Basic Information

Insect: Merzomyia westermanni
Gene Symbol: RREB1
Assembly: GCA_949987695.1
Location: OX465290.1:22286210-22294608[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.074 12 8.2 2.0 1 21 327 347 327 349 0.95

2 14 0.0015 0.24 13.5 0.0 1 23 359 381 359 381 0.97

3 14 3.5e-05 0.0058 18.6 7.5 1 23 387 409 387 409 0.98

4 14 0.62 1e+02 5.2 2.3 2 19 688 705 688 705 0.96

5 14 0.64 1.1e+02 5.2 0.2 2 23 721 743 720 743 0.88

6 14 0.036 5.9 9.2 0.1 1 23 919 941 919 941 0.97

7 14 3.4e-05 0.0057 18.6 1.3 1 23 951 973 951 973 0.99

8 14 0.00091 0.15 14.2 2.2 1 23 979 1002 979 1002 0.97

9 14 0.0044 0.73 12.0 2.0 1 23 1326 1349 1326 1349 0.95

10 14 0.00013 0.021 16.8 0.3 2 23 1727 1748 1726 1748 0.97

11 14 0.22 36 6.7 6.3 1 23 1754 1777 1754 1777 0.97

12 14 3.2 5.4e+02 3.0 4.6 1 23 1894 1917 1894 1917 0.97

13 14 0.013 2.1 10.6 0.5 3 23 1972 1992 1970 1992 0.96

14 14 0.002 0.33 13.1 4.8 1 23 1998 2020 1998 2020 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.074	12	8.2	2.0	1	21	327	347	327	349	0.95
2	14	0.0015	0.24	13.5	0.0	1	23	359	381	359	381	0.97
3	14	3.5e-05	0.0058	18.6	7.5	1	23	387	409	387	409	0.98
4	14	0.62	1e+02	5.2	2.3	2	19	688	705	688	705	0.96
5	14	0.64	1.1e+02	5.2	0.2	2	23	721	743	720	743	0.88
6	14	0.036	5.9	9.2	0.1	1	23	919	941	919	941	0.97
7	14	3.4e-05	0.0057	18.6	1.3	1	23	951	973	951	973	0.99
8	14	0.00091	0.15	14.2	2.2	1	23	979	1002	979	1002	0.97
9	14	0.0044	0.73	12.0	2.0	1	23	1326	1349	1326	1349	0.95
10	14	0.00013	0.021	16.8	0.3	2	23	1727	1748	1726	1748	0.97
11	14	0.22	36	6.7	6.3	1	23	1754	1777	1754	1777	0.97
12	14	3.2	5.4e+02	3.0	4.6	1	23	1894	1917	1894	1917	0.97
13	14	0.013	2.1	10.6	0.5	3	23	1972	1992	1970	1992	0.96
14	14	0.002	0.33	13.1	4.8	1	23	1998	2020	1998	2020	0.99

