Basic Information

Insect: Melolontha melolontha
Gene Symbol: -
Assembly: GCA_935421255.1
Location: CAKXYX010000534.1:272059-273720[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0032 0.38 14.7 3.8 1 23 30 53 30 53 0.96

2 17 0.12 14 9.8 6.9 1 23 91 114 91 114 0.95

3 17 0.12 14 9.8 3.8 1 23 120 143 120 143 0.98

4 17 2.8 3.3e+02 5.5 1.0 10 23 154 168 152 168 0.90

5 17 5e-06 0.00059 23.6 0.8 1 23 174 197 174 197 0.96

6 17 0.0011 0.12 16.3 4.4 1 23 203 226 203 226 0.98

7 17 0.00047 0.055 17.4 1.1 1 23 232 255 232 255 0.98

8 17 0.0037 0.43 14.5 3.9 1 23 261 284 261 284 0.98

9 17 4.1e-05 0.0047 20.7 1.9 1 23 290 313 290 313 0.98

10 17 0.0022 0.26 15.3 0.5 1 23 318 341 318 341 0.97

11 17 0.0004 0.046 17.6 3.4 1 23 347 370 347 370 0.98

12 17 1.8e-05 0.0021 21.8 2.1 1 23 376 399 376 399 0.98

13 17 0.0022 0.26 15.3 0.5 1 23 405 428 405 428 0.97

14 17 0.00017 0.02 18.8 1.5 1 23 434 457 434 457 0.98

15 17 0.0012 0.14 16.1 2.7 1 23 463 485 463 485 0.99

16 17 0.0016 0.19 15.7 1.3 1 23 491 514 491 514 0.98

17 17 0.0025 0.29 15.1 1.5 1 23 520 543 520 543 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0032	0.38	14.7	3.8	1	23	30	53	30	53	0.96
2	17	0.12	14	9.8	6.9	1	23	91	114	91	114	0.95
3	17	0.12	14	9.8	3.8	1	23	120	143	120	143	0.98
4	17	2.8	3.3e+02	5.5	1.0	10	23	154	168	152	168	0.90
5	17	5e-06	0.00059	23.6	0.8	1	23	174	197	174	197	0.96
6	17	0.0011	0.12	16.3	4.4	1	23	203	226	203	226	0.98
7	17	0.00047	0.055	17.4	1.1	1	23	232	255	232	255	0.98
8	17	0.0037	0.43	14.5	3.9	1	23	261	284	261	284	0.98
9	17	4.1e-05	0.0047	20.7	1.9	1	23	290	313	290	313	0.98
10	17	0.0022	0.26	15.3	0.5	1	23	318	341	318	341	0.97
11	17	0.0004	0.046	17.6	3.4	1	23	347	370	347	370	0.98
12	17	1.8e-05	0.0021	21.8	2.1	1	23	376	399	376	399	0.98
13	17	0.0022	0.26	15.3	0.5	1	23	405	428	405	428	0.97
14	17	0.00017	0.02	18.8	1.5	1	23	434	457	434	457	0.98
15	17	0.0012	0.14	16.1	2.7	1	23	463	485	463	485	0.99
16	17	0.0016	0.19	15.7	1.3	1	23	491	514	491	514	0.98
17	17	0.0025	0.29	15.1	1.5	1	23	520	543	520	543	0.97

