Mfus013832.1
Basic Information
- Insect
- Mesopsocus fuscifrons
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_950004255.1
- Location
- OX465379.1:12489233-12494710[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.84 1.5e+04 -5.1 1.9 253 278 50 76 41 88 0.44 2 6 0.066 1.2e+03 -1.5 0.2 68 101 150 184 92 185 0.77 3 6 1 1.8e+04 -5.5 10.3 27 83 381 434 372 459 0.49 4 6 1 1.8e+04 -23.3 27.0 21 85 488 552 485 659 0.68 5 6 2.2e-98 4e-94 315.3 24.0 1 300 722 1009 722 1009 0.91 6 6 0.17 3e+03 -2.8 4.7 210 252 1028 1069 1010 1083 0.56
Sequence Information
- Coding Sequence
- ATGTATTTATTAAAGAAAATCGTCAGCTTTGGAAGTGGACGGATATCCAATGATACTAGTGGGGAGGAAGATCATTCTAGACCAGAAACTCCGACTGAAGGTCCCGTTGATGATGACGACAAAGAATATTTGGGGCGTCAGAGCAAGAAAAAGCGGGGGCGCAGCAAAAAGAGAAAGAAGTCGGAAAAAGTAGAAGAAAAACAATTGAGTGTTGTTAAAAAAGATGATGATGAAAATAGTGATGTGAAGGACCCGGAAGAGGAGCCAGTGCCTCGCCATGAGATCCCGGACATATTTTTCGAAGAACTCTCTGAAACAGACAAGTCCAGAGAAGGGAACAGTACGAGCCAGGATGTTTCTTCGTCCGATCTGAGTGAGTGTCTCCCACCGGAGCGCCCCGGCCAAGACGTTGACATATGGGCAGACAGAGCCGATGATGATTTTGTGGTACGAAAGAAGTCAGTAGATGATACCGAAAATGTTGCCGAAGAGCCGGTCAACTTTGATGACTTCTGGGCTGAATTTGATGAGGTTGAGGGCAGGCCGCGAAAATCAAGTAAACCTGAAGAAGCTATCAGTTTGGTACCTAGCGATGCCCATAACTCAGAAGGTAGGCAAATTGAAGCCGTTGAAGATTTTTGGGGTCATAGTGAGGGCACCACTCGACCTGAGTCAGGTGTCCCTGATGGTCCTGTAGAAGGCAAAGAGGAAGCAGAGGACATCAGTGATGCTGCGGCCGATCGGGAGGACAGGAAAGTCACAGAAACGAAACAGATAACTGAAAAGATAGAAGAAATCGACATCTGGGCGGATCGAGAAGATGACCTGCCTCCTGTCCTTGAGAAGGTCCTTGATGTTCGGAAATTCTCAGGTGTGAAAGAAGAAACCGATATCTGGGCGGATCGAGAAGATGACTTACCTCCTGTCGTTGAGAAAGGCCTTGCTGTTCGGAAATTCTCAGATGGGAAAGAAGAACCCGATATCTGGTCGGATCGAGAAGATGACCTGCCTCCTGTTCTTGAGAAAGCCCTTGACGTTAAGAAATCCTCAGATGTGAAAGAAGAACCCGACCTCTGGGCGAATGGAAGTGATGTTGCGGGGCTGCTCGATAAAGGGCCGTCAGAAGTAATAGAAATATCTGAAAGGGAGagtgaagagaaaaataatgaagacAAAGACACTACCAGTGACGCATCAGAACGAGAAAAAGAACAGGGAAAGGGTGACGTTGAGAGAACAAGAAGGCGAAGCGAAACAAGGGATCGTTCAGATGATACTACTGGAGGAAGTAGTCGGGACGAATCTGGAAGTGATGGAATGGATCGTTCTCGGTCAATTCTGCacgaagaagaagattttAAATCAACTTATTCACAAGAGGGCAGGAGAGATGATGAAAGTGAAGCCGTGGAAAGCTTTTGGGGCGACGCCGAAGGTGAAGTCCCTCCGGTGTTTCATTTGAAGGCTCTTGAAAAGAGTAAATCGGAAGAGCTAGCAGGGGAAGCGGAGGAAGAGGCCAGGACAGAAGAAAGTGGAAACGAAGAACATCAACCAAAGAAGaatgaaacagaaaatttaaataacgaATCGAAGGATGAGAAGTCAGGAGAAGACAGTAACGAAGTATCAGACTCTGCTTCGACGGAAACAAGTTCTCCTGAGGAATCTCAGGTTAAGGAATTTATAACGGCGGCTTTGAGGGCTGAAGAAACCATTGCGGAAACTGATGGCTCCGAAAAGTCAAAGACAAACCTTACTGAAGAAGTACACAGCAATACAGAGGAGACTGAAGATGAAACTTCGACAGAGACTGATAGTCCGGAAAAATCCCTGACTGACAAGCAGGCTGAAGAATCCTCCACAACCCCCGAGAAGGATGACAGCAAAGAAGGAAAGGAGGCTTCCCCGGCACCTGAGAGGGAACCCGAGAAAGAAGTGAAGGAGGCTCATCGACGCAGCTTTGCAAAGGCTCTGCAGGAGATCGAGGCCCCGACTCGGAAGAGGTCTGTCTTGCTTCCGGACAGCAGGGAGCGTGCGGCCCGGGAGGAGgcgccgccgccgccaccCCCACCTCGACCCCGCTATGTGTCCGAGAGCAGTACCGATGGGGAGGCTGGGAACGACGACGGCATCATCGATTTCTTGGGGAAAGAAAATGACCGTgcAGAGGCACGACTCGCTGCGCGAAGGCAAGCTCGTGTGGAAGCTCGTGAAATTCGGATGCGAGAGCTGGAGAGGGTCCAGAAAGAACAGGAGGAGACGTCAGACAAAGTGTTCGATCTTCACACGACGCCCCCTCACTTGACGACGCCCCCTCATCTAGCCTCGGCCCGGCAGCCCAGCATGTCGCCCCGGGAAAGACCCACGTCGACGAACAGCTACCACTCTAGCAGGCGCTCCAGTGAAGACTCCATGGAGGACGGACTCAGCCTCAGGGACATCAGGCATGAGTTGAAGGAAGTGGAAGAAAAGTTCCGGAAGGCGATGATCGCGAATGCTCAGCTGGACAATGAAAAAGCTGCGTCCGCTTACCAGTTGGAGCTCCTCAAAGACAAGCTGGAGGACCTTGAGGAAGCCCATTCACAGctgAGCCGGGAGCACAGGGAGCGTTGTAGGGAGCACGAAGCTCTGAAGCGCGCGGCCATCAAGCTCAAGGAGGACCTGAACGCGTGTCGTATGTACCTGGAGGAGCGAGACCGACTCATTGCAGATTATGGGCTCATCATTGTGGGGGGTGAGGTCGACGAGAAGGGTGAAACCACCCCCCGCGCCCTCGTCTCCAACCAATCAGCGGAGGTGTTGCAGTCCGCAGGGGAAGGGTCGCTTGACGTTCGATTAAAGACATTGGCAAACGAAAAGAACGAGCTGGCGGACGAAGTTCGGCATTTGAAACTGGAATTAGAGGAAGAAAGAAACAGGCGACGCAGCGAGCAGACCATCAGCAATGGCCCAGTAGGGGACGAGGTTCAGCAAACGCTGAATGACTATCGCTTCCGCCTGCAGAAGGCAGAGCAAGATACCAGCACGCTGCAAGCTACGGTTGCGAGATTGGAGAGCCAAGTCATCCGGTACAAGTCAGCTGCTGAAGAGTCAGAAAAGGCCGAAGATGagttgaaagttgaaaaacGGAAACTTTTACGCGAGcacCGAGAATCGATAGCACGAATAGAGGAGCTAGAGACGTCGAACTCACATCTCCAGCGACGAATGGACAAgttaaaaaatgcaaaatcaaCACTTCTCAAGGAACTCTGA
- Protein Sequence
- MYLLKKIVSFGSGRISNDTSGEEDHSRPETPTEGPVDDDDKEYLGRQSKKKRGRSKKRKKSEKVEEKQLSVVKKDDDENSDVKDPEEEPVPRHEIPDIFFEELSETDKSREGNSTSQDVSSSDLSECLPPERPGQDVDIWADRADDDFVVRKKSVDDTENVAEEPVNFDDFWAEFDEVEGRPRKSSKPEEAISLVPSDAHNSEGRQIEAVEDFWGHSEGTTRPESGVPDGPVEGKEEAEDISDAAADREDRKVTETKQITEKIEEIDIWADREDDLPPVLEKVLDVRKFSGVKEETDIWADREDDLPPVVEKGLAVRKFSDGKEEPDIWSDREDDLPPVLEKALDVKKSSDVKEEPDLWANGSDVAGLLDKGPSEVIEISERESEEKNNEDKDTTSDASEREKEQGKGDVERTRRRSETRDRSDDTTGGSSRDESGSDGMDRSRSILHEEEDFKSTYSQEGRRDDESEAVESFWGDAEGEVPPVFHLKALEKSKSEELAGEAEEEARTEESGNEEHQPKKNETENLNNESKDEKSGEDSNEVSDSASTETSSPEESQVKEFITAALRAEETIAETDGSEKSKTNLTEEVHSNTEETEDETSTETDSPEKSLTDKQAEESSTTPEKDDSKEGKEASPAPEREPEKEVKEAHRRSFAKALQEIEAPTRKRSVLLPDSRERAAREEAPPPPPPPRPRYVSESSTDGEAGNDDGIIDFLGKENDRAEARLAARRQARVEAREIRMRELERVQKEQEETSDKVFDLHTTPPHLTTPPHLASARQPSMSPRERPTSTNSYHSSRRSSEDSMEDGLSLRDIRHELKEVEEKFRKAMIANAQLDNEKAASAYQLELLKDKLEDLEEAHSQLSREHRERCREHEALKRAAIKLKEDLNACRMYLEERDRLIADYGLIIVGGEVDEKGETTPRALVSNQSAEVLQSAGEGSLDVRLKTLANEKNELADEVRHLKLELEEERNRRRSEQTISNGPVGDEVQQTLNDYRFRLQKAEQDTSTLQATVARLESQVIRYKSAAEESEKAEDELKVEKRKLLREHRESIARIEELETSNSHLQRRMDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -