCNKSFIQASNLKGHLLIHEGKKPHKCEICGKSFTLPCTLKEHLLVHEHKKPQKCEVCGKIFTRVTTLRRHLLTHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995975; iTF_00995464;
- 90% Identity
- iTF_00995975; iTF_00995464;
- 80% Identity
- iTF_00995975; iTF_00995464;