Basic Information

Insect: Meloe dianella
Gene Symbol: salm
Assembly: GCA_028455855.1
Location: JAPTHL010000060.1:4643373-4646489[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 9.2 5.5e+02 1.0 0.0 2 23 7 28 6 28 0.84

2 15 0.31 19 5.6 0.8 1 21 554 574 554 577 0.88

3 15 3.4 2.1e+02 2.3 0.0 2 23 658 680 657 680 0.91

4 15 0.01 0.61 10.3 2.2 1 23 688 710 688 710 0.98

5 15 4.9e-05 0.0029 17.6 1.4 2 23 713 734 712 734 0.97

6 15 0.00027 0.016 15.2 1.4 1 23 740 762 740 762 0.98

7 15 1.4e-05 0.00083 19.3 3.6 2 23 769 790 768 791 0.95

8 15 3.4 2.1e+02 2.3 1.9 6 23 805 822 803 822 0.94

9 15 8.1e-05 0.0049 16.9 3.4 2 23 828 850 827 850 0.96

10 15 0.11 6.9 7.0 0.1 2 23 866 886 865 886 0.95

11 15 2.1e-05 0.0012 18.7 1.8 1 20 892 911 892 914 0.93

12 15 0.00015 0.009 16.0 0.2 1 23 922 944 922 944 0.99

13 15 6.5e-05 0.0039 17.2 3.6 1 23 950 972 950 972 0.98

14 15 3.5e-07 2.1e-05 24.3 3.2 1 23 978 1000 978 1000 0.98

15 15 0.0011 0.066 13.3 7.0 1 23 1006 1028 1006 1029 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	9.2	5.5e+02	1.0	0.0	2	23	7	28	6	28	0.84
2	15	0.31	19	5.6	0.8	1	21	554	574	554	577	0.88
3	15	3.4	2.1e+02	2.3	0.0	2	23	658	680	657	680	0.91
4	15	0.01	0.61	10.3	2.2	1	23	688	710	688	710	0.98
5	15	4.9e-05	0.0029	17.6	1.4	2	23	713	734	712	734	0.97
6	15	0.00027	0.016	15.2	1.4	1	23	740	762	740	762	0.98
7	15	1.4e-05	0.00083	19.3	3.6	2	23	769	790	768	791	0.95
8	15	3.4	2.1e+02	2.3	1.9	6	23	805	822	803	822	0.94
9	15	8.1e-05	0.0049	16.9	3.4	2	23	828	850	827	850	0.96
10	15	0.11	6.9	7.0	0.1	2	23	866	886	865	886	0.95
11	15	2.1e-05	0.0012	18.7	1.8	1	20	892	911	892	914	0.93
12	15	0.00015	0.009	16.0	0.2	1	23	922	944	922	944	0.99
13	15	6.5e-05	0.0039	17.2	3.6	1	23	950	972	950	972	0.98
14	15	3.5e-07	2.1e-05	24.3	3.2	1	23	978	1000	978	1000	0.98
15	15	0.0011	0.066	13.3	7.0	1	23	1006	1028	1006	1029	0.96