Sequence Information

Coding Sequence: ATGCTCGCCACAGCAGCCGCCGGCACACAATCATCTTTGGATGTCATCCAAGCGAGtatcaaagcaacaacaacaaatatggaACGACGTGACTCATCGACATCGGAATCATCATTGGAACATTTGGATTTGGGACATACACCAAAGAAGCTAAGCTCACATTCATCGGCCACATCAACACCACACACGGCCCTCAttaacagcaacagcaacaacagcaataatacAAATAGAATTAAcaacaaaactgaaataaaagtcGAAGACTCGGCGTGTACAGTCACAACCGCCCCCGCCACAGCGCCTTCAACAACGGAACGGCCAGATGCTGATACCACCAATAAAACATTAGCTTCCCAACAACATCGTATACAGGACTCAGATGAGGCTAATGattatgatgatgatgaagaaGAATCGTCACCAGATgaacagcaacagcagcagcacaACAAACAAAATTCGCTCGGCTCACGAGCACAACGCCATCATAAACGGCGTAGCACAACAACGCGTCTAGACAAACGTACCAGTGTACATTTGGAGCTCAGCGCAGATGATCCGAACTCGCTACGCAAGAAATTTCGTTTTAATCGCAGTACGTCCGCCTCCGAACAGCTAACAAATAATGAGTCTGGTTTTGTGGATGCGAGCTGTAGTAGTCATTATTTGAATGCATCGGCTTTGTCATTGGTAGGCGCTGCTTTGACGGCAACGGCTACACCGACGACGGCGCCAATGCTAACGACAGCGCTGTTGGCAGAGGCTACAATGGGTGTGGGTATTAGTATGACGCCAACACATAATTTAATGCCTGCAGCGGTGTCACGCTCAGCTTCGATTTCGGCTGCTGGCTCGCATAGTTCATCATCGGCTGCTTCATCACCAGGTTGTTGTGGCGCTGGTTTGACTGCATCATCTGCCTCGGTGTCTAGTCCTGAGTCCGGTATTGGTGATAAAGATCGTGAAGATATGAAGTTTGTGTGTACTATATGCGAAGTGGTTTCGGCGACGCGACACGAATTCACAAATCACATCCGATGTCATAATTACGCTTCGGGTGATACTGAGAACTATGCATGCGCCATATGCTCAAAGGTGCTCTCTTCCGCCTCCTCGTTGGATCGACATGTACTGGTGCACACTGGCGAACGACcatttaattgtaaatattgcCACCTCACCTTCACTACCAACGGTAATATGCACCGTCACATGCGCACGCACAAGCAGCATCAGCACAATCATCATCGGCGCAACTCGAATGGAACAAAGCATAACAGCAATAGTcatagcaataacaacaacagcacaatGTCTGGTAATGTCACTAACGCAACGTTGAGCAACGGCTCCAACTACGCACCACCCGCCACCACTAATGCCACTTATAAGCAATTAAGCCACGAGCTGCTTGGCGAAGGTGTCAAATcatcaacagcagcagcatcaAACGAAGCCATGGAAACAATTAAAATGACAGATGTTACTACTAGGGGAGGGCTGCTTGGAAGTGTGACGACAGGTGCCGCTGCTAATGTAGGTGTTAATGGTAAACGCTTGCACAGCAGTGGCGTAGAAAGTTGCGAAAGTGATGGTGGTTGCTCAACGGACTCCTCATCAAGTGCCATCAGTCATAGCTCAAATAAACataataatagcaacaacaataataataatactaaagacaacatcaacaataataTTAGCAACAACTACAATAACACAAATGAAAAGCGtaatatttttggtaattttaagCGTAAAAGCACCAACCAACATGATGAAATGGATGTGGACGCAGAGGTCGATGCTGCCAGCATGACAACGGTACTGAAACGACGCATGAAGACAACAATAAACAATAATGTTATCACTGCGGATGTGGATGAAGTGAATGAGCAACGGAAGTCCATGACAACGCCCTCCGAGAATGTTGAGGCGGACGACCAGAAGCCCTCATTCGCTTGTCCCGTCTGTCCTGTCTGCAATGCTGGCGACTTCACAGATATGCGCGCGTTGGATAACCATTTAGATAGTGAGCATGCGGATATACCAGCTAAATGTCGCCATTGTGAGGTAGTATTTCGTACACATCGTCAGCTTAGTTTGCATCCATGCACGCAACGTTTGCTCAGTAATCGTCATATGCCACTGGTAGAATGCGTGAAATGTGGACTAAGTTTTGCTGATGGCAGCGCGCTAGAATTTCACGCACGCGAATGTCACAATGCCGAAGTACCACTACCTACGCGACGTAGTCGTAGCTTAAGCGATAGTTACACCACAAATGCGCCACCACCACCACGACCATCACTAACGGAAGCCGAAGTGGAGGAGAAGCAGGCGCGCGAAATGCGTAATCAGTTTTTACGTCAACTTTACATGCAAAGTCAAAAACCGTACAGCACACAAAATATGATCTCACCACACGCTGAGTTGAGCGCTAATGAAGATGAGGAGCGCGGCGAGACCGTCGTCAACGTAAGCGCTAACGATATTAAATTAGAAGCAGATATCGAACAGACGACAGATGAAATGGCGCATAATATACAGTCACAGCATGACTCCAAAGATTTGGCTGATATACAATCCATACTGAATATGACCTCCTCATCGTCCACCtcgaattttctcaaaaactttgAGCAATCCGTGAATACACCATCGAGTAATTACAGTTTTGATAAAGATGAGGAAGAGGCGCAAGATTGTTTCACCTCCGAATTTCGTAAAATGAAATTGCGCGGTGAATTTCCCTGCAAGCTGTGCACTGCCATCTTTCCGAACTTGCGAGCGCTAAAAGGACATAATCGCGTGCATTTGAGCGCTGTTGGTCCAGCCGGACCATTCCGTTGCAACATGTGCCCCTATACGATATGCGACAAGGCAGCGTTGGTACGTCACATGCGCACACATAACGGTGATCGTCCATACGAGTGTGCCGAATGTAATTATGCATTCACCACGAAGGCCAATTGCGAACGACATTTGCGTAATCGACATGCGAAGACGACGCGTGATGAGGTGAAACGTGCTATTATTTATCATCCATCTGAGGACTCGACATGCGATGATCCCGCAAAGAAATTACATATGTTCTCTTCGCCTGATTTCGAAGACGACATGGACTTGCAATATCAACAGCATCAGCCCAAAGATCGTTCTACACCAGTGTCGCATCTCAAAGAAATGCTAACAGCTGAAAGTCCTACAACCAAACCGATGAAGATACAGGTGAAGAGTTTGGAACAATTGCTTGATAAGTCCAGCAGTTCGATTGGTAGTGCGAGCTACAATGAGACGTACGAGGAACGTGTTGTTGCGCCACCATGCACGCAACCAGCCGATGTGGCGCCAATCGATTTGAGTATGGATGTGCTGGATTTAAGCAAGAAGCCCACAGTGAAGCCTGCAGCAGAAAAGGAGTTTGTGGCCGCACCCACACCTGCAGCACTACCAATTATCGATAACAACATCGATGCTGAAAAGAAACTCGATATATTCTCGTATGTGAAAGAGAATCTTAACATGCCAAAAATGCTTGAACTCTGGAGCTTATCAACACAATTTCCATTCATGCCCGACTTTCGTCCGCTAATGAACCAAATGTTTGCCAACACCGCCGCTGCGGCTGCTGCAGCGGCTGGCAATCCTTTTGGACCGCCTACCCTCGATATGAACAAAGCGGCGAGCATGCCAGCTCCGCCAAATATGGCACAGTCCATGTTGCCACATTTGAATTCATTGATGGCCGATAAGTTGAATACGCCAGCAGATCCGAATATCATGAGTCAAATGCTACCCAAAACACTGATGACACCGCCAAGCCAAAACTCAGCAATACATATGCCACGTCACTCGCCACACATGCCCACGCAGACTGTGCTGCCGGGTGGTCCAGTAAAGATGGTGATCAAAAATGGCGTGCTTatgccaaaacaaaaacaacgtcGTTACCGCACCGAACGTCCATTCGCTTGTGAACATTGCTCGGCGCGTTTCACGCTACGCTCGAATATGGAACGTCATGTCAAGCAGCAACATCCACAATACTACGCACAACGTCATCGTAGCGGACATCATAGCATGCGTGGACGTGGTGCCGGCGGTGCCATAGCTATTAATAGCATGTCGCACTTGCAAGCTGCTTTCGTTCAAGCGCACAATCAAGTCAACAGCCATCAAACGCAAACCAATGGATCGAGCGGTTCACCCATTTCAGAGCAAGTGAAGTATGCGATATTGGCGCAACAGCTGAAGGCGCGCAAAGATACGGATTTGTTGCAGCAAGCCCTAGCGCATGGTTCGAGCAGCATCGCAAATAATCATCACCTTCTATTGAATGCTAGCGGATTGGGCGCACTCGGCGCGCCACAAAATGGGCTTCAGTTTCCGTTTAATACACTGAGCCAACAGTCGGCAAATATGAACGGTGTCATGGAAGATGATGAACCCAAACTGGTTATTGATGAAGACGACGAAGATGAAGATGTTGAAGAGATActcgatgatgatgatgaaaatGAGAATGAGAATGAAGAAGATGATCAAGAAGAAGTTGAGTTGCTGCAGAACGCAAGCGAACCCATTGAAAACAATATGCGCACAGAGCAAGCAGCGCCCATGCGTGAAGACCTTAAGAAAGCGCCGTCCAATAGTACTTCTGTCAATGAGACAGCCAAAAAAGTTGCCGAAACTATATTAGAACAAGCAATTAAAACGGGACAAAGGCTCAATCAAACCCCTGCAAAACCCAATGCAGCATTTCCAGCAAAACCTATGCCTGCGAAACCCCTGCCAATAAAGGCCGCAGCGCCTCCAACTCCTGCAGCGCCTACTGCGCCAGTCACGCCCGCCAACACAATGAAAGCCATGATCGCACAGGCGGAATCAGTGGGCAAGTTCCTTAAAGAGGTCGCCAGCTCGCCATTCAAGGATGAGTCACAAGACTTGGTACCTGTAGCCAAGCTAGTCGACAATGCGACTAGTAATTCCGTCTCCTTTAACAATTATTTCCGTCCGAGCGATGTAGCCAATCACATGGAACAAAGCGACGAGGAGGGTTTGGTTGCTTCCGGTAGCGCCAGCGAAAGCAATAACTCGGGCACTGAAGATGTTGCAGCACCAGTTGAACCTAAAAAGAAATCCGCCTACAGCTTAGCACCCAATCGTGTGTCGTGCCCCTACTGTCAACGCATGTTCCCGTGGTCAAGCTCACTGCGGCGCCATATACTCACTCATACCGGTCAAAAGCCATTCAAATGCTCGCACTGTCCGCTACTCTTCACCACCAAGAGCAATTGTGATCGTCATTTGTTGCGTAAGCATGGTGATGTGGAATCAGCCGTCTCGGTTTATGTGCCAACTGAAGATGTTAACGAGCCAATACCGGTGCCAAAATCAGTTGAAGAGATCGAACAGCAGCAACGTCAGCGTGAAGAAGAACtgcgtaaacgcaaagctgaagagGCGCAAGTACAACATGAACGCCGCGAAAAGGAACAACGTCTGCAGCAAGAGCAAGAACAACAAAGTAAACTATTTCAACATCTGCAACAACAACTTAATGCTACAATGAACACCACTGCACTACCGAATGCAGTTAACAGTGCAGCAGATTCCGCTGATGCGCGCGCCAAAGAAAATCTCTCTCAACAACTCAATGCCGATTTGCCATACAAGTGTCATCTGTGCGAAAGCTCTTTTGTCGAACGTTTCAATTGTTTGGAGCACATCAAAATGCAACACATTACCGAATTCACGCTACTCCTAGCAAAAGGTGCCATCGTCAGCGATGCTGAAGCCAATCAAACACAATTActcgaagaggaagagagacgTGTGGGCGAAGAGGCAAACAATTTCTCTCTATTACCCAAGCTGCCAGCTTACACAAATCGCAAAGTAATCTGCGCATTTTGTGTGCGTCGTTTCTGGTCTACCGAAGACTTACGCCGTCACATGCGCACCCACTCGGGTGAGCGCCCATTTCAATGTGAAATCTGTTTGCGTAAATTTACGCTGAAACACAGCATGTTGCGGCACATGAAAAAGCACACAACGGATCGTGGTCAAAATAGCTCAGCTGGTGGTGATGCCTGCACAACGGGCAATAGTGGTTCCGACTTCTCTGATGATGAACAAATGCCAACACCTACAACCACGTCGATAAATGTCAGCGCGGTGTCTAcatcgacaacaacaacaacagcgcatACCACTCTCTCTGCTTTGCGTACACCCAGAATTCAAGAGCTCTTGAGCAAAGCAAACGAATGGCGTAGCAGTCATTTAGTTGGCGAACATAAGGAGAATATTGCCGAAGAGCAACCGAATGGATTGCATAGTGATCTGATTGGAAATCTTTTGGGCATCAGCGATCAAGGTATACTCAATAAATTGCTATCCTCAGCTGATGAAGCCGCAAAACTTTTGGGTGTGGAGAAGTAA
