Mvio016323.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- -
- Assembly
- GCA_030762175.1
- Location
- CM060834.1:9546216-9547319[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0079 14 7.6 0.3 18 39 9 27 2 34 0.91 2 13 0.97 1.7e+03 0.9 1.0 17 28 36 47 29 58 0.81 3 13 0.022 38 6.2 2.7 6 39 54 83 49 93 0.81 4 13 0.0059 10 8.0 0.3 17 39 92 111 84 121 0.82 5 13 0.22 3.7e+02 3.0 1.3 6 33 110 135 105 139 0.71 6 13 0.043 73 5.3 4.4 16 40 147 172 136 176 0.76 7 13 0.047 81 5.1 2.5 11 39 171 195 165 205 0.75 8 13 0.0013 2.2 10.2 1.0 18 39 205 223 197 233 0.84 9 13 0.078 1.3e+02 4.4 0.4 18 39 233 251 224 258 0.86 10 13 0.077 1.3e+02 4.5 0.2 18 39 261 279 253 289 0.82 11 13 2.4 4.1e+03 -0.3 2.3 14 27 285 298 273 316 0.71 12 13 0.0016 2.8 9.8 2.0 18 39 317 335 306 345 0.83 13 13 0.00015 0.26 13.1 0.7 18 39 345 363 336 367 0.88
Sequence Information
- Coding Sequence
- atGCAAGAGGATAAGAGGCCACGTAAATGTGAAGTATGTGAGAAAGAATTTACACAGACATCttatttgaaaaaacatcttttgattcatgagggcaagaaaccatataaatgtcaAGTTTGTGAGAAGAGTTTTACCCAGGCATCTCACTTAAGGATACactttttgattcatgagggtaggaaaccacataaatgtgaagtttgtgggaaaagtttCACCCAGATATCTCATTTGAGGAATCATCTTTTTATACATGAGAGCCAgaagcctcataaatgtgaagtttgtggtaagagctttacaCAGGTATCTAATTTAAGGGAGCatgttttgattcatgagggtaagaaaccacataaatgtgaagtttgtggtaaaagTTTCACTGCTGTGTCTACTAAGcggaaacatattttaattcatgagggcaagaaaccacataaatgtgaaatttgtggaaaaagctTTACCCAGATATCTCATTTGAGAAATCATCTTTTTATACATGAGAGCCAAAAGcattataaatgtgaagtttgtgggaaaagttttACCCAAGCATCTACCTTAAAGGGACATCTCTTGACtcatgaaggaaagaagccacataaatgtgaaatttgtgggaagagttttacaaAAGTGTCTAATTTAAgagaacatattttaattcatgagggcaagaagcctcATAAATGTACAGTCTGTGGTAAGGGATTTACCCAGGCCTCTACTTTCAGAAAACATCTTTTGGCTCATGAGGGTAGGAAACCATAtaattgtgaagtttgtgggaagaactttactgTGGTATCTGatttaagaaaacatattttgatccatgagggtaagaaaccacataaatgtgaagtttgtggaaaaagctTTATTCAGGCATCTCATTTGAGGGGACATCTGTTGATCCACAAGGGCCAAAagcctcataaatgtaaaatttgtgaaaagagtTTTACCCAAGTGTCTAATTTAAAGgtacatcttttaattcatgatggCAAGAAACCTCATAAGTGTGAAATCTGTGGAAAAGAATTTACTCAGTCATCTACTTTGACAAGACATCTTTCAATTCATAAGTGA
- Protein Sequence
- MQEDKRPRKCEVCEKEFTQTSYLKKHLLIHEGKKPYKCQVCEKSFTQASHLRIHFLIHEGRKPHKCEVCGKSFTQISHLRNHLFIHESQKPHKCEVCGKSFTQVSNLREHVLIHEGKKPHKCEVCGKSFTAVSTKRKHILIHEGKKPHKCEICGKSFTQISHLRNHLFIHESQKHYKCEVCGKSFTQASTLKGHLLTHEGKKPHKCEICGKSFTKVSNLREHILIHEGKKPHKCTVCGKGFTQASTFRKHLLAHEGRKPYNCEVCGKNFTVVSDLRKHILIHEGKKPHKCEVCGKSFIQASHLRGHLLIHKGQKPHKCKICEKSFTQVSNLKVHLLIHDGKKPHKCEICGKEFTQSSTLTRHLSIHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995940;
- 90% Identity
- iTF_00995940;
- 80% Identity
- iTF_00995940;