Mvio025155.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- -
- Assembly
- GCA_030762175.1
- Location
- CM060837.1:15029068-15030171[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00012 0.2 13.5 1.7 15 39 6 27 3 37 0.82 2 13 0.032 55 5.7 1.1 1 39 21 55 21 65 0.79 3 13 2.4 4e+03 -0.3 7.3 16 40 63 89 49 95 0.75 4 13 0.13 2.2e+02 3.8 0.6 18 39 93 111 84 121 0.80 5 13 0.056 96 4.9 1.8 18 39 121 139 113 149 0.82 6 13 0.011 19 7.1 3.6 10 39 142 167 137 177 0.75 7 13 0.12 2.1e+02 3.8 1.4 18 39 177 195 169 205 0.82 8 13 0.0033 5.7 8.8 1.9 18 39 205 223 194 233 0.80 9 13 0.0016 2.8 9.8 0.8 18 39 233 251 225 257 0.90 10 13 0.0093 16 7.4 1.2 15 39 258 279 252 290 0.80 11 13 0.63 1.1e+03 1.6 0.5 19 39 290 307 282 317 0.80 12 13 0.016 27 6.7 2.1 17 39 316 335 303 345 0.80 13 13 0.0068 12 7.8 1.1 18 39 345 363 336 367 0.89
Sequence Information
- Coding Sequence
- ATGCGTCAGGgtaagaaatcacataaatgtgaaatatgtgggaAGACTTTTACCCGGGCATCTAatttaaaagaacatattttgattcatgaaggtaagaaaccacataagtgtgaagtttgcgGACAGAGCTTTACCTGGGCATctaatttaagggaacatctattgattcatgagggtaagaaaccgcataaatgtgaagtttgtgaaaaaaGTTTTACCCAAATATCCCATTTAAGGACTCACCTTTTTAACCATGAGATTCAAAAGCCTCATAAATGTAAAGattgtgggaagagctttgctcaggcatctaatttaaggatacatattttaattcatgagggtaagaagccacataaatgtgaagtttgtgggaaaagttttACCCAAGTATCTCATTTAAGGACTCATCTTTCTATACATGAGAAGCAgaagcctcataaatgtgaaatttgtgggaaaaggTTTACCAGAGCATCCACCTTAAGgatacatcttttgattcatgagggtaagaaaccacataaatgtgaactttgtggAAATAGCTTTACCCAAGTATctcatttaagggaacatcttttgattcatgagggtaagaagccacataaatgtgaaatttgtggaaagaccTTTACCCAAGCATCAACcttaagggaacatcttttgattcatgaaggtaagaagccacataaatgtgaagtttgtgggaaaagctttacaaAGGTGTCTAATTTAAAGAAGCATCTTTTAGTTCATGAGGACAAAGAtctatataaatgtgaaatttgtgggaagggCTTTACCCAGGAAAGTACTTTAAGAacgcatcttttgattcatgaggggaAGAAGCCACATATGTGTGAAgtatgtgggaagagctttaccctaGCATCAACCTTGAAGGGACATCtcttgattcatgaaggaaaaaagccacataaatgtcAAGTTTGTGGGAAAGGCTTTACCCAATCATCTAATTTAAAGAtccatcttttaattcatgaaggtaaaaaaccacataaatgtgaagtttgtgagaaaagCTTTACTGTAATATCTAACTTAAGGAAACATCTATTGATTCATAAGTGA
- Protein Sequence
- MRQGKKSHKCEICGKTFTRASNLKEHILIHEGKKPHKCEVCGQSFTWASNLREHLLIHEGKKPHKCEVCEKSFTQISHLRTHLFNHEIQKPHKCKDCGKSFAQASNLRIHILIHEGKKPHKCEVCGKSFTQVSHLRTHLSIHEKQKPHKCEICGKRFTRASTLRIHLLIHEGKKPHKCELCGNSFTQVSHLREHLLIHEGKKPHKCEICGKTFTQASTLREHLLIHEGKKPHKCEVCGKSFTKVSNLKKHLLVHEDKDLYKCEICGKGFTQESTLRTHLLIHEGKKPHMCEVCGKSFTLASTLKGHLLIHEGKKPHKCQVCGKGFTQSSNLKIHLLIHEGKKPHKCEVCEKSFTVISNLRKHLLIHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995941;
- 90% Identity
- iTF_00995941;
- 80% Identity
- iTF_00995941;