Mmel058807.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- egg
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000492.1:621582-623980[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-16 1.4e-11 47.3 0.0 5 75 72 135 69 137 0.91 2 3 0.34 2.5e+04 -1.6 0.0 36 45 226 235 222 241 0.90 3 3 0.32 2.3e+04 -1.5 0.0 36 45 282 291 275 297 0.90
Sequence Information
- Coding Sequence
- ATGATATATTTTTTTCTTTGTCGCTATACAAAACTAAGATTGACAAAAGACAAAACTAAGAAGGCATGCTTTTTTAACATTTTTGTTATTCTATATTTTCAGTATTATACACCAAGAAGACAAAAACCGAAAACCAATGTCTACACTCCTCATTCTTGTAATCCCAAATGCAAAGACTTTATGTACTGTTCTTTATCAAGACTCAAGGGCTATAGCCCTCTCTCTAAACCGCTACTATGCGGTTTTTATAGACTTATGTATAAAGCCAAGAATAAAAAGTCAGTATTGTATAAAGCACCCTGTGGAAGAACTTTACGAAGCATGCAAGAAGTACATATGTATCTTCGAATTTCGAAGTCGGACCTGACTGTGGATTTGTTTGATTTTAATGTTTACGTACGCTGCCTAGCTGAATTTATGGTGGAACAGAAGAACATACTCGTAAAGGATTTGTCGCAAGGTAAAGAAGAATGTCCAATTACAGTCGTAAATTATGTTAATTCGTCAACATTAAATTTCTGTAATTATTCAACAAAAAGAGAACCTGTGGAAGATGTTGCATTAAATACCAGCACCGATTTCTTAACGGGTTGTGATTGTACAGATGATTGTATCGTAAGTATTATTTTTTCCTTAGACGTAGATACGTATTTCGCCTTTCTACAGGCTCATCGGTACGCCCCTGCTGGAGAAAGGATATCTTCAGACACATTCATAAAAAAGAACCACATCGCCACATCACAGAAATTATCCGGACCGAGCTTAGAAGTAAATTCAGCGCTGCCTGTTGTCAGACAGCCGAAAGACGTAGATACGTATTTCGCCTTTCTACAGGCTCATCGGTACGCCCCTGCTGGAGAAAGGATATCTTCAGACACATTCATAAAAAAAAAAGGGCGTCGTTACTTCACATTGCAGGGGCGTACCGATGAGCCTGTAGAAAGGCGAAATACGTATCTACGTCTCTGGGGAGGAATATGTTTCGACACGTTCACAAAAATATTAATATTCACGCTTCAAGAAAGAGTTTTTTTTGTTACGTCGTATCTTCGTACGAACGCGGATTACGAAATTATGTTTACCGAATTTCAACAACAATTTCCGAACTCGCCGCTACCAAATCGTTCAACAGTGTGGAAGATGTACCAGAAATTCTTAAAAACGGGCTCTGTTGCCGACGCGCCGCGTTCTGGACGACCGGTATCTGTAACAACTAACGAAAATATGGAAACAGTGGCACTGGCGTTTGTCGAGCAGCCGAACCAATCTGCAGTGCGGCTATCGGGAGAACTTCAAATATCCGATCGTTCTTTACGACGAATGCTGAAACGCTGA
- Protein Sequence
- MIYFFLCRYTKLRLTKDKTKKACFFNIFVILYFQYYTPRRQKPKTNVYTPHSCNPKCKDFMYCSLSRLKGYSPLSKPLLCGFYRLMYKAKNKKSVLYKAPCGRTLRSMQEVHMYLRISKSDLTVDLFDFNVYVRCLAEFMVEQKNILVKDLSQGKEECPITVVNYVNSSTLNFCNYSTKREPVEDVALNTSTDFLTGCDCTDDCIVSIIFSLDVDTYFAFLQAHRYAPAGERISSDTFIKKNHIATSQKLSGPSLEVNSALPVVRQPKDVDTYFAFLQAHRYAPAGERISSDTFIKKKGRRYFTLQGRTDEPVERRNTYLRLWGGICFDTFTKILIFTLQERVFFVTSYLRTNADYEIMFTEFQQQFPNSPLPNRSTVWKMYQKFLKTGSVADAPRSGRPVSVTTNENMETVALAFVEQPNQSAVRLSGELQISDRSLRRMLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -