Mmel186527.2
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010003574.1:43445-45371[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-08 8.9e-06 28.8 0.0 4 41 17 54 14 57 0.90
Sequence Information
- Coding Sequence
- ATGGCATCTAAAGTAAAAGGGAAGGCCAGACAGGCGTGGGATAAAAGTGCAATGGCAGATGCAATTAAAGCTGTACGAGAAAAGACAATGGGCTTTTTAAAAGTATCGAAAACATACGGAGTACCCAAAACTACACTTTTACGATTAACAAAAACAGAAAATGAATCACTTTGTGATATAACTAACCTCAAACTTGGCAGAAAATCGACGTTACCTACTgaattggaggatgagctatctaattatattttagaaatggaaaaatcaggatttggtctaacacgcagggacataagatctttggcttaccagttagcgaagaaaaacaacatagagcactggttttcagaagctaaagaatctgcaggcagaacatggttgaggttattcctcaagcgccatcctaacctatcatttcgccgtccaacgggtacatcaatatcaagaatgaaaggttttaacaaagaaaattatcctgcgactaatgtttataacgtggacgaaactggtatttcagtcgtgccatcaaaaatgccgtcgatattggcacttaagggcaaaaaacaaattggaactgcaacttcagcagaacgtggatcaacaattacttgtgtcatatgtatgagtgcaggtggcacatttatcccaccaatgttgatatttccaagaaaacgggataatccattactgatgaaaggtgctccacctggttctattcatgcctgtcatccatcagggtggatacaattagaactatttactcagtggttcgagcactttttacagcacgtgaaaccaactgctacatcgccggttctccttattttagatggccatgctagtcacactcgtaacatcaaggtggtggatttagcaagaaaaaatcacgttagcttattgtcgctgcccccacactctagtcataaaatacagccgcttgataaaacatttatgggtccattaaaaaagtacttgacagaagaaattcgtaagcgggtacgaatgcaaccacaagcagtgacacattatgacatagctgaattatttggtaaagcctacataagagctcagcaaatgtcttCGAAGATTATGACTATTGACGACGACTGTCCAGTAGTAGAAGAATCTGTTAATGATCCACCACGTGATAGGATAACACCAGTTATTGAAAATGGTGATAACAATTTTCCTGAGGCAGATGCTGTTGAAGCTCTGGAAGCCCACTCCACACCTATTTCTACTCTGACATTTGACGAAAGTCACCTTCCAAATCTACAATCTAAGGAACCGACAACCACCTTGAATGATTCAGTGGCTGGTTCCTCCACATCAGCTAGAATATATTTGTCACCAAAAGTGTTGCAACCCATACCACGTTTGAAGAAAACTGTCAGTAATAGAGGAAGAAAGGCCACAAAATCAGTGATTTTGACATCTTCACCTTATAAGCGAGATTTAGAAACATCGATAAAAAGGAAGGAGGAATCAGATAAATTAAAGAAAAAGAGACCTGACTATTTAGTTGATGATAGCACAGACGAGAGTCCCGACCGCTCTCAAAATGAAAACGCCAAATGCTTGTATTGTCATTGGCTTTTTTCTGAAGATGTTCATGGAGAGAAATGGATCCAATGCGCTTTTTGTAAGCGATGGGCTCATGAAGATTGTGCTGGCATAGAAGATGTGGTCGACTTCTATGTTTGCGAATTTTGTACCAATTATTCATCTAAGCCCTGA
- Protein Sequence
- MASKVKGKARQAWDKSAMADAIKAVREKTMGFLKVSKTYGVPKTTLLRLTKTENESLCDITNLKLGRKSTLPTELEDELSNYILEMEKSGFGLTRRDIRSLAYQLAKKNNIEHWFSEAKESAGRTWLRLFLKRHPNLSFRRPTGTSISRMKGFNKENYPATNVYNVDETGISVVPSKMPSILALKGKKQIGTATSAERGSTITCVICMSAGGTFIPPMLIFPRKRDNPLLMKGAPPGSIHACHPSGWIQLELFTQWFEHFLQHVKPTATSPVLLILDGHASHTRNIKVVDLARKNHVSLLSLPPHSSHKIQPLDKTFMGPLKKYLTEEIRKRVRMQPQAVTHYDIAELFGKAYIRAQQMSSKIMTIDDDCPVVEESVNDPPRDRITPVIENGDNNFPEADAVEALEAHSTPISTLTFDESHLPNLQSKEPTTTLNDSVAGSSTSARIYLSPKVLQPIPRLKKTVSNRGRKATKSVILTSSPYKRDLETSIKRKEESDKLKKKRPDYLVDDSTDESPDRSQNENAKCLYCHWLFSEDVHGEKWIQCAFCKRWAHEDCAGIEDVVDFYVCEFCTNYSSKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00987779;
- 90% Identity
- -
- 80% Identity
- -