Basic Information

Insect: Merodon equestris
Gene Symbol: -
Assembly: GCA_958301585.1
Location: OY284413.1:43247569-43249068[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.18 38 6.5 0.4 2 23 86 107 85 107 0.95

2 13 0.0014 0.31 13.1 0.6 1 23 160 183 160 183 0.98

3 13 0.00024 0.053 15.5 5.1 2 23 192 213 192 213 0.97

4 13 3e-06 0.00066 21.5 1.9 1 23 219 241 219 241 0.99

5 13 2.5e-05 0.0054 18.6 0.2 1 23 247 269 247 269 0.98

6 13 3.2e-05 0.0069 18.3 4.7 2 23 275 296 274 296 0.96

7 13 3.6e-05 0.0077 18.1 2.3 1 23 302 324 302 324 0.98

8 13 1.2e-06 0.00026 22.8 1.4 1 23 330 352 330 352 0.99

9 13 1e-05 0.0022 19.8 1.9 1 23 358 380 358 380 0.98

10 13 5.7e-06 0.0012 20.6 0.6 1 23 386 408 386 408 0.98

11 13 1.6e-05 0.0035 19.2 0.1 1 23 414 436 414 436 0.98

12 13 2.4e-06 0.00053 21.8 1.3 1 23 442 464 442 464 0.98

13 13 6.9e-06 0.0015 20.4 0.3 1 23 470 493 470 493 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.18	38	6.5	0.4	2	23	86	107	85	107	0.95
2	13	0.0014	0.31	13.1	0.6	1	23	160	183	160	183	0.98
3	13	0.00024	0.053	15.5	5.1	2	23	192	213	192	213	0.97
4	13	3e-06	0.00066	21.5	1.9	1	23	219	241	219	241	0.99
5	13	2.5e-05	0.0054	18.6	0.2	1	23	247	269	247	269	0.98
6	13	3.2e-05	0.0069	18.3	4.7	2	23	275	296	274	296	0.96
7	13	3.6e-05	0.0077	18.1	2.3	1	23	302	324	302	324	0.98
8	13	1.2e-06	0.00026	22.8	1.4	1	23	330	352	330	352	0.99
9	13	1e-05	0.0022	19.8	1.9	1	23	358	380	358	380	0.98
10	13	5.7e-06	0.0012	20.6	0.6	1	23	386	408	386	408	0.98
11	13	1.6e-05	0.0035	19.2	0.1	1	23	414	436	414	436	0.98
12	13	2.4e-06	0.00053	21.8	1.3	1	23	442	464	442	464	0.98
13	13	6.9e-06	0.0015	20.4	0.3	1	23	470	493	470	493	0.96

Sequence Information

Coding Sequence: ATGGCTGGCGAGATGACACAAATCGAATTCTCCGATATGGTCAAGGACGGTAGCTGCACTTTCTCCGATTGGCCAGATGAAGATGTGGAAGACGGCGACACGCACATGACGCAGTTCCTCTTGACTGAGGATATGATCAAGCAGGAGCCCGAATTCATAATTGGCGCAGATGATATTCAGGAAGAGCAGAAGATTCGGGCCTACTTGAAAAAGGTCAACATAGACGAAGACGACAGGAAGCAACTCAATTGGCTCACGTGTATGCTATGCGATGAACGTTTTCTATCAACCAAAGAGCTCTCGCTGCACGTGCAGAGTCATGCGAAAAAGGCCCTCAAGCAGGAGAGTGATGTAATGCCAGCACCGAAGGAGTACACCAATCGTCAAGCACCAAAAACCCCGTACACTGGATTCTCCCGACAGGAACTATTCCAGGACTACATTAACATAAGCGTTGAGCTGGACGGTAAGCCGACATACACCTGCAAGCTCTGTCCAAACAAGAACTACGCCCGGCAAGTATCGATTCGGAATCACATGCGTATCCACGAGAACCCAACGTATAAGGAGCGCTCCTGTCACATCTGCCACAAGACATTCCTCCGACGCGATACACTCTTAGTGCATCTTCGCACTCACACCAACGAACGAAGGTACAAGTGCAACGTCTGCGAAGCTAGCTTCACACATTCCAGCTCGTTAGTCTCGCACAAACGCATTCACACCGGGGAGAAGCCCTATGTTTGCGCCATTTGCAAGAAATCGTTCCGCGAATCCGGCCAACTTGGCGCTCACAAGAAGATCCACTTCGACAAGCTGTTGCAGTGTCCCAAATGTGACAAGAAATTCACTTCCAATAAAACGCTCCGAATCCACTGCCGAACACACACCGACGAACGTCCCTACCCGTGCAATATCTGCGGCAAGATGTTCCGTTGCACCACAAGTCTCACAACCCATCTCCGAGTCCATACCGGCGAAAAGCCCTACAAATGCGAGATTTGCTCCTACGCCACCAAGCAGTCCGGCTATCTGCGCACGCATATGCGAACCCATACCGGCGAGCGTCCATACAAATGCACCTACTGCGACAAGGCCTTCTCAGAGAAGAAACGTCTTGTGACTCACACACGAGGTCATACCGGTGAACGACCCTACAAATGCATATACTGCGATGCGGCCTTCGCACGAAACGACAACCTCAAATACCACCTAAGAACACATACCGGCGAGAAGCCATACGAATGCGGCGTATGCGGCAAACGATTCGCTCAGGGAACCGCTCTCACTATTCACACAAAGATCCATACCGGAGTCAAGCCGTACTCTTGCCCGCATTGCGACATGAAATTCCGACAAAGTGGAACTTTGGTAACCCATTTGCTGATGCACACCAACGAACGCCCATTCAAATGCGATCTCTGCGAAAGAGGCTTCAGGCAAAAGGCTCTACTTAAGCGACACGTAGCATCTGCCCATGGTAATAGTATAGTTCAGTAG
Protein Sequence: MAGEMTQIEFSDMVKDGSCTFSDWPDEDVEDGDTHMTQFLLTEDMIKQEPEFIIGADDIQEEQKIRAYLKKVNIDEDDRKQLNWLTCMLCDERFLSTKELSLHVQSHAKKALKQESDVMPAPKEYTNRQAPKTPYTGFSRQELFQDYINISVELDGKPTYTCKLCPNKNYARQVSIRNHMRIHENPTYKERSCHICHKTFLRRDTLLVHLRTHTNERRYKCNVCEASFTHSSSLVSHKRIHTGEKPYVCAICKKSFRESGQLGAHKKIHFDKLLQCPKCDKKFTSNKTLRIHCRTHTDERPYPCNICGKMFRCTTSLTTHLRVHTGEKPYKCEICSYATKQSGYLRTHMRTHTGERPYKCTYCDKAFSEKKRLVTHTRGHTGERPYKCIYCDAAFARNDNLKYHLRTHTGEKPYECGVCGKRFAQGTALTIHTKIHTGVKPYSCPHCDMKFRQSGTLVTHLLMHTNERPFKCDLCERGFRQKALLKRHVASAHGNSIVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01395957;
90% Identity: iTF_00241666;
80% Identity: iTF_00992222;