Mdia011745.1
Basic Information
- Insect
- Meloe dianella
- Gene Symbol
- -
- Assembly
- GCA_028455855.1
- Location
- JAPTHL010000047.1:2085988-2088234[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.34 20 5.5 1.3 1 23 98 120 98 120 0.96 2 15 0.24 15 5.9 0.8 2 20 126 144 125 146 0.91 3 15 7.3e-06 0.00044 20.2 3.0 1 23 158 180 158 180 0.97 4 15 0.00022 0.013 15.5 0.2 3 23 185 206 184 206 0.92 5 15 0.00056 0.034 14.2 5.5 1 23 215 237 215 237 0.98 6 15 0.39 23 5.3 0.1 1 23 242 264 242 264 0.95 7 15 0.001 0.062 13.4 2.9 1 23 270 292 270 292 0.97 8 15 1.6e-05 0.00094 19.1 0.6 1 23 295 318 295 318 0.95 9 15 0.0011 0.065 13.3 0.8 1 23 327 349 327 349 0.98 10 15 0.025 1.5 9.0 4.3 3 19 358 374 356 380 0.91 11 15 0.0002 0.012 15.6 4.3 2 23 391 413 390 413 0.96 12 15 0.2 12 6.2 4.8 1 23 421 443 421 443 0.94 13 15 6e-05 0.0036 17.3 1.5 1 23 450 473 450 473 0.95 14 15 2.7e-06 0.00016 21.5 5.9 1 23 479 501 479 501 0.98 15 15 1.9e-05 0.0012 18.8 3.8 1 23 507 530 507 530 0.96
Sequence Information
- Coding Sequence
- ATGAGACATCTACGTATACCGGGACAAAATTTAAAGAATTTGTCCACTTTTAAAAGCCAAATTACAAATATTATAAGAGAAATTAATAAATTCGATGATAATCATAAAAACGAAGCGATCTCCCATATACAGGATTGTGTCAAAAATGAGCCGAGTTGTAGTAAAACAACAGCCACCATAGAAGCATCCCCAAAGAAACGTTTATTCAAATATCAATTAAGACAACGCTTACGCAATGGGAAGATTTTAATGAATGATAAAACAAGCAAACATCGAAAAAAAGCGCAATTGTACAGATGTAAAGTGTGTAATGTTAGTGACAAATCAAAATTGAAGATGTTGAAACATTTAGAAACACACATTGACGCACCATTATCATGTTTAAGGTGTCGAAAAACTTTCAATGGGAATATCTCTTACAAATGGCATACAATACATTATTGTAAACCAAAACAAGTTAATGTTTATAAATTCAAATGTAATCAATGCAGTAAGAAATTCTCAACAAAACGTACTCTAGAGAGTCATCTACAAGGGCACAAACGCAACAATTGCACCTATTGCGATAAAGTGATAACGAGACGTGTACAATTAATTAAACATTTAATAGATGAACATTCAATCAAATTAGAACGGCACACACATCGCTGTAATACGTGTGAAAAAAGTTATATAAAACGACGTAGTCTATTTTATCATATGAGACAACATGCGCCTGGTAAATATGTTTGTTTAGAATGTGGTGAAATTAATGATACAGTTGAGAATTATGAGAATCATAAGAAACAACATGATGTTTTGAAATTATTCACATGTCAAAGATGCAATGAGAAATTCTCAAAACGTTCCCAATATTTAATACATTTAACTCAACATGATCGTTACAAATGTAATACGTGTGATGAAACATTTGCATCTCGCGATAATATCATGCGACATAAACAATTAGGGCATGATATTGAAGGTTTAAATCGACGATATGTTTGTCCACAATGTCGAGCAACATTTTCAAATGATAATCGTTTATTTATGCATCTGCGACAACATTCTGGTGATTCACGTACAATTAACTGTAAATATTGCAAGAAAACATTCAGTTCATTTTATGCTTATTATAAGCATTGTAGTACGATTTTCCATGAGAAATGTAGTCCAGAGATGAATGATATTACTTGTAAATTATGTGGTAAACATTTTACAAAAAAATACGTATTAAATCAACATATACATCGTGTACATAATAAATATTCACACGAATCATACAAATGTCAACATTGCAACTATGAAACACATAGTAAAGGGAATATTTTACGACATTCATCTTTACATTTCCGTCAAAACAATAATTTTACATGTGAATATTGTGGTAAAACATGTGATAATGTTGCAAGTTTAAAAGATCACATCTCATACAATCATTTACAGGAGAAACAATTCCATTGTGAAAAATGTAAGAAATCATTTAAACGCAATTCAGAATTAGTGCGACATCGTAAAAGTCATTCAGATGAACGTCCATATATTTGTACGAATTGTGGTAAAAATTATAAACGTTTAACACATTTAAAACGTCATGAACAATCAACACATCAAATTATACAACAAACTCGACGTATTCAAAATGTGTTGACAGAAGATAATAAAATTACTGTTGAAACAACAACAAGAACAACAAATGAAAACATTTTCATATTACAATCGTATACAATTAAAAATGATGATGATGTTAAAATAATTAATGTTGAAAATAGTGATAATTTATTTTTAACAATTCCAGATAATAATGATATTAAAGGGGAGGATCATTTGATGAGTACATTTACACCTGAAAAGAATTGGGGAATTGAACCGGATTTATATAAATATTATAATGATGTACCTATGCCATTTGAAAAAGATGAATTATAG
- Protein Sequence
- MRHLRIPGQNLKNLSTFKSQITNIIREINKFDDNHKNEAISHIQDCVKNEPSCSKTTATIEASPKKRLFKYQLRQRLRNGKILMNDKTSKHRKKAQLYRCKVCNVSDKSKLKMLKHLETHIDAPLSCLRCRKTFNGNISYKWHTIHYCKPKQVNVYKFKCNQCSKKFSTKRTLESHLQGHKRNNCTYCDKVITRRVQLIKHLIDEHSIKLERHTHRCNTCEKSYIKRRSLFYHMRQHAPGKYVCLECGEINDTVENYENHKKQHDVLKLFTCQRCNEKFSKRSQYLIHLTQHDRYKCNTCDETFASRDNIMRHKQLGHDIEGLNRRYVCPQCRATFSNDNRLFMHLRQHSGDSRTINCKYCKKTFSSFYAYYKHCSTIFHEKCSPEMNDITCKLCGKHFTKKYVLNQHIHRVHNKYSHESYKCQHCNYETHSKGNILRHSSLHFRQNNNFTCEYCGKTCDNVASLKDHISYNHLQEKQFHCEKCKKSFKRNSELVRHRKSHSDERPYICTNCGKNYKRLTHLKRHEQSTHQIIQQTRRIQNVLTEDNKITVETTTRTTNENIFILQSYTIKNDDDVKIINVENSDNLFLTIPDNNDIKGEDHLMSTFTPEKNWGIEPDLYKYYNDVPMPFEKDEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01022439;
- 90% Identity
- -
- 80% Identity
- -