Mmel055779.1
Basic Information
- Insect
- Melolontha melolontha
- Gene Symbol
- -
- Assembly
- GCA_935421255.1
- Location
- CAKXYX010000467.1:725977-727905[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-10 2.2e-07 34.0 0.0 4 39 17 52 14 57 0.91 2 2 8.7 2.3e+03 1.9 0.0 21 29 354 362 352 363 0.87
Sequence Information
- Coding Sequence
- ATGGCATCTAAAGTAAAAGGGAAGGCCAGACAGGCGTGGGATAAAAGTGCAATGGCAGATGCACTTAAAGCTGTACGAGAAAAGACAATGGGCTTTTTAAAAGCATCGAAAACATACGGAGTACCCAAAACTACACTTTTACGATTAACAAAAACAGAAAATAAATCACTTTGTGATATAACTAACCTCAAACTTGGCAGAAAATCGACGTTACCTACTgaattggaggatgagctatctaattatattttagaaatggaaaaatcaggatttggtctaacacgcagggacataagatctttggcttaccagttagcgaagaaaaacaacatagagcactctttttcagaagctaaagaatctgcaggcagaacatggttgaggttattcctcaagcgccatcctaacctatcatttcgccgtccaacgggtacatcaacatcaagaatgaaaggtttcaacaaagaaaatgtaaatgcattttttgacttattagagagttgtatgaatgaattccagtattctgcgactaatgtttataacgtggacgaaactggtatttcaatcgtgccatcaaaaatgccggagatattggctcttaagggcaaaaaacaaattggaactgcaacttcagcagaacgtggatcaacaattacttgtgtcatatgtatgagtgcaggtggcacatttatcccaccaatgttgatatttccaagaaaacgggataatccattactgatgaaaggtgctccgcctggttctattcatgcctgtcatccatcaagatggatacaattccaactatttactcagtggttcgagcactttttacagcacgtgaaaccaactgctacatcgccggttctccttgttttagatggccatgctagtcacactcgtaacatcaaggtggtggatttagcaagaaaaaatcacgttagcttattgtcgctgcccccacactctagtcataaaatacagccgcttgataaaacatttatgggtccattaaaaaagtacttgacagaagaaattcgtaagcgggtacgaatgcaaccacaagcagcgacacattatgacatagctgaattatttggtcaagcctacataagagctcagcgtgcagaactggctataaatggttttcgtgcgactggaatatattcaattaacagaaatgtcttcgaagattatgactttattgACGACGACTGTCCAGTAGTAGAAGAATCTGTTAATGATCCACCACGTGATAGGATAACACCAGTTATTGAAAATGGTGATAACAATTTTCCTGCGGCCCTTGAAGCTCTGGAAGCCCACTCCACACCTATTTCTACTCTGACATTTGATGAAAGTCACCTTCCAAATCTACAATCCAAGGAACCGACAACCACCTTGAATGATTCAGTGGCTGGTTCCTCCACATCAGCTAGAATATATTTGTCACCAAAAGTGTTGCAACCCATACCACGTTTGAAGAAAACTGTCAGTAATAGAGGAAGAAAGGCCACAAAATCAGTGATTTTGACATCTTCACCTTATAAGCGAGATTTAGAAACATCGATAAAAAGGAAGGAGGAATCAGATAAATTAAAGAAAAAGAGACCGTTGAACATTAAAAATAAATCAAAGAAAGCACCAAAGAAAAAAAGCATCATCTCAAAATATAAAGATTCATCTTCTGAAACTTCTAATCAGAGTGACTATTTAGTTGATGATAGCACAGACGAGAGTCCCGACCGCTCTCAAAATGAAAACGCCAAATGCTTGTATTGTCATGGGCTTTTTTCTGAAGATGTTCATGGAGAGAAATGGATCCAATGTGCTTCTTGTAGGCGATGGGCTCATGAAGATTGTGCTGGCATAGAAGATGTGGTCGACTTCTATGTTTGCGAATTTTGTACCAATGATTCATCTAAGCCCTGA
- Protein Sequence
- MASKVKGKARQAWDKSAMADALKAVREKTMGFLKASKTYGVPKTTLLRLTKTENKSLCDITNLKLGRKSTLPTELEDELSNYILEMEKSGFGLTRRDIRSLAYQLAKKNNIEHSFSEAKESAGRTWLRLFLKRHPNLSFRRPTGTSTSRMKGFNKENVNAFFDLLESCMNEFQYSATNVYNVDETGISIVPSKMPEILALKGKKQIGTATSAERGSTITCVICMSAGGTFIPPMLIFPRKRDNPLLMKGAPPGSIHACHPSRWIQFQLFTQWFEHFLQHVKPTATSPVLLVLDGHASHTRNIKVVDLARKNHVSLLSLPPHSSHKIQPLDKTFMGPLKKYLTEEIRKRVRMQPQAATHYDIAELFGQAYIRAQRAELAINGFRATGIYSINRNVFEDYDFIDDDCPVVEESVNDPPRDRITPVIENGDNNFPAALEALEAHSTPISTLTFDESHLPNLQSKEPTTTLNDSVAGSSTSARIYLSPKVLQPIPRLKKTVSNRGRKATKSVILTSSPYKRDLETSIKRKEESDKLKKKRPLNIKNKSKKAPKKKSIISKYKDSSSETSNQSDYLVDDSTDESPDRSQNENAKCLYCHGLFSEDVHGEKWIQCASCRRWAHEDCAGIEDVVDFYVCEFCTNDSSKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00987779;
- 90% Identity
- iTF_00987779; iTF_00987786; iTF_00988030; iTF_00987813; iTF_00987802; iTF_00987806;
- 80% Identity
- -