Mequ013707.1
Basic Information
- Insect
- Merodon equestris
- Gene Symbol
- -
- Assembly
- GCA_958301585.1
- Location
- OY284413.1:148529678-148531749[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-07 0.00021 22.5 0.0 8 38 22 52 20 60 0.86
Sequence Information
- Coding Sequence
- ATGGTGCGAACGTACAACAAAAAAACGGCAAGAACTAACATCGATGAAGTTGCGGTGGGTTCTGCGATATCCGATGTGCTGGAAGGCAGACTATCAATCAGAAAAGCTGCAGATAAATATAATTTGAAGCCGGCCACTCTTCAAcatagaattgaaaaaaaaagaagaccgaAAAAGAACATGAACGAGTCTGAAGAAATGATAGGCAATGAGCAATATGTAACACCCCCACCGCCTCCTACTACCGAGCGGTCAAATGCTACAAAAGACTCTGAGTTTTATGATATGCTTTCAACATCAAGAGCTTCTGAGGTAATCTATCGAGCATCCACGTCAAATTTGCTCATAACCCCTGAAAATGTAAGGCCTTAcccaaaaattaccaaaatatcAACGactaaaaagggaaaagaaaaggGTAAGTCAAGATTCTATACAGATACTCCGGAAAAGACAAGATTAGAAGAACTACAGAGATCTAAACGTGAAGAAAACATGAAAAAGGAACAAAGAAAACGTGCAAAGGACCTAAAAAGTGCTCAGAAATTGCtaggaataactacaaatccaatCATTAAACCAAAAAGAAATTCTCATAAGGCTATAATTATGGAATCAGACTCTTCAAACTGTTCCTGTGAAATAGAATTGCAAGAATCATTCGACTCCGAAGAAGACAATGTGGAATTATCCGAGGATGACACTATCAATACTGCTCCACCAATAGCCACTGATCTCCATGAAGGGGATTATGTTATTATAAAAGTAGTTAACTTAGAAAAGAAGCGACCCTTTAAGCATTTCGTtgggaaaattattttgagatACGAAGAGGGGCAAGGAAACGATTTCTACGTATCTTTTTTGAAACGCAAGCCGACTGGAACCTTTGTATTCCCTGATGTTAAAGACGAGGCTTCTGTTAATATTTCTGAGATTATCCTGAAGTTACCAAATCCAATAATCAATAAAGGCACTAACAGAACAAcgtctttatttaattttaagataAATCTATCCCCCTACAATATTTCTATGTAA
- Protein Sequence
- MVRTYNKKTARTNIDEVAVGSAISDVLEGRLSIRKAADKYNLKPATLQHRIEKKRRPKKNMNESEEMIGNEQYVTPPPPPTTERSNATKDSEFYDMLSTSRASEVIYRASTSNLLITPENVRPYPKITKISTTKKGKEKGKSRFYTDTPEKTRLEELQRSKREENMKKEQRKRAKDLKSAQKLLGITTNPIIKPKRNSHKAIIMESDSSNCSCEIELQESFDSEEDNVELSEDDTINTAPPIATDLHEGDYVIIKVVNLEKKRPFKHFVGKIILRYEEGQGNDFYVSFLKRKPTGTFVFPDVKDEASVNISEIILKLPNPIINKGTNRTTSLFNFKINLSPYNISM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00991726;
- 90% Identity
- -
- 80% Identity
- -