Mequ026305.1
Basic Information
- Insect
- Merodon equestris
- Gene Symbol
- br
- Assembly
- GCA_958301585.1
- Location
- OY284414.1:134183369-134184794[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.4e-14 4.1e-11 43.9 0.0 3 43 290 330 288 332 0.91 2 3 0.052 34 5.8 0.0 27 37 361 371 352 376 0.87 3 3 2.5e-18 1.6e-15 58.0 0.0 4 44 400 440 398 441 0.95
Sequence Information
- Coding Sequence
- ATGAACCACCTTAAGTGGATGGGCCATACGGCAACCATCCTCGACATACAAaagtctcttaaaaatgatCCAGACACTTGTGATGTTACCCTCGCTTGTCGGGGTAAATCTGTTAAGGCACATCGTTTCGTACTTTCATCGTGTAGCGATCTGCTACAAGATATCCTAAGCGATGTGCCCGTTGGCCAAGAGGCAACTATCGTAATTCCCGATGTCCGAGGCAGTCTGCTTGAttgtgttttaagttttatatacataggcGAGACCAGTCTGTCGTCGACGAATCTGTCCGAGTTTCTGGAAGCTATTAGTATACTGGGCATCAAAAGCGCGATTAGTTTTGAATGTGCAAACAGCAGTTCATTGGCCAGTGGCGCCAATAAGAATGTTGCAGAAATGACCGAAATGGAAGAGGAACTGATGGAAGCCGAACCGGAGCAGGAAATTGTCGAAAAGGATGACGAGGAGGATCAAGTTGTCACAGAGAGTAATAGCGTGCGGGAGCTTGAATTTCTTGAAGTATACAATGAACATGAAAAAATCAGTTACACAATCGAGAACATAACACCGACGAATCCGAATGAATACATTCTAACCGAGAACTCGGGCACATTCACCCTGACGCCGAATGCGAAGATCGACGGCAGTGAAGTTACCACACTTGTCGATAAAACCGACGATGATAATCCGATTATGGAGCACTATGTCGGCGATCCGATCGGCGATAGTAGCCAGTGCTCGAGTATGGATATGAAAGATGATAAATGTATAAAGAAGCTAAAGGACGAGTTCAGTGAATTCCAAGCGTTGAGTCCCGAGGACAGTAAAGGCTATCAGAATTTCAATGAAACCCAATCGGCCCGTGTCGAGGCGCTTGAGAATGCCGTGCTCGCCGTCGTTGATGAGGGTATGAGTCTACAAAAGGCTGCCGTCAAATAtaatatctcgaaaaccgttCTCTGGCGTCGAGTGAAAAAGCATCCGCTTTATATGAAGACTACCCGTGAGAATCCGCTTATAACACAAGCCTGCGAACGTCTTAAAAACGGCGATTCATTGAAAAGTATCAGTCAGGCACTCGATATTCCGATGTCAACGCTGCACCGACATAAGGTTCGACTGGCGCAGGAGGGTAGGCTGCCGGAACACGTCACCTTCAAGAAACGCGGACCCATGTCGAAGGAGATGCTTAAGAAGAAACTCACGAAAGCAGTGGAAGCATGCTCAAACGGTGGAATGTCACAAAATCATGCAGCGAATGTGTTCGACGTACCGAAAAGTACACTCTGGCGacatttacaaaagaaaatgttcACCGGAAACGATTCGAAAGACATTAGTATTAAGGAGGAGGTAGTGTAA
- Protein Sequence
- MNHLKWMGHTATILDIQKSLKNDPDTCDVTLACRGKSVKAHRFVLSSCSDLLQDILSDVPVGQEATIVIPDVRGSLLDCVLSFIYIGETSLSSTNLSEFLEAISILGIKSAISFECANSSSLASGANKNVAEMTEMEEELMEAEPEQEIVEKDDEEDQVVTESNSVRELEFLEVYNEHEKISYTIENITPTNPNEYILTENSGTFTLTPNAKIDGSEVTTLVDKTDDDNPIMEHYVGDPIGDSSQCSSMDMKDDKCIKKLKDEFSEFQALSPEDSKGYQNFNETQSARVEALENAVLAVVDEGMSLQKAAVKYNISKTVLWRRVKKHPLYMKTTRENPLITQACERLKNGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPEHVTFKKRGPMSKEMLKKKLTKAVEACSNGGMSQNHAANVFDVPKSTLWRHLQKKMFTGNDSKDISIKEEVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_00688521;
- 80% Identity
- iTF_00991936;