Protein Sequence: MLATAAAGTQSSLDVIQASIKATTTNMERRDSSTSESSLEHLDLGHTPKKLSSHSSATSTPHTALINSNSNNSNNTNRINNKTEIKVEDSACTVTTAPATAPSTTERPDADTTNKTLASQQHRIQDSDEANDYDDDEEESSPDEQQQQQHNKQNSLGSRAQRHHKRRSTTTRLDKRTSVHLELSADDPNSLRKKFRFNRSTSASEQLTNNESGFVDASCSSHYLNASALSLVGAALTATATPTTAPMLTTALLAEATMGVGISMTPTHNLMPAAVSRSASISAAGSHSSSSAASSPGCCGAGLTASSASVSSPESGIGDKDREDMKFVCTICEVVSATRHEFTNHIRCHNYASGDTENYACAICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHRRNSNGTKHNSNSHSNNNNSTMSGNVTNATLSNGSNYAPPATTNATYKQLSHELLGEGVKSSTAAASNEAMETIKMTDVTTRGGLLGSVTTGAAANVGVNGKRLHSSGVESCESDGGCSTDSSSSAISHSSNKHNNSNNNNNNTKDNINNNISNNYNNTNEKRNIFGNFKRKSTNQHDEMDVDAEVDAASMTTVLKRRMKTTINNNVITADVDEVNEQRKSMTTPSENVEADDQKPSFACPVCPVCNAGDFTDMRALDNHLDSEHADIPAKCRHCEVVFRTHRQLSLHPCTQRLLSNRHMPLVECVKCGLSFADGSALEFHARECHNAEVPLPTRRSRSLSDSYTTNAPPPPRPSLTEAEVEEKQAREMRNQFLRQLYMQSQKPYSTQNMISPHAELSANEDEERGETVVNVSANDIKLEADIEQTTDEMAHNIQSQHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSFDKDEEEAQDCFTSEFRKMKLRGEFPCKLCTAIFPNLRALKGHNRVHLSAVGPAGPFRCNMCPYTICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSTCDDPAKKLHMFSSPDFEDDMDLQYQQHQPKDRSTPVSHLKEMLTAESPTTKPMKIQVKSLEQLLDKSSSSIGSASYNETYEERVVAPPCTQPADVAPIDLSMDVLDLSKKPTVKPAAEKEFVAAPTPAALPIIDNNIDAEKKLDIFSYVKENLNMPKMLELWSLSTQFPFMPDFRPLMNQMFANTAAAAAAAAGNPFGPPTLDMNKAASMPAPPNMAQSMLPHLNSLMADKLNTPADPNIMSQMLPKTLMTPPSQNSAIHMPRHSPHMPTQTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRHRSGHHSMRGRGAGGAIAINSMSHLQAAFVQAHNQVNSHQTQTNGSSGSPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSIANNHHLLLNASGLGALGAPQNGLQFPFNTLSQQSANMNGVMEDDEPKLVIDEDDEDEDVEEILDDDDENENENEEDDQEEVELLQNASEPIENNMRTEQAAPMREDLKKAPSNSTSVNETAKKVAETILEQAIKTGQRLNQTPAKPNAAFPAKPMPAKPLPIKAAAPPTPAAPTAPVTPANTMKAMIAQAESVGKFLKEVASSPFKDESQDLVPVAKLVDNATSNSVSFNNYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVAAPVEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRQREEELRKRKAEEAQVQHERREKEQRLQQEQEQQSKLFQHLQQQLNATMNTTALPNAVNSAADSADARAKENLSQQLNADLPYKCHLCESSFVERFNCLEHIKMQHITEFTLLLAKGAIVSDAEANQTQLLEEEERRVGEEANNFSLLPKLPAYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHTTDRGQNSSAGGDACTTGNSGSDFSDDEQMPTPTTTSINVSAVSTSTTTTTAHTTLSALRTPRIQELLSKANEWRSSHLVGEHKENIAEEQPNGLHSDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358301;
90% Identity: -
80% Identity: -