Sequence Information

Coding Sequence: ATGTACAAATGTACACAATGCAAGTTCAGAACAAAATACCATGTCGACTTCAGGCACCATTCCAATGAACATTACCATGTGAAAATGTACAAATGTAGAATTTGTCACAGGAGATACAATACGAACATATCTCTCAAGACGCACGTGGAAAAAACTCATGTTGATAATGTAAGAAGAAATGTCCAAGAATACTCTTTGTGTGATTATTTCAAAACTAATATTAAACATATACAAGAGGGATCTACACATTCAGAAGGCGGTGAAAAACAATATTTATGCCCGAAATGTAAATTTCAAACAAGGAACAAATGTCACTTAAAATCACATATAAAAGTCAAACATCTGAGCAGACGCAAATATAAGTGCGCAAATTGCGAGTTTAAGACATATTACAGGACTTATTTAAAAATGCACATGAAAATGAAACATCTCATGGAAAATGATTATAACTGCTTCAAGACAAAGAACAAATCAAATTTAAACACACACGTAAAAAGAAAACATCTCAAAGTAACCGATTATAAATGCCCAGACTGTGAATACAAAACAAATGACAAGTCAAATTTAAAAAAACACATAAAGGGCATACATTTTAAACAACACGATTATAAATGTTCAGAGTGTGAATACAAGACATATCATACGTCAACTTTAAAAAGACACATAAAGACAATTCATTTGAAAGAACATGATTATAAATGCGAAGAGTGTGAATTTAAGACAAATGACAGGACAGGTTTAAAAAAACACATAAAGACAATACATCTTAAAGTAAGCGATTATAAATGCACAAGCTGTGAATACAAGACAAATTACAAGACAAGTTTAAAGAAGCACATAAAGACAATGCATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATATAAGACAAGTGTCAAAACAAATTTAAAAAGACACATAAAGACAATACATAAAGAACACGGTTATAATTGTGTAGAGTGTGAATATAAGACAAATGAAAAGGCAAATTTAAAAACACACATCAAGACAATACATCTTAAAGTATGCGATTACAAGTGTACAGAGTGTGAATACAAGACAAATTACAAGACAAGTTTAAAGAAGCACATAAAGACAATGCATCTTAAAGAACACGATTATAAATGCACAGAGTGTGAATACAAGACAAATGACAAAACAAATTTAAAAAGACACATAAAGACAATACATTTTAAAGAACACGGTTATAATTGTGTAGAGTGTGAATATAAGACAAATGAAAAGGCAAATTTAAAAACACACATCAAGACAATACATCTTAAAGTATGCGATTACAAGTGTACAGAGTGTGAATACAAGACAAATTACAAGATAAATTTAGAAAAACACATAAAAACAATACATCTTAAAGTAAGCGATTATAAGTGTGCAGAGTGTGAATACAAGACAAATTACAAGTCAAATTTCAAAACCCACCTAAAAATACATCTGAAAGTAAGCGATTATAAATGCACAAGCTGTGAATACAAGGCAAATTACAAGATAAATTTAGAAAGACACATGAAGACAATACATCTTAAAGAACATGATTTTAAATGCATAGAGTGTGAATACAAGACAAATGACAAGCAAAATTTAAAAAGACACATAAAGACAATACATCTTAAAGAAAATTATTTTAAATGCAGAGTGTGA
Protein Sequence: MYKCTQCKFRTKYHVDFRHHSNEHYHVKMYKCRICHRRYNTNISLKTHVEKTHVDNVRRNVQEYSLCDYFKTNIKHIQEGSTHSEGGEKQYLCPKCKFQTRNKCHLKSHIKVKHLSRRKYKCANCEFKTYYRTYLKMHMKMKHLMENDYNCFKTKNKSNLNTHVKRKHLKVTDYKCPDCEYKTNDKSNLKKHIKGIHFKQHDYKCSECEYKTYHTSTLKRHIKTIHLKEHDYKCEECEFKTNDRTGLKKHIKTIHLKVSDYKCTSCEYKTNYKTSLKKHIKTMHLKEHDYKCTECEYKTSVKTNLKRHIKTIHKEHGYNCVECEYKTNEKANLKTHIKTIHLKVCDYKCTECEYKTNYKTSLKKHIKTMHLKEHDYKCTECEYKTNDKTNLKRHIKTIHFKEHGYNCVECEYKTNEKANLKTHIKTIHLKVCDYKCTECEYKTNYKINLEKHIKTIHLKVSDYKCAECEYKTNYKSNFKTHLKIHLKVSDYKCTSCEYKANYKINLERHMKTIHLKEHDFKCIECEYKTNDKQNLKRHIKTIHLKENYFKCRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00989845;
90% Identity: -
80% Identity: -