Mfus003355.1
Basic Information
- Insect
- Mesopsocus fuscifrons
- Gene Symbol
- MBD2_1
- Assembly
- GCA_950004255.1
- Location
- OX465374.1:8508505-8516878[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.3e-16 2.9e-12 46.1 0.1 5 71 1430 1494 1426 1500 0.91 2 3 8e-20 3.6e-16 58.6 0.0 11 72 1551 1610 1545 1614 0.93 3 3 1e-15 4.8e-12 45.4 0.1 9 70 1643 1702 1638 1706 0.96
Sequence Information
- Coding Sequence
- ATGGACAACGACGGCGCGGAGCAAGGTGCATCGGTTTGTCGCCGGCAGTCCGAGTTGGACTTCACGCCCTCCGTTGCGCTGCAAGGCCGCAACGTCATGTGCACCTCCACCATGATCAAGGTCACCTACAATAAACCCGTTAGCGAATCGCCAAGCCGCTGTGTGGAGAGGTTAGCTGCTGCATTTTGCCCCAGAGGCGCTACAAGTGTGATCCCATTGCCCCAGCAACCCGCACATAGCGTGGAAAGGGCTCCTCCCCCCAACAAACCCATTGCCATTCTTGTGTCCAGGGAGACTCCTTGTAAGGCCCTTCCGCAGGCACGGCCAGTTCATTACTATCCTTTCATGCTTACCGGGTCTCAGTCACTGAGCCAACATAACATTTCTTCAAACAAGGAAAATGTTGAAAGTGATGGTGGGGAACAGTTGGAAAATTTGGAGAATGATGGTAGGAAGCAGAAAGGGAAAGCTAAACGTGGCCATAAGAAGCAGTGGATTGAGGATAATGAAGCGATTGAAAAATATCGTAAGAAGAGGGGGCGCAGGTCCCGGAGAGGCGAAGCCTTGCCGCCCGAAGAAAGCATTATTGTACAGAAAGAATCCGCACGTAGATATGGGCGGAAGAGAAAAAGTAAGTCTGAAATCATTTTGGATGAGGCGATAGGGATTACGGAAGACAAATCAAAACGGAAGGTCCGATTGCTGCCGAAAGAGCttcctgaaattgaaacaaAGTCTAAACGAAAAACCGCTGTTGAGCTTGCTGTATCCGATTTAAAGCGCGTTCAGAAGAAACGCAAGACTACAATGAAAGATTCAACCGGAAAAGCGCATGATAGCTTCGCCTTTATTCCTCGAAGATCAGGGAGGATGAGGACTGCCATTAGATTTCATGATCTGGAGAGTGAAGCTGAAGATGCATATGAATGTAATGCCAAAGTTCCGTCTCGTGCAGCGTTATCAGAAACTAGGCGTAAATCAGTCCAGTCCCCTTGGCAAGGTGTACTGGCGAAAGCTGTTGATATATGTGAAAGGCTGCATAAAGAGTCGCTCGATGAGGAAGAGACAGCCGGTGTCGTTACTCGAAAGTCAAAACGTGGGAAGAAACGATCACGGACCGAAGATGAAGTGACACCAGTCGCACGCGAGAAGAGTACTGAATATGACTCAGAAAAATCAAAGGAGCGTGGGCGACGCAGCAGACGCCATCGACGTCACCATCACAAAGATAAAACTCTCATTCCCGAAGAAGGAGTAGTTGACTTTTGTGAACGCCcacgaaaaagaaagaaaaggcaTGAGGAATCACCTGGCCCTCCTGTTGCTGAAGGTACAAGCACACGTTTTCAAGCCAAGTCAGATTCACCAGTTGATGTCCAGCCCATGGCCTTCAACACAGAAACTCCTGAATCTCTTTCTGCAAAAGGGCGTAAAAAACGTGTACTCCGGTCTAAGGACCGTAAAGAACAGATAGTTGAAGAATCTAATGCCGGTGTCGATTCCGTTAGAACAAGTCGGCGACTCCGTGCTGccaaaaatcccaaaaacTCTGTTGACGAACCAAGCCCAAAAAGACGAGGGCGGCCGCCGAAATTGGTGAAGGAGGTAGACTCCAGGAATGTTGATGACCATAGCGTCCCTGTGGATCCTTTACTTGAAGCTTTGGCTCAGTATCTCAGCCGAGATAGTCCTATAACGCGGGGAAAGTCTAAAAGTCTCTCGAAGAATATGCAGCAATTACCTCCGGACTTGGGTCCCCCTCAAAATATTCCAGTTGGCGAAGAATATCGGAAAAAACACGACCAgtctgaaaatatttctggaAAGAAGGTACGGGCAAGGCGAGGTGAGGCTTTGAAAGAGCAGTCAACGTCTGTGGGCGACTCACCTTTACATAGCAGCCAGTTAAGCAGGAGATGGGAGGAAAAGGAGCTGGCTCCTGTAAAAGACGTAGTTAACCAATTGGATGTGTGTGAAGAAAACTCGATGGACGACCCCCTGGTTGCACAGATGGCTCAGCTAGAAAGGGAGTCTGTCATTAAACCTAATTTTGACGTAATAGTCCCTGTGCAAAGTATGACCTCTGGGTTATGTTTGCCGATCAATGCTACATTGTCAGAATCTGTAACAGCCAGGACATCTCAGACAGCGGGATCAGAAGCACCTCAGCCTTTGGTTTCTGCCATTTGTCCATCTTTGAATGCTGAGTTACCTCAGCAAAAGGTAACAGAGATAACTTTACCGTTGACTTCTGAGCGGCTTCCCCCCACATCTCAGACTGTTGGTGCCGAACCAAAACCagatgaaaattttccaacagGTACTGTAAGTGTTAAATTTGTGCCAGAAACAGTGGGAGCTAAAGAATTACCAGTTGGGACGAATTTGGAATTACAAGCATTAAATAACGAGCAATATTTGTCTCTGGATAATATGCCTCATGTTAGAGAGCAAACTCCAGATGTTGTGGCTTTAGATCCATTGGAAAAGTCCACACCGCCCAAGAAAAGAGGGAGGAGGAAACTACTTTCGATTCCTTACCAAAGAATCATTGAAAAGACTGAAATTCATATTCCTGCGGAAGTAGTGAAAGATTTTGGTATCCCCCCGGCACTTGATACACACGTTGCTGGGAATACTGAGCCGGTGTGTGTCGAACCACCCACATACGCCGTTGTGAAGGAAATAGCTGAGCCTATGGGAATTATGAATAGTCGAGGGTTGGGCCTGAgagaaaaggggaaaaatttCAGGCTTGTTGACAATAGAGAAAATTCAGAAGTAAACTCAGAAGACTTAGGGGTGGATACTGTCGTAATGGATTTTAACACTGTCATGTTCGATCCCGTCATGGTGGTGGCGGGTGAAGAAGTTGTTGAAGCACCGCCCGTAATAGATCTCACTGTCACTGAGAAACCTTTGGATTCTGTGACGGAGGAGCAGGTTATAGTTCAAAATCCAGACGTGTTAGGAGATCCTGAAAACACTCAAGATGAAAAGGCGGAAGTGTGTGAAATTGGAGGTGGCATCCGTgaagttgaaaaatttctagGTGAAGGTATTGAAGTGGGTGAAATTCGAGAAGTTGAAGGGGTTCGAGTTGAGGATCTTGAAGTGGGTGCAATTCGAGAAGTTGAAGTTCGGGGTGAAGATCAACAAGATATTTTGGAAGCACATTACAGCAATCTTCCTCCAGAAATTATTGATGAAAATGGACTGAGTGGAAAGAAACCaaagaaggagaagaaaaagaagaaaaaacaaaaaaaacataagCGAGCAAAGTCCACTGAACCCGAGAAATTTGAATGGGCCCCACTCAAAGTGAAAAATGGAAGTACATACATTGGTATGAAGGATAGACGTCAGTTGGTTGTCTCACTGGAGAAGCTGGATCCACCCAAGTTGGACTGCGAAAAACCGCAAGTGCTGGACAAATCGGACAGCGGTCGCAGGAAGTCGCCAAAGAAGTACAATCAACTTCGGAAAAAGCCCAAACCAGCGCTGGAGAGAGAGAATTGCATGTCTGGAGATGAAAAGGAGAAGCCAAAAATAGTAGTTCAGGAAGAGAAGTTAAAAGACAAGTCTGAAAAAGAGAAATTAACGACGAATGTGCAAGACGAGCTGGAGAAGTTGGCTTCGATGACCCTAACAATGAAAGAAAACCATTCTAGGGTGAAAATACGCTCCTCTCGTCATTGTAATGAACAAAAAGTTGTGGCCACCAAATCTTCCGGACCGTCGCACACTCAGAAACGTTCAAAACGATTGGAACATCCCAGTGACACTCTTGTAAAGAAGAAATACGCTCAAGGTGAAAAACCTTCTGTTGAAAAAAAGCACAGACATAAGACGCCTGAAAAAGAGGCTCCGAAACAGGTAATTCAAGAGGCTGAGCCTCCCGTGGATGTAAGTCCTATCGGAACTTCGGTGGTTGCCGACCGACCTAAGTCTATCGATGAAAAGCCACGTACACCCAAGTCTGAACAACCAAACAACAGCCTTCCTGTATTAAGGCCCAAAACTCCTAAACCAGAGCCCTTCGGACTGAAATCGCCTCGTGATAGGTCTGTGGTAGCAGCTTCAGCCACGCCGCAGTTGGCAAAAGACAGTAAAGGCGTGCGCATTGTACAGTGTGTAGATATGTTTAGTGGTCTGACGAAGCCGCAGGTGCGCAAAGAGCGGAAGGAGGCGAAGGCGGTAGCGAAGAGGCCGCACGTCGTGGTGCCCTCGCTGTTCGCCCCGGACCCGCCCGCGCCAGCGACTCGCCCTTCTCGCCCTAGTAACGAGGTGGCGggccccccactccccccTGGCTGGACCAGGCTAGTTCACACGCGGTGCAGTGGTGCTACCAAGGGAAAGCGGTCCATTGTCCTCTTAAGTCCTAATGGAAAACGATTTGATCGTAAATCTGAGCTGGAAAAATACCTCAAGAAACAGCGCCTTCCATACGAAGAAAATCAATTTAGTTTTAGTGTTAATTTTTCATCTCCCAAAACGTCGGTCAAATTTAAGAGTAAAAAGTCCATAACGACGAGCAAGAATGTAAGCAAAAATATGAAGACGAAGAAACAGCTAAGAAATAAGTTGGCAAGTGTTGGAGTTACGGCAGCTATGAGTTCGGAACAACTTAAAGCGGTTTGTGAGCTTCCTGGAGGATGGAAACGAGTGACACGCGTGCGCATCAACGGTCGATCAGCTGGGAGATCAGACACCCTATACTACTCACCCGAAGGACGGCGGCTGCGTAGTCGACCTGAGTTGGCAAAGTACCTACAGGACACAGGCTCCTCCCTGAAAGTGGAGGATTTCTTTACGGAAGATCCGTCTTCTGTCCGTCTTTCCAAACCGGTGCGTCAAGAGGCGACTGGTCCCTGCTCGACGGAGAACGCGGACCCTCatCCGGAAATACTGAGCGAAGGCCCAAGGCTTCCCGTTGGATGGAAAAGGGAGATACATGTGCGCAAAGGTGGGGATAGCCATGGCCGTGTCGAAGTGTACATGATAAGTCCTGACGGGAGGAAACTGTCCAGTAGAAAAAAGCTCCAGCGATACTTCCAACTCCGCAACCTTCCTTATAACCCTGAAGATTTCGACTTTTCACATTCTGGTAGAGGTAAAATAGAACGGGATACTCGGAGTGAAAATATTCCGAAACCAGCCGTCCCACCCCGTTCGCCGGTTAAAACGTCCATAAAAAAGATGGAGAAATTGAAACCTTCGTCTgagaaaattaagaaaaagagTGAGGGGAAGTCAGTTGAAAGCAGGAATGAAGAGAGGGAGGTTTTGAAGAGTGATGCGGAGATAAAGTCACGAGTGTTGACAAGAGATGAGCTGGTGGAGCTATATCGGAGAGTGCGCGATGACGCTGAGCTAGGTGTGGAGCTGACTCCTTGTGCTGATGGCTGCGTATCATCACCCCCTGACCTGTCCCTACCAGATCGCGTTCGAGCGATCGTGGTTGCGACCGGTTTGTCCTCTGCGCGGACTGAGCGGCGGCTTGCTGTCCTGCATGCGAGCGCTATGTGCAGCGTGCGATTCAGTGATGACCTCAGTGTGGAAACCACGATAGGAGTCCCTCCTCGATGGGTGCACAGCCTACTTCGCTGCCGGCCGGAACTGGCGGGTTTCGATGACTCTGCGATTGAGAGCGTTGCTGCAGCCACCGAGTACTTCATCCAGCGACTGGCGAGCCATGCGCACCGCCTGGGTGGGGAGGGCTCTCTGGAGTACCGTCATGTTGCGGAGCTAGTGGCCGACACGCCCAGCCTGGCGCCGCTAAGACCTCTCATCCCGCGCCGCGTCACTGCCACCCACTTTCGCCGACTTGCGCGCCCCTCCAGGTTCTTCTCTTTTACGGCGTAA
- Protein Sequence
- MDNDGAEQGASVCRRQSELDFTPSVALQGRNVMCTSTMIKVTYNKPVSESPSRCVERLAAAFCPRGATSVIPLPQQPAHSVERAPPPNKPIAILVSRETPCKALPQARPVHYYPFMLTGSQSLSQHNISSNKENVESDGGEQLENLENDGRKQKGKAKRGHKKQWIEDNEAIEKYRKKRGRRSRRGEALPPEESIIVQKESARRYGRKRKSKSEIILDEAIGITEDKSKRKVRLLPKELPEIETKSKRKTAVELAVSDLKRVQKKRKTTMKDSTGKAHDSFAFIPRRSGRMRTAIRFHDLESEAEDAYECNAKVPSRAALSETRRKSVQSPWQGVLAKAVDICERLHKESLDEEETAGVVTRKSKRGKKRSRTEDEVTPVAREKSTEYDSEKSKERGRRSRRHRRHHHKDKTLIPEEGVVDFCERPRKRKKRHEESPGPPVAEGTSTRFQAKSDSPVDVQPMAFNTETPESLSAKGRKKRVLRSKDRKEQIVEESNAGVDSVRTSRRLRAAKNPKNSVDEPSPKRRGRPPKLVKEVDSRNVDDHSVPVDPLLEALAQYLSRDSPITRGKSKSLSKNMQQLPPDLGPPQNIPVGEEYRKKHDQSENISGKKVRARRGEALKEQSTSVGDSPLHSSQLSRRWEEKELAPVKDVVNQLDVCEENSMDDPLVAQMAQLERESVIKPNFDVIVPVQSMTSGLCLPINATLSESVTARTSQTAGSEAPQPLVSAICPSLNAELPQQKVTEITLPLTSERLPPTSQTVGAEPKPDENFPTGTVSVKFVPETVGAKELPVGTNLELQALNNEQYLSLDNMPHVREQTPDVVALDPLEKSTPPKKRGRRKLLSIPYQRIIEKTEIHIPAEVVKDFGIPPALDTHVAGNTEPVCVEPPTYAVVKEIAEPMGIMNSRGLGLREKGKNFRLVDNRENSEVNSEDLGVDTVVMDFNTVMFDPVMVVAGEEVVEAPPVIDLTVTEKPLDSVTEEQVIVQNPDVLGDPENTQDEKAEVCEIGGGIREVEKFLGEGIEVGEIREVEGVRVEDLEVGAIREVEVRGEDQQDILEAHYSNLPPEIIDENGLSGKKPKKEKKKKKKQKKHKRAKSTEPEKFEWAPLKVKNGSTYIGMKDRRQLVVSLEKLDPPKLDCEKPQVLDKSDSGRRKSPKKYNQLRKKPKPALERENCMSGDEKEKPKIVVQEEKLKDKSEKEKLTTNVQDELEKLASMTLTMKENHSRVKIRSSRHCNEQKVVATKSSGPSHTQKRSKRLEHPSDTLVKKKYAQGEKPSVEKKHRHKTPEKEAPKQVIQEAEPPVDVSPIGTSVVADRPKSIDEKPRTPKSEQPNNSLPVLRPKTPKPEPFGLKSPRDRSVVAASATPQLAKDSKGVRIVQCVDMFSGLTKPQVRKERKEAKAVAKRPHVVVPSLFAPDPPAPATRPSRPSNEVAGPPLPPGWTRLVHTRCSGATKGKRSIVLLSPNGKRFDRKSELEKYLKKQRLPYEENQFSFSVNFSSPKTSVKFKSKKSITTSKNVSKNMKTKKQLRNKLASVGVTAAMSSEQLKAVCELPGGWKRVTRVRINGRSAGRSDTLYYSPEGRRLRSRPELAKYLQDTGSSLKVEDFFTEDPSSVRLSKPVRQEATGPCSTENADPHPEILSEGPRLPVGWKREIHVRKGGDSHGRVEVYMISPDGRKLSSRKKLQRYFQLRNLPYNPEDFDFSHSGRGKIERDTRSENIPKPAVPPRSPVKTSIKKMEKLKPSSEKIKKKSEGKSVESRNEEREVLKSDAEIKSRVLTRDELVELYRRVRDDAELGVELTPCADGCVSSPPDLSLPDRVRAIVVATGLSSARTERRLAVLHASAMCSVRFSDDLSVETTIGVPPRWVHSLLRCRPELAGFDDSAIESVAAATEYFIQRLASHAHRLGGEGSLEYRHVAELVADTPSLAPLRPLIPRRVTATHFRRLARPSRFFSFTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -