Mequ004189.1
Basic Information
- Insect
- Merodon equestris
- Gene Symbol
- -
- Assembly
- GCA_958301585.1
- Location
- OY284413.1:26983482-26984072[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-09 1.4e-06 29.4 0.0 2 39 17 55 16 58 0.91
Sequence Information
- Coding Sequence
- ATGGTGCGGAAGTATAAACAAAAGGGCACACGAACCCATGAAGTTGATGAAGAATCCGTTAAGTTAGCAGTTAAAGATTTAATGCAAGGACGGTTGTCTTATAGAAAAGCTGCGTTGAAATACAACATTAAAACATCCACTTTGCAAAGCAGAGTAAAGAAACTGAGAGATGGTATTGACAAAGAAAGACCGTCACGTATTTTTCATTCCAAATTCACAAGTTTGCAAGTTTTCTCCTTGGAAGAAGAGGAGCGTTTAAATGATTACATTGTTAATTGCTGCAAGATGCATTATGGGCTAACTACGGTACAAATTCGGAAACTTGCTTACGAATATGCAAAAGCATTGAATTTAAAGTTTCCAGCGAAATGGGACGAAAATCAAATGGCTGGCTTAGAGTGGATGCGTAAATACAGGGAGCGAAATTCAAATCTCAGTTTGCGAAAGCCAGAAAACACCAGTGCTGCAAGATCATTCGCTTTTAATAAAACTGCAGTTACAGAGTTCTACAACAATTTCGTCGAAGTCTTACAGCGACATAATTTTACAGCAGACAGAATATTTAACTTTTACTGTCTTAGACACTCCTAA
- Protein Sequence
- MVRKYKQKGTRTHEVDEESVKLAVKDLMQGRLSYRKAALKYNIKTSTLQSRVKKLRDGIDKERPSRIFHSKFTSLQVFSLEEEERLNDYIVNCCKMHYGLTTVQIRKLAYEYAKALNLKFPAKWDENQMAGLEWMRKYRERNSNLSLRKPENTSAARSFAFNKTAVTEFYNNFVEVLQRHNFTADRIFNFYCLRHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01520908;
- 90% Identity
- iTF_00991699;
- 80% Identity
- -