Basic Information

Insect: Meloe dianella
Gene Symbol: RREB1
Assembly: GCA_028455855.1
Location: JAPTHL010000047.1:4033973-4042240[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.014 0.83 9.8 0.7 1 23 135 157 135 157 0.98

2 15 0.00036 0.021 14.8 0.4 1 23 174 196 174 196 0.98

3 15 5.1e-05 0.0031 17.5 6.4 1 23 202 224 202 224 0.98

4 15 0.013 0.8 9.9 2.0 2 23 337 359 336 359 0.96

5 15 0.56 34 4.8 0.9 1 20 405 424 405 426 0.91

6 15 0.061 3.7 7.8 0.1 1 23 569 591 569 591 0.96

7 15 6.9e-06 0.00041 20.2 0.8 1 23 600 622 600 622 0.99

8 15 0.0012 0.072 13.2 2.3 1 23 628 651 628 651 0.97

9 15 0.00042 0.025 14.6 3.0 1 23 1049 1072 1049 1072 0.97

10 15 0.00047 0.028 14.5 0.5 2 23 1278 1299 1277 1299 0.97

11 15 0.11 6.4 7.1 6.3 1 23 1305 1328 1305 1328 0.97

12 15 0.011 0.64 10.2 1.2 1 20 1372 1392 1372 1393 0.95

13 15 0.12 7.2 6.9 1.2 1 23 1460 1483 1460 1483 0.94

14 15 0.014 0.85 9.8 0.4 3 23 1542 1562 1540 1562 0.93

15 15 0.0063 0.38 10.9 5.9 1 23 1568 1590 1568 1590 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.014	0.83	9.8	0.7	1	23	135	157	135	157	0.98
2	15	0.00036	0.021	14.8	0.4	1	23	174	196	174	196	0.98
3	15	5.1e-05	0.0031	17.5	6.4	1	23	202	224	202	224	0.98
4	15	0.013	0.8	9.9	2.0	2	23	337	359	336	359	0.96
5	15	0.56	34	4.8	0.9	1	20	405	424	405	426	0.91
6	15	0.061	3.7	7.8	0.1	1	23	569	591	569	591	0.96
7	15	6.9e-06	0.00041	20.2	0.8	1	23	600	622	600	622	0.99
8	15	0.0012	0.072	13.2	2.3	1	23	628	651	628	651	0.97
9	15	0.00042	0.025	14.6	3.0	1	23	1049	1072	1049	1072	0.97
10	15	0.00047	0.028	14.5	0.5	2	23	1278	1299	1277	1299	0.97
11	15	0.11	6.4	7.1	6.3	1	23	1305	1328	1305	1328	0.97
12	15	0.011	0.64	10.2	1.2	1	20	1372	1392	1372	1393	0.95
13	15	0.12	7.2	6.9	1.2	1	23	1460	1483	1460	1483	0.94
14	15	0.014	0.85	9.8	0.4	3	23	1542	1562	1540	1562	0.93
15	15	0.0063	0.38	10.9	5.9	1	23	1568	1590	1568	1590	0.98