Sequence Information

Coding Sequence: ATGGATTCGAGTAATATTGTTTGTCCAGTGTGCACTTTATATTTGAGAGCTGGGATAACATTGAAGAGCCATTTAGCCAGCCATCCTAAACATAAAGTAATTGAGGCGTTGGTCCGACTAGCTGATCCTGAAGAACTTGAGAAAGATGCATCATGTCCTTCATCATCAGTGATAACAACAGAAACAACAACAACACCTCCAACAACACAACCACAACAACAACAACAAACTGTTACTTGTCCACAAGGTAATAGTGGAAATTCGCAAATCAATATAGTTAATCAAACATGGAATCAAGGCAGTTTAGTGAATATGCCCCCGAATGTACCACAAATGCAGGGCAATCATCTGTTTATTTATCAACAAAGTATGAGCAGTACAACCGGCTCACCACAGAATGTGCTCAATGTTAATCCATTATCACAACAATATGTAATTCCGACTGTATTAAATCCGCAAATGATGCCCTATGTTTATCAACAACAACAAGTGATTATGTCGAGTGGTTCGTGTTTATCATCACCATTACGGTCGTTACCATATGAAGTACAATCAGCAACAATAGCAACATCATCATCAAATCCCGATCAGATTTCGAATTCTAATAATATCATTGAAATCAGTGACGAATCACCGAAAAATCAAGAATGTTCTACTGATACAATTGTAAATGAAGATTCATCtaatgatactagtgataaacaagagaaaaatattacaataaaagatgatattgatttacaaaagttacatacatcaattgatttgaaattctatgaagaaaataatgataatgatgatgatgatcatgattgtgatgatgatgatggtgatgatgaaacaacaaatccaccaccacgttcaccaactggttCTGATTGGAGTATACGTGTTAGATCTGATTTAAGTAAAGCATGTCAAACACAAAACAATAATTTATCACCAAGATCAATAATACAAAATGATAATATTGATATTGTTGAAATTGATACAACAAAACCTGATGAACCGGAATTTTATTTTGTtgatgcatccgatcaacaagaacaacaaacaactaatgatgatggtgatgatgatgatgataatagtaataataataatagtagtaataatactgtgataatatcacaagattatgaACAATCAAATCCAATTTATACAACATCAAATATTTTACAAACAAATGATCATTTAGATTTTGTTGATATGGATGGTATGCAAATGGTAATGAATGATTTCTCAACGAATCAAATAATATCGCAAGTTGAAAATTTCGAAGGTAGTACACCAGATCGTCCTGGTGTATTAATGACAATTGGTGGTATGGTTGATGATAATCATGATGAATCATTATCAAGAGAAAGTTCAAATGTTAATATACGTGCTGATGAACGTATGCCACCTAGAGGTGAATTATCAGGACAAGAAAGTATAGATGGTACCACAAATGATACAACATGGAATCGTATACAATATGATAATGGTAATTCATCATATGATAATATATTTACAAGAGAAAATTGGGGTGGTTCAGATAGTTCAAATATTGATATACCACCACCATTACAAAGTCGTATACCACAACCATATGTTGAACAAGATAATGATGATAATGATATGCCAACAATTGTTAGTTTCAGTGGCCCACCGTTGAATTTTAAATGCTCAACATGCGGTGATGCCTTTCAATCATCAAAAGAACGTAAACAACATGAAATTGATAATCATGGTGATAAACTTAAATTAAATCATATTGGTACAGAAATTGGTAAGAAGAAAGTTAAAAAATTAGTTGTTAAATTGAAAGAAACTAAAAGTGAAAATGATAACAATTTTGATAATGTCTTTACAAATAAATTGAAAATTGAAAATACGATTAATAATGACAATGGTGAAATGCAAACAAATAATCAAAATGAAACTCTACCAACAAAAGTCGATGAAAGTGTTACTGTTGATATAAAGACAGTTTGTTCGTTGTGTGAAGCTGTTTTACCAAATATACGAGCATTACGTGATCATAAATTACAAATTCATAATATATCATCACAGACACGTCATAAATGTGCAACGTGCAATGAAGTATTTCAAAATGATTATAAATTTTCGGAACATTTACGTATACATCCGCTTGAAtgtaaattatgtgggaaattattttatcgtcgacaaaatatccaattacatatgcgtcgtcatttaggtataaaaccgtataaatgtgatgtatgtgagaaatcatttttaaccaaacagaaattacaagaacatcgaaacatacatacaggcgaggcaccaattaaatgtaatttatgtaatgaaacatttCGACGCTATTCGAATTTAGTACAACATCGCAATCGTCATCATTTGAACGTTAAAAAGAAAGTTAAAGATTATATATGTTTCTGTAAAGAGATATTCCATTCGAAAACGAAATTAGCATGGCATAAAGAGATACATGATCCGAAACCGAAATCATGTACACAATGTAGTGAGAAATTCATACATATGTCGAGTTTAACAAGACATATGCGTCGTGCCCATAACAGTCATTTCCTACCAAACGGTCATAAAAGTTCTGAAAATGTTGAATGTCCAATTTGTAAAGGTATTTATCTAAAATCATCACTTGAAGTACATATAAAAAACCACAGTGGCCAACGTCCATATAAATGTTTAATTTGCAATAAGACATTTACAACAAGATGGAATTTGAAATTGCATAAATGGACGCATGCTTCACGTGTATCAAAACCATTCAAATGTGACCAATGTAAAGGTGCATTTATACGTGAATCGGATTATGTTGCACATATGAATTCTCATAAAAGTATACGACCGTATACATGTAATTATTGTGGTGCTAAATTTATAAGAAAGTCTAATTGTCAAAGACATGTTAGAGAGCATGAGAACgataaaacgtttacgtgtaaggtatgcggtaaagcattccatcgttcgtattatttaaaagatcatatgagaatccatacaggcgtacgaccgtattcgtgtcatatttgtggtaaaacatcaacaacaaaatcaaatcacaataagcatgtacagatacatCATGCTAGAGAACCAGTGAGCACAGAAAATTAA
Protein Sequence: MDSSNIVCPVCTLYLRAGITLKSHLASHPKHKVIEALVRLADPEELEKDASCPSSSVITTETTTTPPTTQPQQQQQTVTCPQGNSGNSQINIVNQTWNQGSLVNMPPNVPQMQGNHLFIYQQSMSSTTGSPQNVLNVNPLSQQYVIPTVLNPQMMPYVYQQQQVIMSSGSCLSSPLRSLPYEVQSATIATSSSNPDQISNSNNIIEISDESPKNQECSTDTIVNEDSSNDTSDKQEKNITIKDDIDLQKLHTSIDLKFYEENNDNDDDDHDCDDDDGDDETTNPPPRSPTGSDWSIRVRSDLSKACQTQNNNLSPRSIIQNDNIDIVEIDTTKPDEPEFYFVDASDQQEQQTTNDDGDDDDDNSNNNNSSNNTVIISQDYEQSNPIYTTSNILQTNDHLDFVDMDGMQMVMNDFSTNQIISQVENFEGSTPDRPGVLMTIGGMVDDNHDESLSRESSNVNIRADERMPPRGELSGQESIDGTTNDTTWNRIQYDNGNSSYDNIFTRENWGGSDSSNIDIPPPLQSRIPQPYVEQDNDDNDMPTIVSFSGPPLNFKCSTCGDAFQSSKERKQHEIDNHGDKLKLNHIGTEIGKKKVKKLVVKLKETKSENDNNFDNVFTNKLKIENTINNDNGEMQTNNQNETLPTKVDESVTVDIKTVCSLCEAVLPNIRALRDHKLQIHNISSQTRHKCATCNEVFQNDYKFSEHLRIHPLECKLCGKLFYRRQNIQLHMRRHLGIKPYKCDVCEKSFLTKQKLQEHRNIHTGEAPIKCNLCNETFRRYSNLVQHRNRHHLNVKKKVKDYICFCKEIFHSKTKLAWHKEIHDPKPKSCTQCSEKFIHMSSLTRHMRRAHNSHFLPNGHKSSENVECPICKGIYLKSSLEVHIKNHSGQRPYKCLICNKTFTTRWNLKLHKWTHASRVSKPFKCDQCKGAFIRESDYVAHMNSHKSIRPYTCNYCGAKFIRKSNCQRHVREHENDKTFTCKVCGKAFHRSYYLKDHMRIHTGVRPYSCHICGKTSTTKSNHNKHVQIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01022449;
90% Identity: iTF_00987336;
80% Identity: iTF_00987336;