Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000542.1:805777-807561[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.018 2.1 12.4 2.1 1 23 2 25 2 25 0.96

2 18 0.33 38 8.4 5.0 1 23 92 115 92 115 0.97

3 18 0.0055 0.64 14.0 1.4 1 23 121 144 121 144 0.96

4 18 0.0068 0.79 13.7 3.4 1 23 150 173 150 173 0.98

5 18 0.00039 0.046 17.6 0.5 1 23 179 202 179 202 0.98

6 18 0.0021 0.25 15.3 0.2 1 23 208 231 208 231 0.96

7 18 8.1e-05 0.0094 19.8 0.6 1 23 237 260 237 260 0.98

8 18 0.022 2.6 12.1 3.4 1 23 266 289 266 289 0.98

9 18 0.18 21 9.2 2.8 1 23 295 318 295 318 0.98

10 18 0.00098 0.11 16.4 1.3 1 23 324 347 324 347 0.98

11 18 2.8e-05 0.0032 21.2 2.5 1 23 353 376 353 376 0.98

12 18 0.012 1.4 13.0 3.3 1 23 382 405 382 405 0.98

13 18 0.0019 0.22 15.5 2.4 1 23 411 434 411 434 0.96

14 18 0.0019 0.22 15.5 1.9 1 23 440 463 440 463 0.98

15 18 0.0028 0.32 15.0 2.0 1 23 469 492 469 492 0.97

16 18 0.00046 0.054 17.4 1.0 1 23 498 521 498 521 0.98

17 18 0.00055 0.064 17.2 2.6 1 23 527 550 527 550 0.98

18 18 0.32 37 8.5 2.2 1 23 556 579 556 579 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.018	2.1	12.4	2.1	1	23	2	25	2	25	0.96
2	18	0.33	38	8.4	5.0	1	23	92	115	92	115	0.97
3	18	0.0055	0.64	14.0	1.4	1	23	121	144	121	144	0.96
4	18	0.0068	0.79	13.7	3.4	1	23	150	173	150	173	0.98
5	18	0.00039	0.046	17.6	0.5	1	23	179	202	179	202	0.98
6	18	0.0021	0.25	15.3	0.2	1	23	208	231	208	231	0.96
7	18	8.1e-05	0.0094	19.8	0.6	1	23	237	260	237	260	0.98
8	18	0.022	2.6	12.1	3.4	1	23	266	289	266	289	0.98
9	18	0.18	21	9.2	2.8	1	23	295	318	295	318	0.98
10	18	0.00098	0.11	16.4	1.3	1	23	324	347	324	347	0.98
11	18	2.8e-05	0.0032	21.2	2.5	1	23	353	376	353	376	0.98
12	18	0.012	1.4	13.0	3.3	1	23	382	405	382	405	0.98
13	18	0.0019	0.22	15.5	2.4	1	23	411	434	411	434	0.96
14	18	0.0019	0.22	15.5	1.9	1	23	440	463	440	463	0.98
15	18	0.0028	0.32	15.0	2.0	1	23	469	492	469	492	0.97
16	18	0.00046	0.054	17.4	1.0	1	23	498	521	498	521	0.98
17	18	0.00055	0.064	17.2	2.6	1	23	527	550	527	550	0.98
18	18	0.32	37	8.5	2.2	1	23	556	579	556	579	0.94

Sequence Information

Coding Sequence: ATGTACAAGTGTGGATTTTGTCGCAGAAGATACAAGGCGAGAAAATCTCTTGAGACGCATATGGTAAGAATGCATGCTGATAGTGCAGGAAGAGATGTCCAAAATTACTCTACGTGTGACTATTTCAAAGTTAATGTTAAAAATATGAAAGGGAAATCTGCACAATCATATGCTGGTGAAAAACAATGTCAATCATCGAAATACAAATTTCAAACACGGACCAAATGTCACTTAAAATCACAGATAAAAATAAAATATCCCAACAGAGGCAAATATAAGTGCGCACATTGCGAGTTTAAGACATATTACAGGTCTTATTTAGAAATGCACACGAAAATGAAACATCTCATGGAAAGTTATTATAAATGCAAGGAGTGTCAATACCAGACGAACTTCAAGTCAAGTTTGGAAGTACACACAAAGGCAATACATCTGAAGCAAAAGGCTTATAAATGCGCAGAATGTGAATTCAATACAAATAACAGGTCACATTTAAAATTACACGTGAAAACGAAACATCTTAAAGAATTTAATTATAAATGTGGAGAGTGTGAATACAGGACAAATAGGAAGTTAAATTTAGAAATACACATAAAAACAATACATCTTAAAGAACACGATTATAAATGTGCCGAGTGTGAATACAAGACAAACCGGAAGGGTGGTTTAGCAAAACACATTAAGGCAATACATCTTAAAATAAGAGATTATGTATGCGCAGAATGTGAATACAAAACAAACAGTAAGTATAATTTAGAAAAACACATAAAGACAATACATCTTAAAGTCGCCAATTATAAATGCGCAGAATGTGAATACAAAACAAACGAGAAGTATTGTTTGGAGAATCACATAAAGACAAAGCATCTTAAAATAAGAAATTATAAATGCGCAGAGTGTGAGTATAATACTAACCACGTTCTTTGTTTAGAAAGACACATTAAGACAGTACATCTTAAAATATGCGACTATAAATGCGCAGAGTGTGAATTCATGACAAATTACAAGTCGGGCTTAGTAAAGCACATGAAAACAAAACATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAGTAGGAATAGTTATTTAAAAGCACACATAAAGACGAAACATCTTAAAGAATATGATTATAAATGCACAGAGTGTGAATACGAGACAAATCACAAGCAAGGATTCGAAAATCACATAAAGACAAAGCATCTTAAAGTAATTGATTATAAATGCATGGAGTGTGAATTCAAGACAAATCGCAAGTCACACTTAGAAAGACACGTCAAAGCAATTCACCTGAAACAAAAGGATTATATATGCGGAGAGTGTGAATACAAGACAAGCCAAAAGTCATGTTTAGATAAACACATAAAGACCATACATCTTAAAGTAACCAATTATAATTGTACAGAGTGTGAATACAAGACAAACCACAAGCCAAATTTAGAAAAACACGTAAAATCAATACATCTTAAGGAATACGATTATAAATGCACAGAGTGTGAATTCAAGACAGGCAGTAAGTCATATTTACAAGTGCACATAAAAACGATACATCTTAAAATAAGCGATTATAAATGCATGGAGTGTGAATACAAGACAAACTTCAAGTCTAGTTTAAAAAAACACATAAAGACGATCCATCTTAAAATAAGCGATCATGAATGTGCAGCGTGTGAATACAAAACAAATTACAAATCTAGTTTAGAAAAGCACAGAAAGGCAAAACATTCTAAAGAAGGCAATTATAACGGTACCGGTTGGGAGTACACGACGTAA
Protein Sequence: MYKCGFCRRRYKARKSLETHMVRMHADSAGRDVQNYSTCDYFKVNVKNMKGKSAQSYAGEKQCQSSKYKFQTRTKCHLKSQIKIKYPNRGKYKCAHCEFKTYYRSYLEMHTKMKHLMESYYKCKECQYQTNFKSSLEVHTKAIHLKQKAYKCAECEFNTNNRSHLKLHVKTKHLKEFNYKCGECEYRTNRKLNLEIHIKTIHLKEHDYKCAECEYKTNRKGGLAKHIKAIHLKIRDYVCAECEYKTNSKYNLEKHIKTIHLKVANYKCAECEYKTNEKYCLENHIKTKHLKIRNYKCAECEYNTNHVLCLERHIKTVHLKICDYKCAECEFMTNYKSGLVKHMKTKHLKEHDYKCTECEYKTSRNSYLKAHIKTKHLKEYDYKCTECEYETNHKQGFENHIKTKHLKVIDYKCMECEFKTNRKSHLERHVKAIHLKQKDYICGECEYKTSQKSCLDKHIKTIHLKVTNYNCTECEYKTNHKPNLEKHVKSIHLKEYDYKCTECEFKTGSKSYLQVHIKTIHLKISDYKCMECEYKTNFKSSLKKHIKTIHLKISDHECAACEYKTNYKSSLEKHRKAKHSKEGNYNGTGWEYTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00989828;
90% Identity: -
80% Identity: -