Mfus001589.1
Basic Information
- Insect
- Mesopsocus fuscifrons
- Gene Symbol
- PAXBP1_1
- Assembly
- GCA_950004255.1
- Location
- OX465373.1:14144895-14152755[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.9e-13 7.2e-09 35.7 0.0 2 64 502 564 501 580 0.91 2 3 3.8e-09 3.5e-05 23.6 0.0 125 190 585 654 570 661 0.85 3 3 0.019 1.8e+02 1.6 0.0 239 272 681 714 672 716 0.89
Sequence Information
- Coding Sequence
- ATGGCTCTCTTTAGGAAGCCAAAAAAGAACATTCGGAGAAGAAATGTTGATAGTGATGAAGAGGAAGGTGCTGAAAATGTTGGAGAACCTATGGATGTCGAAATTGTGGGAAATGGAGAGAAAAAGACCAAGGGAAAGCTGAAAGAAAATGATTGTCCAAAGGCAGCAACGTTGCTTAGTTTTGCCGATGACGAAGaagaGCACGGGGAAGTATTTCAAGTTAAGAAATCCTCCTATAGCAAAAAATTAGAGCGAAAGCTTGGGAAGGAAAGGCGACGacggaaagaaaaaattgaagtacAAGAGGAAGATCCAAGAATGAATGAGAAAAAAGAAGCGGCTGATGAGTTAGTGTTGGTGGTAAAAAGAGAGGAAGAAGAGACTGCCCGAGAACAGAAACAGAAGTTCATTCTGAATGGTCGTGCTGCTCTTATGGCTGGAAAGAACGAAGCTTCTTCGTCTGAAGACGACGAAGGCTCTGCAAGATACAAATTTTCTCAATCGAACCGGGCCGAAATCATGATAGAAAGTGGAAAGATCCCGGACGCGGCAACCATCCATGCGGCGAGGAAGCGGCGGCAGCGGGCGCGCCAACTCAATCTCGACTACATCCCCGTGGATACTCCAACTCCTAAGCCGAAGCCTGCTGGGAAAGGGACGTCTCGTCTTGTAagagaggaggaggaagatggGTCAGATGAGGAGCGGATAAACATGGGGATGGGACTCGAGGCCAACGATCTCTCTACCCGACGCGCCAACTACTTCGAGCACATCGAGCACGGGGTGGAGCCTGAACCTTTGCCCGAAGTGGCGGCTTGGCCCGTACAGCCACACATGAGCGCTGTATTGCCGCCACCTCCGCCTCCCCCTGTCACTTGCTCGAAGGACTTGGCGCTGCCGGGTATGCTGACGCAGCGACTAAGGGAGAGGCTGGCAGGGCTGCGAGAGGTCCACGGCAGCCACTGTCGGGACGTGGAACGGGTGGCTTCTGAGCTGAAAGAGCACACACAAGAGACATTACTCCTTGAAGCCGAGGCCCCTGACTTGGCGGTCAAGTTCCGTTTCTACCAGGATATGCGTGGGTATGTCACAGACCTGGTAGAGTGTCTTGACGAGAAGGTTCCGGGGCTGATGAAGCTTGAGGAGAGCGCCATAAAACTGTGGGCGGACCACGCTGCCAACTTAGCGGCGAGACGCCGGTTGGACGTCCGCGACCAGGCGGATGAAATGTCTCCATTCCCCAAAAGCAGCTCGGTACCGAAGTGGAGCCGCGAAGAGGAAGAGGCTAGAGCGCGCCGCGTGGCCGAACGGGAAGGCCGACGCTCGCGGAGGAGGCGTGCCCGAGAATTGCGATCGCTTGCTGTGCCTCACGTTGACGGGATGTCCTCCGATGACGAGGAAACGGAACTCGAAGCAGCCACTTTCTCGCAGAAACTAGAAGAGGTAGCCCGGCTGGGTTCAGGACTACTGGAGGACGTGGAAACAGAATTCGGGACAGTCGACGGGGTAGCTCAGCGTCTGGAGCGTTGGAGGGAATTTGATGGTACAGCTTATCAGGAGGCGTATGCGAGCCTCTGCTTGCCCAAACTGCTCGGCCCTCTAGTGCGTCTCAGCTTGCTCACCTGGAACCCACTGCAGgcgGACGCTTTGGAGTTAGATTGCTGCTCGTGGTGGAATCGGCTTCTGCTGTACGGTTTGCGTGAAGGAGAGACGCTTACCTCTTTGGGAAAAGATCCCGACCTCATGCTGCTCCCTGTACTGCTGGAGAAGGCCATTCTACCCAAAGTGGCAGACTTGGTAGGGTCTGTGTGGGACCCACTATCTTGTAACCAGACGCTGCGGCTCGTGAGCTTCCTGAACAAGTACGTGGTGGAGATGCCGGGCATGAGCGCACAGAGCGCGCAGGTCACTCGGCTGCTCGAAGCCGTTCTCAAGCGCCTTCGGCACGCCGTGGAGAACGATGTTTTCATCCCCATTTCATTTGTTGGGGGCGAGGGGAAGGGCGGTGGGTCGCCGTTTTTTCAACGTCAGTTTGCTAGTGCAGTAAAGCTTCTCCGCAACATGCTGAGCATGCAGGGCTTGGTGGAAGTATCGCAACTGCACGAGGTTGCCCTGGATGGTCTCCTTAACCGCTATCTGCTGGCTGCGCTGCGAACTTGTGCACCCTGTGACGCCATCTCAAAGGCTAATATGATCATCAGCACATTTCCTCGGTGGTGGTTTCAAACAGAAACCAAAATCCCAAAGCTGGAGATGTTGGGACGGCAGTTGAAACATCTCTCCACCCAAGTGCAGTCTTTTGACACCACAGAAAAAGACTCGTACGAGTTGGTACACAGCTTGCTGAGGACTATTCAGCTGGCATGTCCCGCCCAATTGTGA
- Protein Sequence
- MALFRKPKKNIRRRNVDSDEEEGAENVGEPMDVEIVGNGEKKTKGKLKENDCPKAATLLSFADDEEEHGEVFQVKKSSYSKKLERKLGKERRRRKEKIEVQEEDPRMNEKKEAADELVLVVKREEEETAREQKQKFILNGRAALMAGKNEASSSEDDEGSARYKFSQSNRAEIMIESGKIPDAATIHAARKRRQRARQLNLDYIPVDTPTPKPKPAGKGTSRLVREEEEDGSDEERINMGMGLEANDLSTRRANYFEHIEHGVEPEPLPEVAAWPVQPHMSAVLPPPPPPPVTCSKDLALPGMLTQRLRERLAGLREVHGSHCRDVERVASELKEHTQETLLLEAEAPDLAVKFRFYQDMRGYVTDLVECLDEKVPGLMKLEESAIKLWADHAANLAARRRLDVRDQADEMSPFPKSSSVPKWSREEEEARARRVAEREGRRSRRRRARELRSLAVPHVDGMSSDDEETELEAATFSQKLEEVARLGSGLLEDVETEFGTVDGVAQRLERWREFDGTAYQEAYASLCLPKLLGPLVRLSLLTWNPLQADALELDCCSWWNRLLLYGLREGETLTSLGKDPDLMLLPVLLEKAILPKVADLVGSVWDPLSCNQTLRLVSFLNKYVVEMPGMSAQSAQVTRLLEAVLKRLRHAVENDVFIPISFVGGEGKGGGSPFFQRQFASAVKLLRNMLSMQGLVEVSQLHEVALDGLLNRYLLAALRTCAPCDAISKANMIISTFPRWWFQTETKIPKLEMLGRQLKHLSTQVQSFDTTEKDSYELVHSLLRTIQLACPAQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -