Esab017486.1
Basic Information
- Insect
- Eumerus sabulonum
- Gene Symbol
- br
- Assembly
- GCA_951905685.1
- Location
- OX645061.1:28187906-28189329[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7e-14 3.1e-11 43.9 0.0 3 43 290 330 288 332 0.91 2 3 0.057 25 5.8 0.0 27 37 361 371 352 376 0.87 3 3 4.4e-18 2e-15 57.4 0.0 4 44 400 440 398 441 0.94
Sequence Information
- Coding Sequence
- ATGAACCATCTGAAGTGGATGGGCCATACGGCAACCATCCTCGATATACAAAAGTCTTTGAAGGATGATCCGGACAGTTGTGATGTTACGCTCGCGTGTCGCGGCAAATCGGTTAAGGCCCATCGTTTCGTCTTGTCGTCGTGCAGTGATTTGCTACATGACATCTTGAGTGATGTGCCCATCGGCCAGGAGGCTACAATCATTGTGCCCGATGTTCGGGGCAGTTTGCTCGATTGTGTTTTGAGTTTTATCTACATCGGTGAGACGAGCTTGTCGTCGACAAATCTCTCCGAATTCCTGGAGGCTATCAGTATCCTAGGCATTAAGAGTGCCATTAGTTTTGAATGTGCCAACAGTAGTTCGGTGATAAGTGGCGCGAGTAAGAATGTAGCCGAAATGACCGAAATGGAAGAGGAACTAATGGAAGCCGAACCGGAGCAGGAAATTGTCGAAAAGGACGACGAGGAGGATCAAGTTGTTGCCGAGAGTAGTAGCGTACGTGAGTTGGAATTCCTAGAAGTCTACAATGAACACGAGAAGATCAGCTACACCATCGAGAACATCACACCGACTAATCCGAATGAGTACATCCTTACCGAGAGTTCAGGTACATTCACGCTGACACCGAATGCCAAGATCGAAAGCAATGAAGTAACAACTCTTGTCGACAAACCGGACGATGATAATCCCATCATGGAACATTACGTTGCCGATCCGATCGGTGATAGTAGCCAATGCTCGAGTATGGACATGAAAGACGACAAATGTGCGAAGAAATTGAAAGATGAATTCAGTGAATTTCAAGCTCTCAGTCCGGACGACAGTAAGGGCTATCAGAATTTCAATGAAACCCAATCGGCCCGGGTCGAGGCTCTGGAAAACGCCGTACTCGCCGTCGTTGACGAGGGAATGAGTTTACAAAAAGCCGCCGTTAAATACAACATATCGAAAACGGTCCTCTGGCGACGGGTGAAAAAGCATCCGCTCTACATGAAGACCACCCGTGAAAACCCGCTTATAACACAGGCCTGCGAACGTCTGAAAAACGGTGATTCCCTGAAGAGTATCAGTCAAGCACTGGACATCCCGATGTCCACGCTTCACCGTCACAAAGTGCGGTTGGCCCAGGAGGGCCGACTGCCCGAGCATGTAACATTCAAGAAACGCGGTCCATTGTCCAAGGAGATGCTGAAAAAGAAACTCACCAAAGCGGTGGAGGCATGCTCGAGCGGTGGTATGTCACAGAATCATGCGGCGAACGTGTTCGACGTGCCGAAGAGCACACTTTGGCGGCATTTACAAAAGAAAATGTTCACCGGCAACAGTTCAAAGGACATGAACATCAAGGAAGAGGTCGTGTAA
- Protein Sequence
- MNHLKWMGHTATILDIQKSLKDDPDSCDVTLACRGKSVKAHRFVLSSCSDLLHDILSDVPIGQEATIIVPDVRGSLLDCVLSFIYIGETSLSSTNLSEFLEAISILGIKSAISFECANSSSVISGASKNVAEMTEMEEELMEAEPEQEIVEKDDEEDQVVAESSSVRELEFLEVYNEHEKISYTIENITPTNPNEYILTESSGTFTLTPNAKIESNEVTTLVDKPDDDNPIMEHYVADPIGDSSQCSSMDMKDDKCAKKLKDEFSEFQALSPDDSKGYQNFNETQSARVEALENAVLAVVDEGMSLQKAAVKYNISKTVLWRRVKKHPLYMKTTRENPLITQACERLKNGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPEHVTFKKRGPLSKEMLKKKLTKAVEACSSGGMSQNHAANVFDVPKSTLWRHLQKKMFTGNSSKDMNIKEEVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_00688813; iTF_00991672; iTF_00991936;
- 80% Identity
- iTF_00688813;