Mvio021357.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- -
- Assembly
- GCA_030762175.1
- Location
- CM060835.1:120502438-120503661[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.13 2.2e+02 3.8 1.5 13 28 5 20 2 27 0.79 2 13 0.011 19 7.1 4.8 5 38 26 55 23 60 0.88 3 13 0.055 94 4.9 4.4 5 39 53 84 50 90 0.85 4 13 0.055 95 4.9 3.4 11 39 88 112 78 116 0.78 5 13 7.4e-06 0.013 17.3 7.4 2 39 107 140 106 150 0.86 6 13 0.015 25 6.8 0.3 18 43 150 177 142 178 0.80 7 13 0.34 5.8e+02 2.4 8.8 18 40 178 197 162 231 0.88 8 13 0.0079 14 7.6 1.7 15 39 231 252 222 259 0.82 9 13 0.031 53 5.7 0.9 17 40 261 286 253 290 0.81 10 13 0.29 4.9e+02 2.6 2.0 18 39 290 308 282 315 0.88 11 13 0.026 45 6.0 1.6 17 38 317 335 306 346 0.80 12 13 0.031 52 5.8 0.7 18 39 346 364 342 368 0.89 13 13 0.2 3.3e+02 3.2 0.2 18 29 374 385 371 399 0.80
Sequence Information
- Coding Sequence
- ATGATTAATGACGACAAAAATTCTCATAAATGTGAGATCTGTGGAAAAGGATTTAAAAAAGCAACTTATTTGAGAAACCATGCTTTCATTCATGAGgacaagaagccacataagtgtaaagtttgtggaaagaacttCACCCATGCATCTAATTTGAGGTATCATCATAaaattcatgagggcaagaaatcgcataaatgtgaagtttgtggaaaaaattTCACTCATGCATCTGATTTGAGGaagcatcttttgattcatgagggcaagaagccatttaaatgtgaagtatgtgAGAAAAACTTCTCCCAAGCATGTAATTTGAAGAACcaccttttgattcatgagggcaaaaagtcATATGAGTGTAATATTTGTGGAAAGACTTTTAATAAGACCTCTAATTTAACAAGacaccttttgattcatgaaggtactaaaccacataaatgtgaaatttgtgagaaaaaCTTTGCTCAAGCATCAGATTtgagaaaacatattttcattcatgagggcaaaaggccacataaatgtgaagtttgtgggaagagctttactaaTGCTTCTAATTTAAGAGCCCATCTTtggattcatgagggtaagaaaccacatgagtgtgaagtttgtgggaaaagttttGCACACATATGTAATTTGAGGAACCATCTTTTTATTCATGAAGGCAAGAAACCttataagtgtgaagtttgtgggaagagctttacacagCTGTCTAATTTAAGAACACATCTTTTGACTCACGAGGgcaagaaaccatataaatgtgaagtttgtgcaaAGAGCTTTACTAAGGTGTCTtctttaaggagacatcttttaattcatgagggtaagtcaccacataaatgtgaagtatgtgggaAGAGCTTCACTCAGGCTTGTAACTTGAGAAaccatcttttgattcatgatggCAAGAAACCctacaaatgtgaagtttgtgggaagggATTTGCTGGTATATCAAATTTGAGGACACACCATCTGATTCATGAAGGCAAAAGGCtccataaatgtgaaatatgtgagaGGAGCTATACTGCAGCACGTAATTTAAGGGCACATCTTTTAATACACAAGGGAATTAAGCCTTATAAATGTGAAATCTGTGGAAAGGGCTTTACCAAGTCATTTTATCTAAGGGCACATATGTTGACTCATGAGGATAAAAAgtcatataaatgtgaagtttctggaTAG
- Protein Sequence
- MINDDKNSHKCEICGKGFKKATYLRNHAFIHEDKKPHKCKVCGKNFTHASNLRYHHKIHEGKKSHKCEVCGKNFTHASDLRKHLLIHEGKKPFKCEVCEKNFSQACNLKNHLLIHEGKKSYECNICGKTFNKTSNLTRHLLIHEGTKPHKCEICEKNFAQASDLRKHIFIHEGKRPHKCEVCGKSFTNASNLRAHLWIHEGKKPHECEVCGKSFAHICNLRNHLFIHEGKKPYKCEVCGKSFTQLSNLRTHLLTHEGKKPYKCEVCAKSFTKVSSLRRHLLIHEGKSPHKCEVCGKSFTQACNLRNHLLIHDGKKPYKCEVCGKGFAGISNLRTHHLIHEGKRLHKCEICERSYTAARNLRAHLLIHKGIKPYKCEICGKGFTKSFYLRAHMLTHEDKKSYKCEVSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995947;
- 90% Identity
- iTF_00995947;
- 80% Identity
- iTF_00995947;