Mvio031311.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- -
- Assembly
- GCA_030762175.1
- Location
- CM060839.1:72695001-72696458[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0073 13 7.7 1.7 15 39 6 27 3 37 0.83 2 17 0.0031 5.3 8.9 1.2 18 39 37 55 29 65 0.83 3 17 0.048 83 5.1 2.1 18 39 65 83 56 93 0.84 4 17 0.67 1.1e+03 1.5 3.6 18 39 93 111 85 121 0.83 5 17 0.0023 4 9.3 1.7 18 39 121 139 112 149 0.83 6 17 0.032 56 5.7 0.6 18 38 149 166 142 176 0.88 7 17 0.054 93 5.0 0.7 6 39 166 195 165 202 0.80 8 17 0.0015 2.6 9.9 2.4 16 39 203 223 196 233 0.81 9 17 0.0058 9.9 8.1 0.6 18 39 233 251 226 261 0.84 10 17 0.052 88 5.0 3.7 6 39 250 279 245 289 0.74 11 17 0.11 2e+02 3.9 0.7 18 39 289 307 281 317 0.82 12 17 0.34 5.8e+02 2.4 5.0 18 39 317 335 308 345 0.83 13 17 0.37 6.4e+02 2.3 0.3 18 39 345 363 337 369 0.84 14 17 0.00011 0.18 13.6 2.3 15 39 370 391 361 401 0.79 15 17 1 1.8e+03 0.9 0.0 22 39 405 419 403 422 0.84 16 17 0.00069 1.2 11.0 1.3 14 39 425 447 418 457 0.80 17 17 1.4 2.4e+03 0.4 0.8 22 39 461 475 459 481 0.78
Sequence Information
- Coding Sequence
- atgcatcaaggtaagaaatcacataaatgtgaagtttgtggaaagagctttaccaaTACATTTACATTAAGAAGACATCTTTTactgcatgagggtaagaaaccacatacatgtaaagtttgtgggaagagcttttcACAGACATCTACATTAACGggacatcttttaattcatcagggtaagaagccacataaatgtgaactttgtggGAGGAGCTTTACCCAGATATCTACATTAAAGACACATCTCTTGAagcatgaaggtaagaaaccacataaatgtgaaacttGTGGGAGGAGCTTTACCCATACATTTACATTAAGAAGGCATCTTTTAaagcatgagggtaagaagccacataaatgtgaagtttgtgggaagaactttacctATACATTTACATTAAGAAGGCATCTTTTactgcatgagggtaagaaaccacataaatgtgaagtttgcggGAAGAGCTTTTCCCAGACATCTACATTAAGGGGACATTTTTTattgcatgagggtaagaagccacataaatgtgaagtttgtgggaagagctttaccctggCATCTACATTAAAGGCACATCTTTTCGTgcacgagggtaagaaaccaaataaatgtgaagtttgtgggaagtgCTTTACGCAGACATCTACATTAAGAAGACATCTTTTGgcgcatgagggtaagaaaccacataaatgtgaagtttgtgggaagagctttacctatACATCTGTATTAAaggaacatcttttgatacatgagggcaagaaaccacataaatgtgaagtttgtgggaagtgCTTTACCCAGACATCTACATTAGGAAGACATCTTTTactgcatgagggtaagaaaccacataaatgtgacgtttgtgggaagagctttgtTCATACAACTGCATTAAGGGGACATCTTTTgttgcatgagggtaagaaaccacataaatgtgaaatttgtgggaagtgCTTTACCTGGACATCTCATTTGAGGACACATCTTTTGgtacatgagggtaagaaaccacataaatgtgaagattgtgggaagagctttacccgggCATCTATattaagggaacatcttttgatacataagggtaagaaaccaaataaatgtgaagtttgtgggaagaactttacccaGACATCTACATTAAGAAGACATCTATTGATGCATGagagtaagaaaccacataaaagtgaagtttgtgggaagaactttacccGGGCTTCTGTattaagggaacatcttttgatacctgagggtaagaaaccaaataaatgtgaagtttgtgggaggagctttacccagacatctacattaagaagacatcttttgacgcatgagggtaagaaaccacataaaagtgaagtttgtgggaagaactttacccGGGCTTGTACTTTAAGGAGTCATCTTTTGATGCACAAGAGTAAGAATCCATTAATGTGA
- Protein Sequence
- MHQGKKSHKCEVCGKSFTNTFTLRRHLLLHEGKKPHTCKVCGKSFSQTSTLTGHLLIHQGKKPHKCELCGRSFTQISTLKTHLLKHEGKKPHKCETCGRSFTHTFTLRRHLLKHEGKKPHKCEVCGKNFTYTFTLRRHLLLHEGKKPHKCEVCGKSFSQTSTLRGHFLLHEGKKPHKCEVCGKSFTLASTLKAHLFVHEGKKPNKCEVCGKCFTQTSTLRRHLLAHEGKKPHKCEVCGKSFTYTSVLKEHLLIHEGKKPHKCEVCGKCFTQTSTLGRHLLLHEGKKPHKCDVCGKSFVHTTALRGHLLLHEGKKPHKCEICGKCFTWTSHLRTHLLVHEGKKPHKCEDCGKSFTRASILREHLLIHKGKKPNKCEVCGKNFTQTSTLRRHLLMHESKKPHKSEVCGKNFTRASVLREHLLIPEGKKPNKCEVCGRSFTQTSTLRRHLLTHEGKKPHKSEVCGKNFTRACTLRSHLLMHKSKNPLM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995943;
- 90% Identity
- iTF_00995943;
- 80% Identity
- iTF_00995943;