Basic Information

Gene Symbol
grh
Assembly
GCA_951905685.1
Location
OX645064.1:46909827-46945505[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.098 1.3e+03 -0.4 2.6 4 40 84 120 80 138 0.67
2 3 0.87 1.2e+04 -3.5 0.1 79 97 216 234 199 243 0.48
3 3 4.7e-11 6.3e-07 30.0 0.0 24 66 486 528 471 552 0.83

Sequence Information

Coding Sequence
ATGATGCTGCAGATGCAAGAGCAAATCTCTAGGAGACGAACTGTGCTGACCAGCCAAACGGACTCGCCCCCGCCAACACTGCCATCAGCGCCACAGGCGCTACCCATGTCGCTGGCGACATCGAACAGTCCCGATCAAGTGATTATACAAAATCACAATTTCTTGCCAACATCGACAGCTTCAAGATATTTCGAACACCCGCTGAATATATCACCCGGCCAGAATGGACCCGGCGACGATGAccatcatcaacaacaacaacaacagcagcagcaacaccatcaacagcaacaacatcatCAGAATCACCAACAACAGACGCAACAACACCATCATCTGATCGCGTCGCCGGGCTCCGTAAATTTGGGCGCATTGACCAACACGCATCAGGTGCATCAAGTGCAGAATGCCAATGGTAGCACATCGTTCGTTTATGAATACTACAAACTATCGGACAAGGACAATGATGAATTGCACTGGAGTGCCCCCACTACGTCAAACAAATTAAACGGACAGACCACACCTCTAGATGTATCTGGCCTATCGCAAAATGAAATACAAGGCCTATTGCTAGGTTCACAcccatcatcaacatcatcggCGTCAACTACGACAACATCACAATCATCGGTAGCTGGCGCAGCAACGGCTGTTGTCGTAACCACCGATCAACATcgtcagcaacagcaacaacagcatcaAACAATTAGCATTAAACGTGAACCGGAGGATCTGCGCAAGGATCCAAAATGTGGTAATAACGGTGCGGGTAACAGCAACAGTGGCAATGCGAACAACGGCGGCGCTGGACACAGTCAAAAGGGTCCACACCAGACAAACACTTCTGTAACAGGTGGCAACAATGTGAATGCACACAGTCCTAGCCCCGGACCATATATCACATCGGACAATTATGGAATGTACACAACACGCCTTGCCACCGGACCAACATCCACATTCATTTCAGAGCCATACTATCGTGAATATTTCGCTTCCGATGGCCAGGGCGGCTACGCACCCGCAACACGTACCGTCTACGGCGATAGTAATGATGGACCACAACCGGGCACCACATATGAAGGACGTTTCACAACCACTCATACGAAGAATGGCACGCCAGTTTATGCGAAAACGGTTACGGCAGCTGGTTTAACAGTCGATCTACCAAGTCCCGATTCGGGAATTGGTGCTGATGCTATAACGCCGAGGGATCAAAACAATCTTCAACAGTCGTTCGATTACACGGAACTATGCCAACCGGGTACACTATTGGACAGTGGCGGTGCAATACCAGTTTCAGTTAGTAGTATGCAACGAACCGTTAGCATTCATGGCGGTCAAAATAGTCCGACAACATCGTTAAGCGGCACAACAGGGACACCGGGCACAACACGATCAAGGCCATGGCATGATTTCGGACGGCAAAGTGATGCGGATAAAATTCAAATACCAAAAATATTCGTAAATGTAGGATTTAAATACCATCTAGAAAGTCCAATCAGTTCGTCGCAGCGGCGAGAAGACGACCGAATAACATACATCAATAAGGGACAGTTCTATGGCATCACATTGGAGTACATTCCGGATCCAGATAAACCCATCAAGAATACCACGGTTAAGCACTTTTCAGCGCTCGATATGGAAATGAAGCGTGAACGAATGGAGTGA
Protein Sequence
MMLQMQEQISRRRTVLTSQTDSPPPTLPSAPQALPMSLATSNSPDQVIIQNHNFLPTSTASRYFEHPLNISPGQNGPGDDDHHQQQQQQQQQHHQQQQHHQNHQQQTQQHHHLIASPGSVNLGALTNTHQVHQVQNANGSTSFVYEYYKLSDKDNDELHWSAPTTSNKLNGQTTPLDVSGLSQNEIQGLLLGSHPSSTSSASTTTTSQSSVAGAATAVVVTTDQHRQQQQQQHQTISIKREPEDLRKDPKCGNNGAGNSNSGNANNGGAGHSQKGPHQTNTSVTGGNNVNAHSPSPGPYITSDNYGMYTTRLATGPTSTFISEPYYREYFASDGQGGYAPATRTVYGDSNDGPQPGTTYEGRFTTTHTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNLQQSFDYTELCQPGTLLDSGGAIPVSVSSMQRTVSIHGGQNSPTTSLSGTTGTPGTTRSRPWHDFGRQSDADKIQIPKIFVNVGFKYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDPDKPIKNTTVKHFSALDMEMKRERME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00991525; iTF_01253305;
90% Identity
-
80% Identity
-