Sequence Information

Coding Sequence: ATGCAAGGCGTTGTCTTCATGCCCCAAAATCCGCAACAAGGCTCGCCGCCACCAAATAACACTATAGTTACCGATATTACAACAATGGAAACATCATCTGAGCCAAATGATTTAACCAAAGAAAATAATAATAACAAACAACAATTAAATAACCAAAGTAATAATAATAATAATAATAATAATCAGAACGACTCAGGCATTTATTCTACAACAAATTCAACGATGAATAGTGAATCACCGATGGATACATCAACAAATACAACGATAAATTCAGATAATTGTGATAATAATTACGATAATCGCAGTGATTGTAGTACAACACCACCACCACCAACAACAACAACAACAACAACACTACAAGATGAAGACGTCCAACAACAACAACATGAACAACAGAAACGTTACATATGTCCGATTTGTGATAAATTATTATTATCACAACACGAATTTACATTACATATACGTTCACATAATAATGAAACAATAACTGAATTTAATAATGATAATAATGATAAAGGTTTTACATGTCGCATATGTTATAAAGTATTAAGTTCAAGTTCTAGTTTAGATCGACATGTTTTAGTACATAGTGGTGAAAGACCATTTCATTGTAAATATTGTGGTGATACATTTACAACAAATGGTAATATGCACCGACATATGCGTACACATTCAaataataataatattatcaataataataataataaatttgataattatgaatctgatggtagtgttgatagtaatattagtacaaattcaaaaagcatagaatttaataataacaataataataacaatgttgataaacgtatgtcgagaaagcgtaaattagagaatgatgatgatgatgatgatatcgatgataattatgatgataatcaacaacaacaatatgaggatgaacaacaaaattataaATGTCCAGTATGTGAACGTAACGATTTTATTTCATTAAATATATTAGAAACACATTTAGAAGATAATCATCCCGATTATCCTGTTAAATGTAATCAATGTAATCAATTATTTCCAAATCATAAAATGTTAACAATACATCGTACAACAATACACGATAGTAATCAAATGAAACATCATGTTTTCGGTTTTAAAGATTTAACATTTGTTGATTTTTCTAGTGAGAAATTTCCACATATTGCACGTTATGAATGTGAAAAGAATTTACATAAAGTTAATAGTGGTTTACGTTTTCAATGTCGTAAATGTTCAAGAGCATTCCCATGTTCAAATTCATTAGAAATACATGAAAACGATTGTATTTTAAATGATAATAATAATGGTTTAGATTTAACAAAAACAACACAATTATCAGAGACTGATATAAAGAGGAATGAATTCTTTTCAAGATTAAATTTACAAGATAACTCACCGGAGAAATCCACATCACCACCTCCACAACAACAACAACAACAATTACATGAAACTTCAACGAAATTGCGTCAACAATTATTAGCGAACGCAATTAATATGGAAACAACAAAAGATTTAGCTGATATACAATCAATAATATCGATGACAACAAATGGTAGTTTATTACAACAACTACAAACGAAAAACGATATTGTTGCAAATAACAAACAACAACAACAAGAAGATTTTAATAATCGTCAAGACCAACAGGAGGAAGAATCACAAGATATATTTGCTGTGGAATTTCGTAAAATGAAATTACGTGGCGAATTTCCATGTCGTTTATGTACAGCTGTATTTCCAAATTTACGTGCATTAAAAGGCCATAATCGTGCCCATTTAAATGGTAATAATAATGGTATGTATCGTTGTAATATGTGTCCACATTCATCAATTGATAAGGCAGCATTAATACGTCATATGCGCACACATAATGGTGATCGTCCATATGAATGTGCATTATGCAATTATGCATTTACAACAAAAGCAAATTGTGAACGGCATTTAAGGAATCGTCATGCGAAATCGACACGTGATGAAGTGAAAAAATCAATCATCTATCATCCATCTGAGGATCCGACCAATGAAGATTTAAATAAATTAGCACGCGACGAAAGAAAATTGAATACATTATCGTCATCAGGTGGTGATAGTGATTTATCACCACAGGAAAAGCTCGGAAGTAAACGTAATAATATTAATAATAATAATAATAATAATAACGAGATATTTATACCGAATTTATTAAAAGAATCTTTACAAAAAGACACACCGAAAGTTTTCCATCATAATATCAGCGATATTATACGGAATGAAAATTTGAAATCATTAAAAGATCATAGTAGCGATAATGGACAATTATCACCATATCTTCAATCGTACAATTTCTCACCGAACAGTACAAACATATCAACACCAACACATTTAACATCAAAAATACAAGTGAAACGATTGGAAGTCTTAAAAGAACCAAATTATGATGAAACACATTCAGATTCTGATAATAATGAACAAGAAGATGAGCCAATGGTATTAGATTTGAGTAAAAAGAGAATTGATCAGGATGAACGAACAATTCCAGAAGATCTATCAAGAAAATCATCACCGCCATTACCACAGCCACCAACATCATTATTATTACCAACAACAACACCAACACCAACAACACCAACACAATTAAATATGAGTGAAATTTTTGCTCAGCAATTATTAAAAACACCACCGAAAATTGATCCAGCTGCACTATATGCAACACAATTAGCATTAGCTAGAAATAGTTTTTCTAGTTTTGCTAATTGGCCTGGTTTTCCAATAAATCATTTTTTATTTCAATCATTACAAACCCCAATTCTACCACAAGATACACAAGATATTAAAGAACGTTTACAACGTTATCAATTATGTGGTGGTGGTAATTTAATTACTGATAATTTCACTGAACGCTTAAAGAATTTACAAAATTTCCCCAACTATAAATTACGGGAAACTAACGAGAATTTGAGTCCGAAACAGATTGACGATATAACACCATTAAATATTGATACAAATTATAATGAGAATTTAAATGTTAATCTACAAAGTCCGGTAGCAACAAAACAACAACAACAACAACAAGAGCTAGTTCAATCGCCGAATTCTGTTAAAATGGTGATAAAAAATGGTGTTTTAATGCCAAAACAGAAACAACGCCGTTATAGAACTGAACGACCATTTACATGTGAACATTGTTCAGCTAGATTTACATTACGTTCAAATATGGAACGTCATATAAAACAACAACATCCACAATTTTGGTCACAACGACAACGCGGACTTAGTACACCTGGACGTAAAATTCAGACCACACCTGTTAAAAATTATTGTGATATTAATGTACCGAATTATGAATCACAAAAGAATGCCGATATTGATGATACAACAATTAAAACAGAACAAATTGAAGAAAAATTGAAATTCGCATTATTATCACAACATTTACAATCGAACAATGATATTATTAAAAAAGAAGAAGAAGATGATTGTGCTTTGATTATTGATGATAATCTTGAAAAGAATCAAATAGATAAAAGTCGTATTTTAGAGGAGAAACTCAAAGAATTCCATGCTAAACATCATGATAATATTAATAAATTGATAAAACAAGAAGAAAATCAAGATTTAGTGCCAGTTTCTAGATTGCTAGACAATGCTTCCCAACAACAATTCAAAGAATATTTCAAGAGAGAAGGTGAAGAACAGGAAACTGGCGGCGGCAGTGAGGAAGATGAAGAAGGCTTGATTGCCAGTGGTAGTACTAGTGAGGGCAATATTTCCGGTACTGACGAAAATAGATCTGAATCGGAAGCTCCACCACCGGTTAAGAAGAAATCGGCGTATTCAATGGCACCGAATCGTGTCAGTTGTCCGTTTTGTAGTCGAAAATTTCCGTGGAGTTCATCATTACGTCGCCATATATTGACACATACAGGTCAAAAACCGTTTAAATGCAGCCATTGTCCGTTATTATTCACAACAAAATCGAATTGCGACCGtcatttattgaggaaacatggtaatgcagctactacgataatcaatgatattactaacaataataataataataataataataataacaataataatagtaatagtaataatgcgaattatttgatgagaaacgttcccgaacgtccatTCAAATGTTCAAATTGTCCAAGCAGTACATTTTCGACATATTCAAATTTAAAAAAACATATCAGCTGCAAACATTCAACAAATGCTCAAGGTGATGATATCCGTGCCCAAGGATATGAAGCTGGTAGTTCTGAGGATGAGAAGATCTCCACTGAATTCATCCAACAACAACCACAACAAAAAACTACCAATGAATGGAATGATAATCATCATATGAATCATATCAAAAATGAACAGCAAATTGTCCAAAATTCTGATCTACCATTCAAATGTCATCTGTGTGATAATTCATTTGGTGAACGTCGAGACGCTTTAGATCATATCAAAGAGAAGCATTTTTCCGAATATGATTTATTAATGTCGAAGAATGCATTAGATAATAATGCAACATTAACAGCATCcaataatagtacaacaacaacaacaacaacaacagcagatgatcatcatgaggatgatgagaatgatattcgTGGTAAATTTCCAGATTATTCAAATCGCAAAGTGATTTGTGCATTTTGTATGCGTCGCTTTTGGTCTGCCGAAGATTTACGTAGACATATGCGTACACATACAGGTGAACGACCATTCAGTTGTGATATATGTCGGAGACGATTCACATTAAAACACAGTATGTTACGGCatcgtaaaaaacacaatgttaattttgataatgacaatggtaataatagtgatgatgataataatCCAATTAATTTGGAGAAATACAGTAAAGGTCTCACTACAACTACGGCTGATGGTGATAACATGAAACATGGCGATAGAACTGAAGAATCTGATGGTAATGAGGGTGGTGATTTAATTAGTAATCTATTAGGCATCCGGGATCGTTCATTTATCGATAAAGTCTTAACAGCATCCCCTGATGATGTGGCTAAACTATTGGGGGTCAAAAACGGTATTAAAGAATAA
Protein Sequence: MQGVVFMPQNPQQGSPPPNNTIVTDITTMETSSEPNDLTKENNNNKQQLNNQSNNNNNNNNQNDSGIYSTTNSTMNSESPMDTSTNTTINSDNCDNNYDNRSDCSTTPPPPTTTTTTTLQDEDVQQQQHEQQKRYICPICDKLLLSQHEFTLHIRSHNNETITEFNNDNNDKGFTCRICYKVLSSSSSLDRHVLVHSGERPFHCKYCGDTFTTNGNMHRHMRTHSNNNNIINNNNNKFDNYESDGSVDSNISTNSKSIEFNNNNNNNNVDKRMSRKRKLENDDDDDDIDDNYDDNQQQQYEDEQQNYKCPVCERNDFISLNILETHLEDNHPDYPVKCNQCNQLFPNHKMLTIHRTTIHDSNQMKHHVFGFKDLTFVDFSSEKFPHIARYECEKNLHKVNSGLRFQCRKCSRAFPCSNSLEIHENDCILNDNNNGLDLTKTTQLSETDIKRNEFFSRLNLQDNSPEKSTSPPPQQQQQQLHETSTKLRQQLLANAINMETTKDLADIQSIISMTTNGSLLQQLQTKNDIVANNKQQQQEDFNNRQDQQEEESQDIFAVEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRAHLNGNNNGMYRCNMCPHSSIDKAALIRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHAKSTRDEVKKSIIYHPSEDPTNEDLNKLARDERKLNTLSSSGGDSDLSPQEKLGSKRNNINNNNNNNNEIFIPNLLKESLQKDTPKVFHHNISDIIRNENLKSLKDHSSDNGQLSPYLQSYNFSPNSTNISTPTHLTSKIQVKRLEVLKEPNYDETHSDSDNNEQEDEPMVLDLSKKRIDQDERTIPEDLSRKSSPPLPQPPTSLLLPTTTPTPTTPTQLNMSEIFAQQLLKTPPKIDPAALYATQLALARNSFSSFANWPGFPINHFLFQSLQTPILPQDTQDIKERLQRYQLCGGGNLITDNFTERLKNLQNFPNYKLRETNENLSPKQIDDITPLNIDTNYNENLNVNLQSPVATKQQQQQQELVQSPNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQFWSQRQRGLSTPGRKIQTTPVKNYCDINVPNYESQKNADIDDTTIKTEQIEEKLKFALLSQHLQSNNDIIKKEEEDDCALIIDDNLEKNQIDKSRILEEKLKEFHAKHHDNINKLIKQEENQDLVPVSRLLDNASQQQFKEYFKREGEEQETGGGSEEDEEGLIASGSTSEGNISGTDENRSESEAPPPVKKKSAYSMAPNRVSCPFCSRKFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNAATTIINDITNNNNNNNNNNNNNNSNSNNANYLMRNVPERPFKCSNCPSSTFSTYSNLKKHISCKHSTNAQGDDIRAQGYEAGSSEDEKISTEFIQQQPQQKTTNEWNDNHHMNHIKNEQQIVQNSDLPFKCHLCDNSFGERRDALDHIKEKHFSEYDLLMSKNALDNNATLTASNNSTTTTTTTTADDHHEDDENDIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNVNFDNDNGNNSDDDNNPINLEKYSKGLTTTTADGDNMKHGDRTEESDGNEGGDLISNLLGIRDRSFIDKVLTASPDDVAKLLGVKNGIKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01366559;
90% Identity: -
80% Identity: -