Mvio002826.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- -
- Assembly
- GCA_030762175.1
- Location
- CM060830.1:94485484-94491927[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0042 7.3 8.5 0.2 13 44 83 116 75 116 0.88 2 12 0.014 24 6.9 7.8 13 39 111 134 102 144 0.81 3 12 0.045 76 5.2 0.3 18 39 144 162 136 171 0.90 4 12 0.05 86 5.1 0.5 18 39 200 218 189 228 0.82 5 12 0.043 74 5.3 1.8 18 38 228 245 224 256 0.83 6 12 0.0046 7.9 8.4 0.4 18 39 256 274 247 284 0.85 7 12 0.064 1.1e+02 4.7 1.2 18 39 284 302 276 305 0.86 8 12 0.0058 10 8.1 2.9 9 39 304 330 300 336 0.78 9 12 0.0029 5 9.0 2.3 4 39 327 358 324 368 0.79 10 12 0.0058 9.9 8.1 0.6 18 39 368 386 360 396 0.82 11 12 0.029 49 5.8 1.9 18 39 396 414 387 424 0.80 12 12 0.00037 0.63 11.9 0.7 15 39 421 442 415 444 0.88
Sequence Information
- Coding Sequence
- ATGATAGGATATGTAGATACGAATCCCCTTAATAAGCCTTGTAATCACCTTGTTGTCAATGCTGCAGCATGGAAATATGCATGGGAAGAGAAAGAAGTTGACATAGCATTAATCAAGGAGGAGATTATAGTTGGGGAACTAGATGTTTCATACAGTAGTCCAAGGTCACATGTAGAAGATCTCTCCAGTAATTTCAGCAATTCATCTGCTTCTTTTGTTGATGTACTAGAAAGCAAAGGCAATGTAAAAGAGCAGATATTTACTTGTATACCTTGTGGCAGTGCTTTCACCAATTCTTCATCTTTTAAAGAGcatatattaaaacaagaatGTGTAAGAAAACATAAGTGCAAGATTTGTGGAAAATGCTTTACTCGAGCATCAAACTTAAGATACCATATTTTGATTCATAAAGGCAAGGAGCCACATACGTGTGAtatttgtgggaaaagctttatcCAGCCATCTAATTTGAGATACCATCTATTAATACATGAGGGCAAGAAGCTACAACAAGTTGCAGTTTGTGGAAAAGACTTAACTGGAGCATCACAACCTCAGGAACATCTTTCAAATCATGAGGTAAAGAAGCCCCATAGCTGTAAATTTTGTGGAAGTAGCTTTTCTCAGGCAGCTACTTTGAGGaggcatcttttgattcatgagggcaagaagcctcACAAGTGTGAATATTGTGGAAGGAGCTTTACTCAGGCATCTACTCTGCGAAGACAtcatttgattcatgagggcaaaaagccaCACAAATGTGATGTCTGTGGGAAAAGCTTTTCCCAGGCATCAAATTTGaggaaacatattttgattcatgaaggtacaaagccacataagtgtgaattTTGTGAGAAAAGGTTTACTCAGGCATCTCAtttgaggaaacatcttttgactCATGAGGACAACAAgccaaataaatgcaaaatttgtgggaagagctttactgaAGAATCTCAAATgaaggaacatcttttgattcatgagcgCAAGAAGCTATAtaattgtgaagtttgtggaaagaactttacTCAGGCATCTAATTTGAAcagtcatcttttgattcatgagggcaagaagccacataaatgtgaattttgtgggagGAGCTTTACGCAGGCATCTACtctaaggagacatcttttgattcatgagggcaagaagccacataaatgtaaagtttgtgctAAGAGCTTTACTCGGGCATCTAATTTGAGcattcatcttttgattcatgaaggaaagaagtCTCATGTCTGTGAAtattgtgggaagagctttacccaggcatctaCTTTGAGGAGACATCTCTTAATTCATTAG
- Protein Sequence
- MIGYVDTNPLNKPCNHLVVNAAAWKYAWEEKEVDIALIKEEIIVGELDVSYSSPRSHVEDLSSNFSNSSASFVDVLESKGNVKEQIFTCIPCGSAFTNSSSFKEHILKQECVRKHKCKICGKCFTRASNLRYHILIHKGKEPHTCDICGKSFIQPSNLRYHLLIHEGKKLQQVAVCGKDLTGASQPQEHLSNHEVKKPHSCKFCGSSFSQAATLRRHLLIHEGKKPHKCEYCGRSFTQASTLRRHHLIHEGKKPHKCDVCGKSFSQASNLRKHILIHEGTKPHKCEFCEKRFTQASHLRKHLLTHEDNKPNKCKICGKSFTEESQMKEHLLIHERKKLYNCEVCGKNFTQASNLNSHLLIHEGKKPHKCEFCGRSFTQASTLRRHLLIHEGKKPHKCKVCAKSFTRASNLSIHLLIHEGKKSHVCEYCGKSFTQASTLRRHLLIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995972; iTF_00995471;
- 90% Identity
- iTF_00995972; iTF_00995471;
- 80% Identity
- iTF_00995972; iTF_00995471;