Mvio027648.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- -
- Assembly
- GCA_030762175.1
- Location
- CM060838.1:19625186-19626670[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.017 28 6.6 4.7 8 39 14 41 7 45 0.78 2 16 0.00066 1.1 11.1 1.5 12 39 45 69 42 79 0.86 3 16 2.5 4.3e+03 -0.4 0.3 18 29 79 90 73 93 0.85 4 16 0.00098 1.7 10.5 5.3 3 39 93 125 91 129 0.91 5 16 0.00024 0.4 12.5 4.6 1 39 119 153 119 163 0.86 6 16 0.062 1.1e+02 4.8 1.1 18 40 163 182 151 191 0.86 7 16 0.42 7.2e+02 2.1 2.7 17 33 190 207 183 219 0.74 8 16 1.5 2.5e+03 0.4 7.2 17 39 246 265 207 275 0.86 9 16 0.12 2.1e+02 3.8 2.1 18 39 275 293 266 303 0.85 10 16 0.05 85 5.1 5.6 16 39 301 321 291 332 0.77 11 16 0.32 5.5e+02 2.5 0.3 18 41 331 351 326 353 0.84 12 16 0.0017 2.9 9.8 4.4 12 39 353 377 347 387 0.79 13 16 1.3 2.2e+03 0.6 1.0 18 29 387 398 376 408 0.77 14 16 0.0053 9.1 8.2 1.1 18 39 415 433 404 443 0.81 15 16 0.013 22 7.0 0.9 18 39 443 461 436 468 0.90 16 16 0.00098 1.7 10.5 0.6 17 39 470 489 462 493 0.86
Sequence Information
- Coding Sequence
- atgGGCTTTACCTGGCCATCTAATTTAAGgagtcatcttttgatacataagtataagaaaccatataaatgtgaaatttgtgagaagagctttactcagacatcTAGTTTAAGgaatcatcttttgatacataaggatgagaaaccacataaatgtgaagtttgtggaaaaagctTTACCCGGAAATCTAGGTTAATTAATCACCTTTTGATTCataagggtaagaaaccacaaaaatgtgaagtttgtggggaGAGCATTACTCAGAAATGTAGTTTATGGAATCATCTTTTGATACACAAGGATGAGAaactacataaatgtgaagtttgtgggaagagctttactcacaGATCTAGTTTATGGAATCATCTTTTGACACATAAGGATgataaaccacataaatgtaaagtttgtggaaagagctttactcgGAAATATAGGTTACGTAatcatcttttgatgcatgagggtaagaaaccacataaatgtgaagtttgtgagaagagctttacctgGTCATCTAGTTTAAGGAATCATCTTGTGATACATAAGGATGAGgaaccacataaatgtgaggtttgtggaaagagctttactcagaAATGTAGTTTAAGcaatcatcttttgattcatgagggtaagaaaccacataaatgtgaagtttgtggaaagagctttactctgaaaatttatttaaagattcaTCTTTCagttcatgagggtaagaaaccatataaatgtgaagtttgtgggaggAGCTTTACTCAGACATCTAGTTTAAAgaatcatcttttgatacatgagggtaagaaaccacataaatgtgaagtttgcgagaagagctttactcagaaaTCCAGTTTAAGGaagcatcttttgattcatgattATAAGAAACCatgtaaatgtgaagtttgtggaaagagctttactgGGAAATCTGGATTAAGCAatcatcttttgatgcatgagggtaagaaaccacataaatgtgaagtttgtgagaagagctttacctgGCCATCTAGTTTAAGGACTCATCTTGTGACACATAAGGatgagaaaaaacataaatgtgagatttgtggaaagagctttactcagaAATCTAGTTTAAGcaatcatcttttgattcatgagggtaagaaaccacataaatgtgaagtttgtggaaagagctttactctgaaaatttatttaaagattcatcttttgattcatgagggtaagaaaccacataaatgtgaagtttgtgggaagagctttactcagacatcTAGTTTAAGgaatcatcttttgatacatgagggtaagaaaccacataaatgtgaagtttgcgagaagagctttactcagacatcCAGTTTAAGGaagcatcttttgattcatgaatataagaaaccatataaatgtgaagtttgtggaaagagctttactcgGAAATCTGGGTTAAGTAGTCATCTTTTAATACATAAAGAttag
- Protein Sequence
- MGFTWPSNLRSHLLIHKYKKPYKCEICEKSFTQTSSLRNHLLIHKDEKPHKCEVCGKSFTRKSRLINHLLIHKGKKPQKCEVCGESITQKCSLWNHLLIHKDEKLHKCEVCGKSFTHRSSLWNHLLTHKDDKPHKCKVCGKSFTRKYRLRNHLLMHEGKKPHKCEVCEKSFTWSSSLRNHLVIHKDEEPHKCEVCGKSFTQKCSLSNHLLIHEGKKPHKCEVCGKSFTLKIYLKIHLSVHEGKKPYKCEVCGRSFTQTSSLKNHLLIHEGKKPHKCEVCEKSFTQKSSLRKHLLIHDYKKPCKCEVCGKSFTGKSGLSNHLLMHEGKKPHKCEVCEKSFTWPSSLRTHLVTHKDEKKHKCEICGKSFTQKSSLSNHLLIHEGKKPHKCEVCGKSFTLKIYLKIHLLIHEGKKPHKCEVCGKSFTQTSSLRNHLLIHEGKKPHKCEVCEKSFTQTSSLRKHLLIHEYKKPYKCEVCGKSFTRKSGLSSHLLIHKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995979; iTF_00995422;
- 90% Identity
- iTF_00995979; iTF_00995422;
- 80% Identity
- iTF_00995979; iTF_00995422;