Mmel178668.2
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010002748.1:48764-50650[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7e-08 1.9e-05 27.8 0.1 17 37 30 50 15 56 0.81
Sequence Information
- Coding Sequence
- ATGCCAAGAAGTAAATTAAACAAAAAAAGGATTAAACCAGATGAAAAAAATGTTACTGCTGCAGCCCGCTTAGCTTTAGAAAATAATTTCAGCGTTCGGCAAGCTGCTGACCACTATGGAATATCAAAATCTACTCTTTCAAGACATATTCTTAAGCGTAAAGCAAGCGGAGGCCAAGAATTTATTTACAATAGATTAATTCCACAGACCCCATCTAATTCGGAAGAGCAGCCTCAACCTGGACCATCAAGGGAACATCACACACCAGAGCAAGTACGACCATATCCAAAGGCTCAACCAAGGAAGGAAGGTAAAAGAGGGGGTAGGAAACCAGGAAGTTTCCGAATTGTTACTGACACTCCAGAAAAAAATGAAGTTGAAATGCAGGCACAAATGAAAAATAAGACAAAGAAGAAAGATTTAGCTATTAAGAAAAAGAAGGTTAAGAAAATTTTAAAATACAGCAGTTCTGAGAGTAGTTCAGAAGACGAATTGCTGGAAGATACAGATGATTCTCTAGAAGACATTGAATTTGGAGAAGCAGAGATAGAAACAAATAATGAGACCGAACAACTTAAGATTGGCGACTATATTTTAGCAAAATTAGAAACCAAAAGAATAAGAAAATATTACGTTGCTATAATCACAGGCATTGATGACGATACTTTTAATGTAAAATATTATAAAAAACATAAATTAACACATAAATTTGCGATTGGCGACAATATAAAGTACGAATTGCCAAAGAGCGATGCCATAATTACACTTGGCAAACCACAAGTAGTTGCAGGTACTGCGAGACAAAATGAGGAGCTTAAATTTGAAATAGACATATCAGCTTATAATGTAGAATAG
- Protein Sequence
- MPRSKLNKKRIKPDEKNVTAAARLALENNFSVRQAADHYGISKSTLSRHILKRKASGGQEFIYNRLIPQTPSNSEEQPQPGPSREHHTPEQVRPYPKAQPRKEGKRGGRKPGSFRIVTDTPEKNEVEMQAQMKNKTKKKDLAIKKKKVKKILKYSSSESSSEDELLEDTDDSLEDIEFGEAEIETNNETEQLKIGDYILAKLETKRIRKYYVAIITGIDDDTFNVKYYKKHKLTHKFAIGDNIKYELPKSDAIITLGKPQVVAGTARQNEELKFEIDISAYNVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00987931; iTF_00987916; iTF_00988204; iTF_00987958; iTF_00987960; iTF_00987933; iTF_00987967;
- 90% Identity
- iTF_00987931;
- 80% Identity
- -