Basic Information

Gene Symbol
grh
Assembly
GCA_958301585.1
Location
OY284417.1:117569492-117620566[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.17 4.6e+03 -1.8 1.1 5 38 76 106 72 120 0.50
2 3 1.8e-30 4.9e-26 92.9 0.0 24 148 515 634 502 637 0.92
3 3 6.2e-10 1.7e-05 25.8 0.1 169 204 637 671 634 673 0.91

Sequence Information

Coding Sequence
ATGAATAGGAGACGAACAGTGCTGACCAGCCAGACGGACTCGCCGCCACCAACATTGTCATCAGCGCCACAGGCGCTACCCATGTCGCTGGCGACATCGAACAGTCCTGATCAAGTGATTATACAAAATCACAGCTTCTTGCCAACATCGACGGCTTCGAGGTATTTCGAACACCCGCTGAATATATCGCCCGGTCAGAATGGACCCGGCGACGATGACCACCATCAGCAGCAGcaccaacaacagcagcaacagcatcatCAGAATCACCAACAGCAGCAGACGCAACAACACCATCATCTGGTGGCGTCGCCGGGCTCGGTTAATTTAGGCGCGTTGACCAACACGCATCAGGTGCATCAAGTACAGAATCCCAATGGCAGCACGTCGTTTGTATATGAATACTACAAGCTATCGGACAAGGACAATGATGAATTGCACTGGAGTGCCCCCACTACATCAAACAAATTAAACGGACAGACCACACCTCTAGACGTATCTGGCCTATCGCAAAATGAAATACAAGGCCTATTGCTAGGTTCACacccatcatcaacatcatcggcGTCAACTACGACAACATCACAATCATCGGTAGCTGGCGCAGCAACAGCTGTTGTCGTAACCACCGACCAACATcgtcagcaacagcagcaacaactacAGCATCAAACAATTAGCATTAAACGTGAACCGGAGGATCTACGTAAGGATCCGAAATGTGGCAATAACGGTGCGGGTAATACCAACAGTGGCAATGCGAACAACGGCGGCGGTGGACACAGTCAAAAGGTATTAGTTGTACAATCACCGTCGCCATCAATACAAATTAAAGAGCCACCACCCAGTCCTGGAAGTCCAACAAACGAAACAATGTACGCTGCCAGCGGCGGCACTCAAATTTACCTTCAGGGTCCACACCAGACAAGCACTTCCGTAACAGGTGGCACCAATGTGAATACACACAGTCCTAGCCCCGGACCATATATCACACCGGACAATTATGGAATGTACACAACACGTCTTGCCACCGGACCAACATCCACATTCATTTCAGAGCCATATTATCGTGAATATTTCGCTGCCGACGGTCAGGGTGGTTATGCACCCGCAACACGTACCGTCTACGGCGATAGTGATGGACCACAACCAGGTACCACATATGAAGGACGTTTCACAACTACTCATACGAAGAACGGCACGCCGGTTTATGCGAAAACGGTCACGGCAGCCGGTTTGACGGTCGATCTACCAAGTCCCGATTCGGGAATTGGTGCTGATGCTATAACGCCGAGGGATCAAAACAATCTTCAACAGtCGTTCGATTACACAGAACTATGCCAACCAGGTACTCTATTAGACAGTGGCGGTGCAATACCAGTTTCAGTTAGTAGCATGCAACGGACAGTAAGCATTCATGGCGGTCAAAATAGTCCGACAACATCGTTAAGCGGCGCAACAGGGACACCGGGCACAACACGATCAAGGCCATGGCATGATTTCGGACGGCAAAGTGATGCGGATAAGATTCAAATACCAAAAATATTCGTAAATGTAGGATTTAAATACCATCTAGAAAGTCCAATAAGTTCATCGCAACGGCGAGAGGATGATCGAATAACATACATCAACAAGGGACAGTTCTACGGCATCACACTGGAATACATCCCGGATCCGGATAAGCCCATCAAGAACACCACGGTTAAGAGCGTGATCATGCTGATGTTTCGAGAGGAGAAGAGCCCCGAGGATGAAATTAAAGCTTGGCAATTTTGGCACAGTAGACAACATTCTGTCAAACAGAGGATACTAGATGCCGATACGAAAAATTCCGTTGGTCTTGTAGGCTGTATTGAGGAGGTATCTCATAATGCTATCGCTGTCTACTGGAATCCATTGGAAAGTTCTGCTAAGGGTCTACCGCTACATATACAAATCGACACATTCGAGGATCCACGGGATACACAAGTGTTCCATCGAGGCTATTGCCAAATCAAAGTCTTCTGCGATAAGGTAAGTGTAACTCTATAA
Protein Sequence
MNRRRTVLTSQTDSPPPTLSSAPQALPMSLATSNSPDQVIIQNHSFLPTSTASRYFEHPLNISPGQNGPGDDDHHQQQHQQQQQQHHQNHQQQQTQQHHHLVASPGSVNLGALTNTHQVHQVQNPNGSTSFVYEYYKLSDKDNDELHWSAPTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGAATAVVVTTDQHRQQQQQQLQHQTISIKREPEDLRKDPKCGNNGAGNTNSGNANNGGGGHSQKVLVVQSPSPSIQIKEPPPSPGSPTNETMYAASGGTQIYLQGPHQTSTSVTGGTNVNTHSPSPGPYITPDNYGMYTTRLATGPTSTFISEPYYREYFAADGQGGYAPATRTVYGDSDGPQPGTTYEGRFTTTHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNLQQSFDYTELCQPGTLLDSGGAIPVSVSSMQRTVSIHGGQNSPTTSLSGATGTPGTTRSRPWHDFGRQSDADKIQIPKIFVNVGFKYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDPDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKGLPLHIQIDTFEDPRDTQVFHRGYCQIKVFCDKVSVTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00688370;
90% Identity
iTF_01253305;
80% Identity
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