Mequ011859.2
Basic Information
- Insect
- Merodon equestris
- Gene Symbol
- -
- Assembly
- GCA_958301585.1
- Location
- OY284413.1:118836309-118838395[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-07 0.00029 22.0 0.0 8 39 22 53 20 58 0.89 2 2 9 5.8e+03 -1.4 0.0 21 29 78 86 77 87 0.84
Sequence Information
- Coding Sequence
- ATGGTGCGAACGTACAACAAAAAAACGGCAAGAACTAACATCGATGAAGTTGCGGTGGGTTCTGCGATATCCGATGTGCTGGAAGGCAGACTATCAATCAGAAAAGCTGCAGATAAATATAATTTGAAGCCGGCCACTCTTCAAcatagaattgaaaaaaaaaagaagaccgaAGAAGAACATGCAAAGCTTAGGGTAGCTTTCAACGACTGGCACGTTAATCATTCTGGAAAAGCATTAACAATTTATGACATTCCAAGTCTTGCTAAATTGGCGTTTTTTGAATCGTTCACTGCCAAAAATATCATGAGCGCATTTGCTAAACCTGGAATTGTGCCATTTAATAAATTGGCATTTTCAGATGAAGAGTATTTTCCTTGTGAGATTTATAGGAACGAGTCGGAAGAAATGATAGTCAATGAGCAATGTGTAACACCCCCACCGCCTCCTACTACCGAGCGGTCAAATGCTACAAAAGACTCTGAGTTTTATGATATGCCTTCAACATCAAGAGCTTCTGAGGTAATCTATCGAGCATCCACGTCAAATTTGCTCATAACCCCTGAAAATGTAAGGCCTTAcccaaaaattaccaaaatatcAACGactaaaaagggaaaagaaaaggGTAAGTCAAGAATCTATACAGATACTCCGGAAAAGACAAGATTAGAAGAACTACAGAGATCTAAACGTGAAGAAAACATGAAAAAGGAACAAAGAAAACGTGCAAAGGACCTAAAAAGTGCTCAGAAATTGCtaggaataactacaaatccaatCATTAAACCAAAAAGAAATTCTCATAAGGCTATAATTATGGAATCAGACCCTTCAAACTGTTCCTGTGAAATAGAATTGCAAGAATCATTCGACTCCGAAGAAGACAATGTGGAATTATCCGAGGATGACACTATCAATACTGCTCCACCAATAGCCACTGATCTCCATGAAGGGGATTATGTTATTATAAAAGTAGTTAACTTAGAAAAGAAGCGACCCTTTAAGCATTTCGTTGGGAAAATTATATTGGGATACGAAGAGGGGCAAGGAAACGATTTCCACGTATCTTTTTGGAAACGCAAGCCGACTGGAACCTTTGTATTCCCTGATGTTAAAGACGAGGCTTCTGTTAATATTTCTGAGATTATCCTGAAGTTACCAAATCCAATAATCAATAAAGGCACTAACAGAACAGcgtctttatttaattttaagataAATCTATCCCCCTACAATATTTCTATGTAA
- Protein Sequence
- MVRTYNKKTARTNIDEVAVGSAISDVLEGRLSIRKAADKYNLKPATLQHRIEKKKKTEEEHAKLRVAFNDWHVNHSGKALTIYDIPSLAKLAFFESFTAKNIMSAFAKPGIVPFNKLAFSDEEYFPCEIYRNESEEMIVNEQCVTPPPPPTTERSNATKDSEFYDMPSTSRASEVIYRASTSNLLITPENVRPYPKITKISTTKKGKEKGKSRIYTDTPEKTRLEELQRSKREENMKKEQRKRAKDLKSAQKLLGITTNPIIKPKRNSHKAIIMESDPSNCSCEIELQESFDSEEDNVELSEDDTINTAPPIATDLHEGDYVIIKVVNLEKKRPFKHFVGKIILGYEEGQGNDFHVSFWKRKPTGTFVFPDVKDEASVNISEIILKLPNPIINKGTNRTASLFNFKINLSPYNISM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00991737;
- 90% Identity
- -
- 80% Identity
- -