Mmel048494.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000398.1:218069-219963[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-09 5.7e-07 32.6 0.1 6 39 19 52 14 56 0.88
Sequence Information
- Coding Sequence
- ATGCCAAGAAGTAAATTAAACAAAAAAAGGATTAAACCAGATGAAAAAAATGTTACTGCTGCAGCCCGCTTAGTTTTAGAAAATAATTTCAGCGTTCGGCAAGCTGCTGACCACTATGGAATATCAAAATCTACTCTTTCAAGACATATTCATAAGCATAAAGCAAGCGGAGGCGAAGAATTTATTTACAATAGATTAATTCCACAGACCCCATTTAATTCGGAAGAGCAGCCTCAACCTGGACCATCAAGGGAACATCACACACCAGAGCAAGTACGACCATATCCAAAGGCTCAACCAAGGAAGGAAGTTAAAATGCAGGCACAAATGAAAAATAAGACAAAGAAGAAAGAATTAGCTATTAAGAAAAAGAAGGTTAAGAAAATTTTAAAATACAGCAGTTCTGAGAGTAGTTCAGGAGACGAATTGCTGGAAGATACAGATGATTCTCTAGAAGACATTGAATTTGGAGAAGTAGAGATAGAAACAAATAATGAGACCGAACAACTTAAGATTGGCGACTATATTTTAGCAAAATTAGAAACCAAAAGAATAAGAAAATATTACGTTGCTATAATCACAGGCATTGATGACGATACTTTTAATTACGAATTGCCAAAGAGCGATGCCATAATTACACTTGGCAAACCACAAGTAGTTGCAGGTACTGCGAGACGAAATGAGGAGCTTAAATTTGAAATAGACATATCAGCTTATAATGTAGAATAG
- Protein Sequence
- MPRSKLNKKRIKPDEKNVTAAARLVLENNFSVRQAADHYGISKSTLSRHIHKHKASGGEEFIYNRLIPQTPFNSEEQPQPGPSREHHTPEQVRPYPKAQPRKEVKMQAQMKNKTKKKELAIKKKKVKKILKYSSSESSSGDELLEDTDDSLEDIEFGEVEIETNNETEQLKIGDYILAKLETKRIRKYYVAIITGIDDDTFNYELPKSDAIITLGKPQVVAGTARRNEELKFEIDISAYNVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00988008;
- 90% Identity
- iTF_00987958;
- 80% Identity
- -